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2024-05-03 11:23:17

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Candidatus Pelagibacter ubique HTCC1062, HTCC1062

Number of genes found: 49

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Candidatus Pelagibacter ubique HTCC1062, HTCC1062
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAR11_0866 mannitol transporterchromosome CDS835182 1326 + 0.335596
NA SAR11_1289 short chain dehydrogenasechromosome CDS1224047 756 + 0.279101
NA SAR11_0427 Thioesterase superfamily proteinchromosome CDS414886 522 - 0.273946
NA SAR11_1018 Methyltransferase FkbMchromosome CDS997089 774 - 0.20155
NA SAR11_0764 possible deoxygenasechromosome CDS741093 834 + 0.31295
NA SAR11_0854 Fumarylacetoacetate (FAA) hydrolase family proteinchromosome CDS824061 777 - 0.263835
NA SAR11_0848 Predicted ABC-type transport system proteinchromosome CDS817687 2529 - 0.272044
NA SAR11_0869 short chain dehydrogenasechromosome CDS838936 747 + 0.330656
NA SAR11_0264 mannitol transporterchromosome CDS265128 1362 - 0.339941
NA SAR11_0850 probable ATP-binding component of ABC transporterchromosome CDS820208 666 - 0.294294
NA SAR11_0865 TRAP-type mannitol/chloroaromatic compound transport systemchromosome CDS834637 546 + 0.313187
NA SAR11_0531 FabG-like proteinchromosome CDS523831 780 + 0.30641
NA SAR11_0558 Cyclopropane-fatty-acyl-phospholipidchromosome CDS551827 702 + 0.232194
NA SAR11_0677 hypothetical proteinchromosome CDS660441 537 + 0.256983
NA SAR11_0555 CMAS familychromosome CDS548924 612 + 0.196078
NA SAR11_0533 methyltransferasechromosome CDS526036 774 - 0.202842
NA SAR11_0530 cyclopropane-fatty-acyl-phospholipid synthase (CMAS family)chromosome CDS522650 1182 + 0.222504
NA SAR11_0767 short chain dehydrogenasechromosome CDS743871 747 + 0.323963
NA SAR11_1290 TRAP-type bacterial extracellular solute-binding proteinchromosome CDS1224850 1077 - 0.381616
NA SAR11_0082 probable short-chain dehydrogenasechromosome CDS97348 753 + 0.286853
NA SAR11_0846 short chain dehydrogenasechromosome CDS815628 750 + 0.309333
NA SAR11_0393 Putative SAM-dependent methyltransferasechromosome CDS385353 696 + 0.20977
NA SAR11_1226 methyltransferasechromosome CDS1171170 570 - 0.207018
NA SAR11_0265 mannitol transporterchromosome CDS266479 585 - 0.34359
NA SAR11_0773 short chain dehydrogenasechromosome CDS749914 762 + 0.314961
NA SAR11_0445 possible Methyltransferase FkbMchromosome CDS440311 771 - 0.203632
NA SAR11_0266 TRAP dicarboxylate transporter-DctP subunit (mannitol/chloroaromatic compounds)chromosome CDS267155 1158 - 0.394646
NA SAR11_0861 short chain dehydrogenasechromosome CDS829950 777 + 0.33462
NA SAR11_0674 short chain dehydrogenasechromosome CDS658050 762 - 0.312336
NA SAR11_0856 short chain dehydrogenasechromosome CDS825622 759 - 0.304348
NA SAR11_1339 Asp/Glu/Hydantoin racemase familychromosome CDS1276409 747 - 0.291834
NA SAR11_0304 short chain dehydrogenasechromosome CDS300899 672 + 0.33631
acpP SAR11_0708 Acyl carrier protein (ACP)chromosome CDS691701 240 + 0.3375
acuC SAR11_0460 histone deacetylase family proteinchromosome CDS454433 930 - 0.303226
crtI SAR11_0120 phytoene dehydrogenasechromosome CDS129473 1458 + 0.301783
dctM SAR11_1292 TrapT familychromosome CDS1226064 1332 - 0.344595
dctQ SAR11_1293 Tripartite ATP-independent periplasmicchromosome CDS1227395 510 - 0.286275
dsbA SAR11_0822 2-hydroxychromene-2-carboxylate isomerase family protein (HCCA Isomerase)chromosome CDS795290 585 - 0.266667
fabB SAR11_0396 3-oxoacyl-[acyl-carrier-protein] synthasechromosome CDS387383 1212 - 0.363861
fabG SAR11_0707 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS690915 738 + 0.285908
fadD SAR11_0248 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases IIchromosome CDS250536 1629 - 0.320442
frnE SAR11_0295 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesischromosome CDS294521 618 + 0.276699
hpaG SAR11_0779 fumarylacetoacetate hydrolase family proteinchromosome CDS755889 846 + 0.308511
hpcE SAR11_0776 2-hydroxyhepta-2,4-diene-1,7-dioateisomerase/5-c arboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxychromosome CDS753242 843 + 0.309609
metW SAR11_0218 methionine biosynthesis proteinchromosome CDS219455 597 + 0.261307
smtA SAR11_0528 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) familychromosome CDS520922 660 + 0.280303
stc SAR11_0273 transcriptional regulatorchromosome CDS275137 1083 + 0.308403
ucpA SAR11_0775 oxidoreductasechromosome CDS752477 744 + 0.330645
yrbC SAR11_0036 hypothetical proteinchromosome CDS41060 594 + 0.274411