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2024-04-28 23:23:14

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Colwellia psychrerythraea 34H, 34H; BAA-681

Number of genes found: 105

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Colwellia psychrerythraea 34H, 34H; BAA-681
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CPS_0989 conserved hypothetical proteinchromosome CDS1003611 558 - 0.369176
NA CPS_2691 amidohydrolase family proteinchromosome CDS2799533 1572 - 0.398219
NA CPS_1403 C4-dicarboxylate transporter family protein, DctQ subunitchromosome CDS1442483 525 - 0.358095
NA CPS_2000 conserved hypothetical proteinchromosome CDS2070163 774 + 0.392765
NA CPS_0130 C4-dicarboxylate transporter family protein, DctQ subunitchromosome CDS135956 522 + 0.37931
NA CPS_2111 putative methyltransferasechromosome CDS2197158 969 - 0.400413
NA CPS_3629 amidohydrolase family proteinchromosome CDS3768046 1293 - 0.406032
NA CPS_3096 thiopurine S-methyltransferase family proteinchromosome CDS3227758 639 + 0.384977
NA CPS_2047 4-hydroxyphenylacetate-3-hydroxylase family proteinchromosome CDS2120511 1530 - 0.392157
NA CPS_1748 hypothetical proteinchromosome CDS1793016 756 - 0.403439
NA CPS_2720 3-hydroxyacyl-CoA dehydrogenasechromosome CDS2838681 768 + 0.4375
NA CPS_2677 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2787907 777 - 0.392535
NA CPS_2928 conserved hypothetical proteinchromosome CDS3062718 675 - 0.346667
NA CPS_0771 isochorismatase family proteinchromosome CDS789454 951 + 0.38591
NA CPS_1382 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS1422641 756 + 0.398148
NA CPS_3727 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS3887551 840 + 0.436905
NA CPS_4421 hypothetical proteinchromosome CDS4662106 1161 + 0.384152
NA CPS_0268 putative Xaa-Pro dipeptidasechromosome CDS272252 1356 - 0.386431
NA CPS_1175 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS1198691 726 - 0.389807
NA CPS_0535 amidohydrolase family proteinchromosome CDS532046 2019 + 0.383853
NA CPS_1411 toluene tolerance family proteinchromosome CDS1452858 666 + 0.358859
NA CPS_4535 putative membrane proteinchromosome CDS4788050 777 - 0.420849
NA CPS_1281 metallo-beta-lactamase family protienchromosome CDS1318228 1908 - 0.396751
NA CPS_0138 conserved hypothetical proteinchromosome CDS146362 819 + 0.423687
NA CPS_3024 oxidoreductase, short-chain dehydrogenase/reductase family, truncatedchromosome CDS3163411 363 + 0.371901
NA CPS_0665 putative 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS664915 828 + 0.421498
NA CPS_0516 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS515464 735 - 0.370068
NA CPS_2772 conserved hypothetical proteinchromosome CDS2893040 231 + 0.333333
NA CPS_1402 putative C4-dicarboxylate transporter family protein, DctM subunitchromosome CDS1441206 1281 - 0.367682
NA CPS_0131 C4-dicarboxylate transporter family protein, DctM subunitchromosome CDS136477 1281 + 0.393443
NA CPS_0935 putative polyhydroxyalkanoate depolymerasechromosome CDS939721 1032 + 0.40407
NA CPS_1348 putative Xaa-Pro dipeptidasechromosome CDS1387811 1305 - 0.414559
NA CPS_1265 C4-dicarboxylate transporter family protein, DctQ subunitchromosome CDS1298064 549 + 0.384335
NA CPS_4426 hypothetical proteinchromosome CDS4666266 696 - 0.41954
NA CPS_3630 amidohydrolase family proteinchromosome CDS3769347 1578 - 0.399873
NA CPS_4005 carboxymethylenebutenolidase family proteinchromosome CDS4202738 738 + 0.418699
NA CPS_4259 AMP-binding proteinchromosome CDS4488598 1626 + 0.405904
NA CPS_4533 toluene tolerance family proteinchromosome CDS4786711 774 - 0.381137
NA CPS_2169 hypothetical proteinchromosome CDS2272907 564 - 0.328014
NA CPS_4536 ABC transporter, ATP-binding proteinchromosome CDS4788853 804 - 0.399254
NA CPS_1404 extracellular solute-binding protein, family 7chromosome CDS1443118 1077 - 0.38533
NA CPS_1680 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1725262 756 - 0.373016
NA CPS_1266 putative C4-dicarboxylate transporter family protein, DctM subunitchromosome CDS1298615 1389 + 0.390929
NA CPS_0702 fumarylacetoacetate hydrolase family proteinchromosome CDS707870 654 + 0.373089
NA CPS_3094 thioesterase family proteinchromosome CDS3226098 420 + 0.447619
NA CPS_0129 extracellular solute-binding protein, family 7chromosome CDS134739 1089 + 0.383838
NA CPS_3373 histone deacetylase family proteinchromosome CDS3502304 903 + 0.353267
NA CPS_1655 histone deacetylase family proteinchromosome CDS1704235 954 - 0.42348
NA CPS_2520 conserved hypothetical proteinchromosome CDS2624065 600 - 0.391667
NA CPS_4789 beta-ketoacyl-ACP synthase family proteinchromosome CDS5070496 1896 + 0.412447
NA CPS_1666 metallo-beta-lactamase family proteinchromosome CDS1714283 2043 - 0.418502
NA CPS_1191 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS1216995 738 - 0.380759
NA CPS_2074 Xaa-Pro dipeptidasechromosome CDS2150151 1302 - 0.410906
NA CPS_1608 putative 3-oxoacyl-(acyl-carrier protein) reductasechromosome CDS1654971 771 + 0.402075
NA CPS_2158 glucose 1-dehydrogenasechromosome CDS2264802 753 - 0.436919
NA CPS_1239 DsbA-like thioredoxin domain proteinchromosome CDS1272721 660 + 0.406061
NA CPS_2596 biotin biosynthesis protein bioCchromosome CDS2699672 798 + 0.354637
NA CPS_1662 benzoate transporterchromosome CDS1711012 1179 - 0.398643
NA CPS_1678 conserved hypothetical proteinchromosome CDS1724142 354 - 0.370057
NA CPS_3085 amidohydrolase family proteinchromosome CDS3215291 2085 - 0.397602
NA CPS_2310 ABC transporter, permease proteinchromosome CDS2408430 2511 + 0.397053
NA CPS_0690 hypothetical proteinchromosome CDS694954 618 + 0.372168
NA CPS_3306 methyltransferase, UbiE/COQ5 familychromosome CDS3428922 822 - 0.406326
NA CPS_4396 hypothetical proteinchromosome CDS4631227 825 + 0.380606
NA CPS_4534 mce family proteinchromosome CDS4787489 474 - 0.377637
NA CPS_1616 isochorismatase family proteinchromosome CDS1664074 753 - 0.398406
NA CPS_2922 hypothetical proteinchromosome CDS3057958 681 - 0.377386
NA CPS_1264 extracellular solute-binding protein, family 7chromosome CDS1296642 1065 + 0.389671
NA CPS_2771 AMP-binding proteinchromosome CDS2891253 1794 + 0.398551
NA CPS_4155 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS4367341 816 + 0.392157
NA CPS_0824 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS838732 768 + 0.394531
NA CPS_2309 ABC transporter, ATP-binding domainchromosome CDS2407727 714 + 0.403361
NA CPS_3763 fumarylacetoacetate hydrolase family proteinchromosome CDS3927831 990 - 0.40202
NA CPS_3409 isochorismatase family proteinchromosome CDS3538606 552 - 0.36413
NA CPS_2112 putative methyltransferasechromosome CDS2198407 735 - 0.371429
NA CPS_3345 acid-CoA ligase family proteinchromosome CDS3472300 1644 - 0.377737
NA CPS_2873 conserved hypothetical proteinchromosome CDS3006415 900 - 0.386667
NA CPS_4918 Asp/Glu/hydantoin racemasechromosome CDS5208561 807 - 0.418835
NA CPS_4797 hypothetical proteinchromosome CDS5084256 894 + 0.409396
NA CPS_2843 putative tellurite resistance proteinchromosome CDS2972018 585 - 0.389744
NA CPS_2457 hypothetical proteinchromosome CDS2577192 576 + 0.333333
NA CPS_4308 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS4536677 693 + 0.40404
NA CPS_2729 N-acetyltransferase family proteinchromosome CDS2847739 822 + 0.33455
NA CPS_2155 AMP-binding proteinchromosome CDS2261258 1797 + 0.41291
NA CPS_4153 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS4365474 822 + 0.381995
NA CPS_0661 AMP-binding enzyme family proteinchromosome CDS660899 1563 - 0.426104
NA CPS_2526 putative permeasechromosome CDS2629912 2484 - 0.381643
acoR CPS_3048 acetoin catabolism regulatory proteinchromosome CDS3183913 1977 - 0.379363
acpP CPS_2298 acyl carrier proteinchromosome CDS2397760 234 + 0.350427
bdhA1 CPS_0943 D-beta-hydroxybutyrate dehydrogenasechromosome CDS952016 813 - 0.416974
bdhA2 CPS_4091 D-beta-hydroxybutyrate dehydrogenasechromosome CDS4305144 777 - 0.370656
elbB CPS_4610 enhancing lycopene biosynthesis protein 2chromosome CDS4866514 657 - 0.39726
fabB CPS_3807 3-oxoacyl-(acyl-carrier-protein) synthase Ichromosome CDS3972671 1212 - 0.405116
fabF CPS_2299 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS2398417 1239 + 0.422922
fabG CPS_2297 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS2396853 747 + 0.389558
fadD1 CPS_1189 long-chain-fatty-acid--CoA ligasechromosome CDS1215202 1656 + 0.394324
fadD2 CPS_3427 long-chain-fatty-acid--CoA ligasechromosome CDS3562424 1641 - 0.396709
hutI CPS_0911 imidazolonepropionasechromosome CDS911672 1257 + 0.416866
pfaA CPS_3104 polyunsaturated fatty acid synthase PfaAchromosome CDS3240957 8316 - 0.419432
pfaB CPS_3103 polyunsaturated fatty acid synthase PfaBchromosome CDS3238255 2703 - 0.401036
pfaC CPS_3102 polyunsaturated fatty acid synthase PfaCchromosome CDS3231913 6051 - 0.410841
phbB1 CPS_2625 acetoacetyl-CoA reductasechromosome CDS2729096 747 + 0.444444
phbB2 CPS_4092 acetoacetyl-CoA reductasechromosome CDS4306609 723 + 0.401107
rrmA CPS_3174 ribosomal RNA large subunit methyltransferase Achromosome CDS3306578 834 + 0.354916
tehB CPS_2619 tellurite resistance protein TehBchromosome CDS2724428 567 + 0.410935