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2024-05-17 09:24:37

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Escherichia coli O157:H7 EDL933, EDL933

Number of genes found: 89

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Escherichia coli O157:H7 EDL933, EDL933
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Z3393 putative 1,2-dioxygenaseSubName: Full=Putative 1,2-dioxygenase; SubName: Full=Putative gentisate 1,2-dioxygenase; chromosome CDS3033320 1029 - 0.555879
NA Z1545 putative fatty acyl chain reductaseSubName: Full=Putative fatty acyl chain reductase; chromosome CDS1439630 756 + 0.513228
NA Z4865 putative beta-ketoacyl-ACP reductaseSubName: Full=Putative 3-oxoacyl-(Acyl-carrier-protein) reductase; SubName: Full=Putative beta-ketoacyl-ACP reductase; chromosome CDS4412836 732 + 0.565574
NA Z1533 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS1424754 792 + 0.421717
NA Z1547 putative acyl-carrier proteinSubName: Full=Putative acyl carrier protein; SubName: Full=Putative acyl-carrier protein; chromosome CDS1440959 282 + 0.407801
NA Z4863 putative 3-oxoacyl-[ACP] synthaseSubName: Full=Putative 3-oxoacyl-(Acyl-carrier-protein) synthase II; SubName: Full=Putative 3-oxoacyl-[ACP] synthase; chromosome CDS4411206 1170 + 0.603419
NA Z2714 orf, hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2440130 411 - 0.515815
NA Z3392 putative isomerase-decarboxylaseSubName: Full=Putative isomerase; SubName: Full=Putative isomerase-decarboxylase; chromosome CDS3032604 702 - 0.551282
NA Z4353 putative enzymeSubName: Full=Putative enzyme; chromosome CDS3954523 927 - 0.512406
NA Z4854 putative acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome CDS4403106 252 + 0.488095
NA Z2249 SubName: Full=Uncharacterized protein; chromosome CDS2034368 156 - 0.532051
NA Z0233 unknownSubName: Full=Putative biotin synthesis protein; SubName: Full=Uncharacterized protein; chromosome CDS235330 771 + 0.490272
NA Z5352 putative enzymeRecName: Full=Putative carboxymethylenebutenolidase; EC=3.1.1.45; AltName: Full=Dienelactone hydrolase; Short=DLH; chromosome CDS4880427 882 - 0.531746
NA Z0969 unknown protein encoded by prophage CP-933KSubName: Full=Uncharacterized protein; chromosome CDS912131 276 + 0.521739
NA Z2250 putative N-hydroxyarylamine O-acetyltransferaseSubName: Full=Putative N-hydroxyarylamine O-acetyltransferase; SubName: Full=Uncharacterized protein; chromosome CDS2034478 735 - 0.512925
NA Z1963 SubName: Full=Uncharacterized protein; chromosome CDS1782294 645 - 0.536434
NA Z5618 D-glucitol-6-phosphate dehydrogenaseSubName: Full=D-glucitol-6-phosphate dehydrogenase; chromosome CDS5111561 807 - 0.51425
NA Z4853 putative acyl carrier proteinSubName: Full=Putative acyl carrier protein; chromosome CDS4402837 258 + 0.523256
NA Z1549 putative beta-ketoacyl-[acyl carrier protein] synthaseSubName: Full=Putative 3-oxoacyl-[acyl-carrier-protein] synthase synthase; SubName: Full=Putative beta-ketoacyl-[acyl carrier protein] synthase; chromosome CDS1442510 2559 + 0.535365
NA Z1918 putative membrane protein of prophage CP-933XSubName: Full=Putative membrane protein of prophage CP-933X; chromosome CDS1741294 2922 + 0.545859
NA Z3703 orf, hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3348165 507 - 0.573964
NA Z5111 RecName: Full=Tir chaperone; chromosome CDS4668305 471 - 0.348195
NA Z2286 putative membrane transport proteinSubName: Full=Putative membrane transport protein; chromosome CDS2066573 1230 + 0.531707
NA Z1550 SubName: Full=Uncharacterized protein; chromosome CDS1445073 1224 + 0.527778
NA Z1510 putative synthetaseRecName: Full=Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB; EC=3.5.1.110; AltName: Full=Ureidoacrylate amidohydrolase; chromosome CDS1396763 735 - 0.556463
NA Z4866 putative beta-ketoacyl-ACP synthaseSubName: Full=Putative 3-oxoacyl-(Acyl-carrier-protein) synthase II; SubName: Full=Putative beta-ketoacyl-ACP synthase; chromosome CDS4413564 1230 + 0.549594
NA Z1925 unknown protein encoded by prophage CP-933XSubName: Full=Uncharacterized protein; chromosome CDS1747627 669 - 0.406577
NA Z4850 putative O-methyltransferaseSubName: Full=Putative O-methyltransferase; chromosome CDS4400223 1059 + 0.458924
NA Z0894 SubName: Full=Putative glutamate mutase L; SubName: Full=Uncharacterized protein; chromosome CDS852979 1389 - 0.530598
NA Z1942 putative isomeraseSubName: Full=Putative isomerase; chromosome CDS1760972 660 + 0.524242
aas Z4154 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetaseRecName: Full=Bifunctional protein Aas; Includes: RecName: Full=2-acylglycerophosphoethanolamine acyltransferase; EC=2.3.1.40; AltName: Full=2-acyl-GPE acyltransferase; AltName: Full=Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase; Includes: RecName: Full=Acyl-[acyl-carrier-protein] synthetase; EC=6.2.1.20; AltName: Full=Acyl-ACP synthetase; AltName: Full=Long-chain-fatty-acid--[acyl-carrier-protein] ligase; chromosome CDS3763553 2160 - 0.520833
acpP Z1733 acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; AltName: Full=Cytosolic-activating factor; Short=CAF; AltName: Full=Fatty acid synthase acyl carrier protein; chromosome CDS1595796 237 + 0.476793
bioC Z0996 biotin biosynthesis; reaction prior to pimeloyl CoARecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; chromosome CDS935540 756 + 0.56746
caiC Z0043 probable crotonobetaine/carnitine-CoA ligaseRecName: Full=Probable crotonobetaine/carnitine-CoA ligase; EC=6.2.1.-; chromosome CDS40678 1569 - 0.506055
cchA Z3713 detox proteinSubName: Full=Detox protein; chromosome CDS3358187 336 - 0.574405
cchB Z3712 detox proteinSubName: Full=Detox protein; chromosome CDS3357793 288 - 0.534722
entA Z0738 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesisSubName: Full=2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; SubName: Full=2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis; chromosome CDS709803 747 + 0.576975
entB Z0737 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismataseRecName: Full=Isochorismatase; EC=3.3.2.1; AltName: Full=2,3 dihydro-2,3 dihydroxybenzoate synthase; AltName: Full=Enterobactin synthase component B; AltName: Full=Enterochelin synthase B; AltName: Full=Isochorismate lyase; chromosome CDS708946 858 + 0.552448
entC Z0735 isochorismate hydroxymutase 2, enterochelin biosynthesisRecName: Full=Isochorismate synthase EntC; EC=5.4.4.2; AltName: Full=Isochorismate mutase; chromosome CDS706137 1176 + 0.562925
entD Z0723 enterobactin synthetase component DRecName: Full=4-phosphopantetheinyl transferase EntD; EC=2.7.8.-; AltName: Full=Enterobactin synthase component D; AltName: Full=Enterochelin synthase D; chromosome CDS690897 630 - 0.487302
entE Z0736 2,3-dihydroxybenzoate-AMP ligaseRecName: Full=Enterobactin synthase component E; AltName: Full=Enterochelin synthase E; Includes: RecName: Full=2,3-dihydroxybenzoate-AMP ligase; EC=2.7.7.58; AltName: Full=Dihydroxybenzoic acid-activating enzyme; Includes: RecName: Full=S-dihydroxybenzoyltransferase; EC=2.3.1.-; chromosome CDS707322 1611 + 0.556176
entF Z0727 ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F)RecName: Full=Enterobactin synthase component F; EC=2.7.7.-; AltName: Full=Enterochelin synthase F; AltName: Full=Serine-activating enzyme; AltName: Full=Seryl-AMP ligase; chromosome CDS695595 3882 + 0.561824
fabB Z3586 3-oxoacyl-[acyl-carrier-protein] synthase ISubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; chromosome CDS3236704 1221 - 0.560197
fabF Z1734 3-oxoacyl-[acyl-carrier-protein] synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II; AltName: Full=Beta-ketoacyl-ACP synthase II; Short=KAS II; chromosome CDS1596120 1242 + 0.531401
fabG Z1732 3-oxoacyl-[acyl-carrier-protein] reductaseSubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; chromosome CDS1594851 735 + 0.512925
fadD Z2848 acyl-CoA synthetase, long-chain-fatty-acid--CoA ligaseRecName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; AltName: Full=Long-chain acyl-CoA synthetase; Short=Acyl-CoA synthetase; chromosome CDS2565094 1686 - 0.515421
hcaA2 Z3810 small terminal subunit of phenylpropionate dioxygenaseRecName: Full=3-phenylpropionate/cinnamic acid dioxygenase subunit beta; EC=1.14.12.19; AltName: Full=Digoxigenin subunit beta; chromosome CDS3460729 519 + 0.526012
hcaB Z3813 2,3-dihydroxy-2,3-dihydrophenylpropionatedehydro genaseRecName: Full=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase; EC=1.3.1.87; AltName: Full=2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; AltName: Full=3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate dehydrogenase; AltName: Full=CI-dihydrodiol dehydrogenase; AltName: Full=Cis-3-(2-carboxyethenyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase; AltName: Full=Cis-3-(2-carboxyethyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase; AltName: Full=PP-dihydrodiol dehydrogenase; chromosome CDS3461564 813 + 0.558426
hdhA Z2624 NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acidsRecName: Full=7-alpha-hydroxysteroid dehydrogenase; Short=7-alpha-HSDH; EC=1.1.1.159; chromosome CDS2372189 768 - 0.472656
kduD Z4162 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; chromosome CDS3772197 762 - 0.519685
menE Z3520 o-succinylbenzoate-CoA ligaseSubName: Full=O-succinylbenzoate-CoA ligase; chromosome CDS3174117 1356 - 0.561209
menF Z3525 isochorismate hydroxymutase 2, menaquinone biosynthesisSubName: Full=Isochorismate hydroxymutase 2, menaquinone biosynthesis; chromosome CDS3179817 1071 - 0.537815
mhpD Z0448 2-keto-4-pentenoate hydrataseRecName: Full=2-keto-4-pentenoate hydratase; EC=4.2.1.80; AltName: Full=2-hydroxypentadienoic acid hydratase; chromosome CDS430717 810 + 0.555556
mhpF Z0450 acetaldehyde dehydrogenaseRecName: Full=Acetaldehyde dehydrogenase; EC=1.2.1.10; AltName: Full=Acetaldehyde dehydrogenase [acetylating]; chromosome CDS431523 951 + 0.546793
smtA Z1268 S-adenosylmethionine-dependentmethyltransferaseSubName: Full=S-adenosylmethionine-dependent methyltransferase; chromosome CDS1192402 786 + 0.515267
srlD Z4012 glucitol (sorbitol)-6-phosphate dehydrogenaseSubName: Full=Glucitol (Sorbitol)-6-phosphate dehydrogenase; chromosome CDS3618956 780 + 0.523077
sufI Z4371 suppressor of ftsIRecName: Full=Cell division protein FtsP; Flags: Precursor; chromosome CDS3968922 1413 - 0.564048
tauD Z0467 taurine dioxygenase, 2-oxoglutarate-dependentSubName: Full=Taurine dioxygenase; SubName: Full=Taurine dioxygenase, 2-oxoglutarate-dependent; chromosome CDS448799 852 + 0.542253
tehB Z2288 tellurite resistanceSubName: Full=Tellurite resistance; chromosome CDS2068811 594 - 0.461279
ucpA Z3691 putative oxidoreductaseRecName: Full=Oxidoreductase UcpA; EC=1.-.-.-; chromosome CDS3336951 858 - 0.534965
yacK Z0133 orf, hypothetical proteinRecName: Full=Blue copper oxidase CueO; AltName: Full=Copper efflux oxidase; Flags: Precursor; chromosome CDS141456 1551 + 0.541586
yafS Z0237 orf, hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS238349 741 + 0.492578
ybbA Z0648 putative ATP-binding component of a transport systemRecName: Full=Uncharacterized ABC transporter ATP-binding protein YbbA; chromosome CDS613224 687 + 0.569141
ybbO Z0646 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS611831 810 - 0.546914
ybbP Z0649 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS613907 2415 + 0.578468
ybdB Z0739 orf, hypothetical proteinRecName: Full=Proofreading thioesterase EntH; EC=3.1.2.-; AltName: Full=Enterobactin synthase component H; chromosome CDS710552 414 + 0.582126
ycaC Z1243 orf, hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1165267 627 - 0.45933
yciK Z2539 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2257357 759 + 0.517787
ydgB Z2606 putative oxidoreductaseRecName: Full=Dihydrofolate reductase FolM; Short=DHFR; EC=1.5.1.3; chromosome CDS2356063 723 + 0.507607
ydiD Z2730 putative ligase/synthetaseSubName: Full=Putative ligase/synthetase; chromosome CDS2457892 1701 + 0.499118
ydjB Z2802 orf, hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2527375 660 + 0.528788
yebH Z2866 putative enzymeSubName: Full=Putative enzyme; chromosome CDS2583287 810 - 0.509877
yecD Z2920 orf, hypothetical proteinRecName: Full=Uncharacterized isochorismatase family protein YecD; EC=3.-.-.-; chromosome CDS2627937 600 + 0.52
yecO Z2923 orf, hypothetical proteinRecName: Full=tRNA (cmo5U34)-methyltransferase; EC=2.1.1.-; chromosome CDS2629840 744 + 0.50672
yecP Z2924 putative enzymeRecName: Full=tRNA (mo5U34)-methyltransferase; EC=2.1.1.-; chromosome CDS2630580 972 + 0.516461
yeiN Z3422 orf, hypothetical proteinRecName: Full=Pseudouridine-5-phosphate glycosidase; Short=PsiMP glycosidase; EC=3.2.-.-; chromosome CDS3063625 939 - 0.490948
ygcW Z4085 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS3686903 861 - 0.457607
yghA Z4356 putative oxidoreductaseRecName: Full=Uncharacterized oxidoreductase YghA; EC=1.-.-.-; chromosome CDS3957332 885 + 0.542373
yhbL Z4573 sigma cross-reacting protein 27A (SCRP-27A)SubName: Full=Sigma cross-reacting protein 27A; SubName: Full=Sigma cross-reacting protein 27A (SCRP-27A); chromosome CDS4159375 663 - 0.523379
yhiQ Z4897 orf, hypothetical proteinRecName: Full=Ribosomal RNA small subunit methyltransferase J; EC=2.1.1.242; AltName: Full=16S rRNA m2G1516 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase; chromosome CDS4443917 753 - 0.589641
yigI Z5341 orf, hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4869304 486 - 0.522634
yjcS Z5683 orf, hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5187282 1998 - 0.523524
yjgI Z5861 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS5358863 714 - 0.540616
yohF Z3386 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS3026689 762 - 0.543307
yojI Z3469 putative ATP-binding component of a transport systemSubName: Full=Putative ATP-binding component of a transport system; chromosome CDS3111228 1644 - 0.532847
yrbC Z4555 orf, hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4146825 636 - 0.523585
yrbD Z4556 orf, hypothetical proteinRecName: Full=Probable phospholipid ABC transporter-binding protein MlaD; chromosome CDS4147479 552 - 0.498188
yrbE Z4557 orf, hypothetical proteinRecName: Full=Probable phospholipid ABC transporter permease protein MlaE; chromosome CDS4148035 783 - 0.551724
yrbF Z4558 putative ATP-binding component of a transport systemRecName: Full=Probable phospholipid import ATP-binding protein MlaF; EC=3.6.3.-; chromosome CDS4148825 810 - 0.546914