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2024-05-05 20:50:13

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978

Number of genes found: 143

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Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSPPH_0956 WbbDchromosome CDS1135374 1581 + 0.545225
NA PSPPH_1664 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1926706 765 + 0.619608
NA PSPPH_4145 toluene tolerance ABC transporter, ATP-binding protein, putativechromosome CDS4730393 810 - 0.579012
NA PSPPH_4073 conserved hypothetical proteinchromosome CDS4655418 732 - 0.534153
NA PSPPH_1910 pyoverdine synthetase, thioesterase componentchromosome CDS2215735 747 + 0.627845
NA PSPPH_1924 pyoverdine sidechain peptide synthetase II, D-Asp-L-Thr componentchromosome CDS2243032 7941 + 0.613903
NA PSPPH_4547 polyketide synthetase domain proteinchromosome CDS5183494 2295 - 0.529848
NA PSPPH_4311 fatty acid desaturasechromosome CDS4924295 1137 - 0.576957
NA PSPPH_4883 fumarylacetoacetate hydrolase family proteinchromosome CDS5552829 666 - 0.615616
NA PSPPH_4696 non-ribosomal peptide synthetasechromosome CDS5329307 3552 - 0.608953
NA PSPPH_3672 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS4219140 741 + 0.604588
NA PSPPH_3932 glucose 1-dehydrogenase, putativechromosome CDS4492617 762 - 0.641732
NA PSPPH_3484 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS4024021 855 + 0.57076
NA PSPPH_3734 siderophore biosynthesis protein, putativechromosome CDS4281479 645 + 0.631008
NA PSPPH_2384 isochorismatase family proteinchromosome CDS2765335 759 + 0.552042
NA PSPPH_1072 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1262334 711 - 0.576653
NA PSPPH_0032 DOPA 4,5-dioxygenase-related proteinchromosome CDS38331 333 + 0.594595
NA PSPPH_2337 sigma-54 dependent transcriptional regulatorchromosome CDS2710268 1932 + 0.606108
NA PSPPH_0939 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1114040 765 + 0.605229
NA PSPPH_2722 conserved domain proteinchromosome CDS3148540 156 - 0.576923
NA PSPPH_1711 conserved hypothetical proteinchromosome CDS1980352 762 + 0.636483
NA PSPPH_1988 dienelactone hydrolase family proteinchromosome CDS2337772 729 + 0.58299
NA PSPPH_3944 methyltransferase, putativechromosome CDS4507097 960 + 0.6
NA PSPPH_1614 autoinducer synthesis protein AhlIchromosome CDS1873945 681 + 0.558003
NA PSPPH_4654 smtA proteinchromosome CDS5292330 750 + 0.609333
NA PSPPH_2879 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS3326014 801 - 0.602996
NA PSPPH_4143 toluene tolerance protein Ttg2C, putativechromosome CDS4729129 468 - 0.549145
NA PSPPH_4352 histone deacetylase family proteinchromosome CDS4974394 918 + 0.598039
NA PSPPH_1235 isochorismatase family proteinchromosome CDS1441955 678 - 0.610619
NA PSPPH_1047 isochorismatase family proteinchromosome CDS1238662 738 - 0.600271
NA PSPPH_3908 2-hydroxychromene-2-carboxylate isomerase family proteinchromosome CDS4468356 648 - 0.584877
NA PSPPH_2612 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS3011149 768 - 0.571615
NA PSPPH_0415 3-oxoacyl-(acyl-carrier-protein) synthasechromosome CDS478943 1197 - 0.630744
NA PSPPH_1848 isochorismatase family proteinchromosome CDS2144223 567 + 0.594356
NA PSPPH_5090 nonribosomal peptide synthetasechromosome CDS5774836 3435 + 0.585444
NA PSPPH_0331 ubiquinone/menaquinone biosynthesis methyltransferase ubiechromosome CDS377760 627 - 0.61882
NA PSPPH_1258 3-oxoacyl-(acyl-carrier-protein) reductase, putativechromosome CDS1464646 750 - 0.617333
NA PSPPH_0244 thioesterase family proteinchromosome CDS283236 384 - 0.611979
NA PSPPH_4552 phosphopantetheine attachment site domain proteinchromosome CDS5191136 225 + 0.431111
NA PSPPH_0417 conserved hypothetical proteinchromosome CDS480615 648 - 0.609568
NA PSPPH_1750 non-ribosomal peptide synthetasechromosome CDS2038106 4113 + 0.623875
NA PSPPH_0405 N-acyl-D-amino acid deacylase family proteinchromosome CDS468142 1476 - 0.620596
NA PSPPH_2570 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2961794 861 + 0.587689
NA PSPPH_3426 conserved hypothetical proteinchromosome CDS3960642 210 - 0.509524
NA PSPPH_4545 conserved hypothetical proteinchromosome CDS5180245 1551 - 0.491296
NA PSPPH_2754 achromobactin biosynthetic protein AcsCchromosome CDS3189419 1854 + 0.591154
NA PSPPH_0909 isochorismatase family proteinchromosome CDS1083100 627 - 0.585327
NA PSPPH_3931 3-oxoacyl-(acyl-carrier-protein) reductase, putativechromosome CDS4491836 750 - 0.628
NA PSPPH_3995 conserved hypothetical proteinchromosome CDS4559857 1221 - 0.574939
NA PSPPH_2751 achromobactin biosynthetic protein AcsDchromosome CDS3185009 1785 + 0.6
NA PSPPH_1680 sigma-54 dependent transcriptional regulatorchromosome CDS1943175 1854 - 0.590615
NA PSPPH_1925 pyoverdine sidechain peptide synthetase III, L-Thr-L-Ser componentchromosome CDS2250987 6456 + 0.611834
NA PSPPH_1008 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1199646 789 - 0.623574
NA PSPPH_2186 metalloprotease, putativechromosome CDS2541290 1608 + 0.550995
NA PSPPH_1749 non-ribosomal peptide synthetasechromosome CDS2029074 9036 + 0.630035
NA PSPPH_2487 dioxygenase, TauD/TfdA familychromosome CDS2872638 840 + 0.57619
NA PSPPH_0413 3-oxoacyl-(acyl-carrier-protein) reductase, putativechromosome CDS477766 729 - 0.618656
NA PSPPH_3425 gluconate 5-dehydrogenase, putativechromosome CDS3959828 762 - 0.577428
NA PSPPH_2686 prolidase, putativechromosome CDS3109766 1260 - 0.620635
NA PSPPH_2415 lysine N6-hydroxylase/L-ornithine N5-oxygenase family proteinchromosome CDS2791579 1320 + 0.604545
NA PSPPH_0815 calcium binding hemolysin protein, putativechromosome CDS961992 15324 + 0.530932
NA PSPPH_2726 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS3151704 756 - 0.62037
NA PSPPH_4080 3-oxoacyl-(acyl-carrier-protein) reductase, putativechromosome CDS4662276 759 + 0.573123
NA PSPPH_A0110 hypothetical proteinlarge plasmid CDS94897 966 - 0.520704
NA PSPPH_1297 serine-aspartate repeat family proteinchromosome CDS1510066 369 + 0.504065
NA PSPPH_4651 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS5289664 1356 + 0.628319
NA PSPPH_2240 conserved hypothetical proteinchromosome CDS2598600 627 - 0.586922
NA PSPPH_4523 fumarylacetoacetate hydrolase family proteinchromosome CDS5155178 849 - 0.61013
NA PSPPH_2037 permease, putativechromosome CDS2389320 2517 - 0.636869
NA PSPPH_3750 non-ribosomal peptide synthetasechromosome CDS4302059 1689 + 0.528123
NA PSPPH_1997 thioesterase family proteinchromosome CDS2346272 444 + 0.603604
NA PSPPH_4546 probable amino acid activating enzyme Cj1307chromosome CDS5181948 1533 - 0.499022
NA PSPPH_2645 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS3060177 747 + 0.610442
NA PSPPH_2428 3-alpha-hydroxysteroid dehydrogenase, putativechromosome CDS2808478 768 + 0.595052
NA PSPPH_1896 Iron-regulated protein frpC, putativechromosome CDS2196206 3867 + 0.46858
NA PSPPH_4627 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS5264125 690 + 0.610145
NA PSPPH_3732 dienelactone hydrolase family proteinchromosome CDS4279484 771 + 0.60441
NA PSPPH_5061 Poly(beta-D-mannuronate) C5 epimerase 3 (Mannuronanepimerase 3)chromosome CDS5735988 1548 - 0.600129
NA PSPPH_4550 non-ribosomal peptide synthetasechromosome CDS5188640 1533 + 0.492498
NA PSPPH_0110 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS127470 765 + 0.580392
NA PSPPH_1502 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1743645 816 + 0.582108
NA PSPPH_1911 pyoverdine chromophore precursor synthetasechromosome CDS2216578 13011 + 0.632926
NA PSPPH_1923 pyoverdine sidechain peptide synthetase I, epsilon-Lys modulechromosome CDS2239721 3315 + 0.633183
NA PSPPH_2875 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS3320962 741 + 0.601889
NA PSPPH_0320 dioxygenase, TauD/TfdA familychromosome CDS364889 897 + 0.588629
NA PSPPH_2411 conserved hypothetical proteinchromosome CDS2787399 507 + 0.538462
NA PSPPH_1752 dioxygenase, TauD/TfdA familychromosome CDS2051478 861 + 0.608595
NA PSPPH_1440 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1681778 735 - 0.604082
NA PSPPH_2709 fatty acid desaturasechromosome CDS3135842 1110 + 0.604505
NA PSPPH_2897 yersiniabactin non-ribosomal peptide synthetasechromosome CDS3350681 6156 + 0.620695
NA PSPPH_3857 conserved hypothetical proteinchromosome CDS4413127 810 - 0.593827
NA PSPPH_1926 pyoverdine sidechain peptide synthetase IV, D-Asp-L-Ser componentchromosome CDS2257444 8628 + 0.618336
NA PSPPH_1808 isochorismatase family proteinchromosome CDS2111121 591 - 0.593909
NA PSPPH_0428 acyl carrier protein, putativechromosome CDS491719 261 - 0.574713
NA PSPPH_1438 Poly(beta-D-mannuronate) C5 epimerase 3 (Mannuronanepimerase 3)chromosome CDS1675793 4833 - 0.599628
NA PSPPH_4144 toluene tolerance proteinTtg2B, putativechromosome CDS4729596 798 - 0.562657
NA PSPPH_1799 benzoate transport proteinchromosome CDS2104501 1194 - 0.621441
NA PSPPH_2756 achromobactin biosynthetic protein AcsAchromosome CDS3192050 1884 + 0.583864
NA PSPPH_3421 conserved domain proteinchromosome CDS3953784 726 + 0.584022
NA PSPPH_2302 phytanoyl-CoA dioxygenase, PhyH familychromosome CDS2668585 819 + 0.593407
NA PSPPH_3438 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS3973089 687 + 0.659389
NA PSPPH_1076 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1265375 912 + 0.594298
NA PSPPH_2038 ABC transporter, ATP-binding proteinchromosome CDS2391836 684 - 0.619883
NA PSPPH_3943 methyltransferase, putativechromosome CDS4506261 840 + 0.584524
NA PSPPH_1929 pyoverdine ABC transporter, ATP-binding/permease proteinchromosome CDS2271351 1677 - 0.610018
NA PSPPH_1847 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2143359 750 - 0.617333
NA PSPPH_0427 acyl carrier protein, putativechromosome CDS491455 261 - 0.528736
NA PSPPH_2691 dienelactone hydrolase family proteinchromosome CDS3117708 888 - 0.601351
NA PSPPH_1751 non-ribosomal peptide synthetase/polyketide synthetasechromosome CDS2042218 9153 + 0.632689
NA PSPPH_1237 isochorismatase family proteinchromosome CDS1443872 1065 - 0.611268
NA PSPPH_0412 3-oxoacyl-(acyl-carrier-protein) synthase II, putativechromosome CDS476540 1227 - 0.619397
NA PSPPH_1105 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1300081 819 - 0.59707
NA PSPPH_1260 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1466610 405 + 0.553086
acpP1 PSPPH_1642 acyl carrier proteinchromosome CDS1904835 237 + 0.50211
acpP2 PSPPH_5081 acyl carrier proteinchromosome CDS5764447 237 + 0.388186
algF PSPPH_1108 alginate biosynthesis protein AlgFchromosome CDS1303716 669 - 0.596413
alkK PSPPH_1039 medium-chain-fatty-acid--CoA ligasechromosome CDS1227132 1683 + 0.58467
bdh1 PSPPH_2776 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS3214187 849 + 0.575972
bdh2 PSPPH_3985 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS4550865 726 - 0.464187
bioC PSPPH_4718 biotin biosynthesis protein BioCchromosome CDS5355251 810 - 0.617284
cumA PSPPH_1338 multicopper oxidasechromosome CDS1553502 1410 + 0.599291
elbB PSPPH_0277 enhancing lycopene biosynthesis protein 2chromosome CDS319242 669 - 0.599402
fabB PSPPH_1989 3-oxoacyl-(acyl-carrier-protein) synthase Ichromosome CDS2338788 1224 - 0.591503
fabF PSPPH_1643 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS1905200 1245 + 0.605622
fabG PSPPH_1641 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS1903900 744 + 0.576613
fadD1 PSPPH_1426 long-chain-fatty-acid--CoA ligasechromosome CDS1654652 1689 + 0.57312
fadD2 PSPPH_1427 long-chain-fatty-acid--CoA ligasechromosome CDS1656695 1692 + 0.580378
fahA PSPPH_3245 fumarylacetoacetasechromosome CDS3759934 1296 - 0.62037
fcs PSPPH_2435 feruloyl-CoA synthetasechromosome CDS2816954 1770 + 0.611864
hmgA PSPPH_3246 homogentisate 1,2-dioxygenasechromosome CDS3761226 1308 - 0.591743
hutI PSPPH_4867 imidazolonepropionasechromosome CDS5534527 1206 + 0.62272
irp1 PSPPH_2899 yersiniabactin polyketide/non-ribosomal peptide synthetasechromosome CDS3358046 9537 + 0.626612
irp3 PSPPH_2900 yersiniabactin synthetase, thiazolinyl reductase component Irp3chromosome CDS3367585 1077 + 0.62117
irp4 PSPPH_2901 yersiniabactin synthetase, thioesterase component Irp4chromosome CDS3368666 765 + 0.640523
irp5 PSPPH_2902 yersiniabactin synthetase, salycilate ligase component Irp5chromosome CDS3369443 1569 + 0.639261
iucD PSPPH_3753 siderophore biosynthesis proteinchromosome CDS4304725 1365 + 0.518681
metW PSPPH_0464 methionine biosynthesis protein MetWchromosome CDS527878 621 - 0.592593
pcaG PSPPH_2097 protocatechuate 3,4-dioxygenase, alpha subunitchromosome CDS2455736 603 + 0.605307
pcaH PSPPH_2096 protocatechuate 3,4-dioxygenase, beta subunitchromosome CDS2455005 720 + 0.590278
pchA PSPPH_2904 isochorismate synthasechromosome CDS3371344 1395 + 0.620072
pncA PSPPH_3038 pyrazinamidase/nicotinamidasechromosome CDS3529343 645 + 0.59845
rrmA PSPPH_3851 ribosomal RNA large subunit methyltransferase Achromosome CDS4407861 810 + 0.638272
ttg2D PSPPH_4142 toluene tolerance proteinchromosome CDS4728468 651 - 0.562212