Gene list
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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Xanthomonas campestris pv. campestris str. 8004, 8004
Number of genes found: 94
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| Xanthomonas campestris pv. campestris str. 8004, 8004 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | XC_3599 | ABC transporter permease | SubName: Full=ABC transporter permease; | chromosome | CDS | 4278898 | 1113 | + | 0.648697 |
| NA | XC_0429 | 3-oxoacyl-[ACP] reductase | SubName: Full=3-oxoacyl-[ACP] reductase; | chromosome | CDS | 508175 | 759 | - | 0.675889 |
| NA | XC_0087 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 100975 | 639 | + | 0.672926 |
| NA | XC_0879 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 1059197 | 816 | + | 0.672794 |
| NA | XC_3600 | ABC transporter ATP-binding protein | SubName: Full=ABC transporter ATP-binding protein; | chromosome | CDS | 4280093 | 831 | + | 0.665463 |
| NA | XC_4296 | toluene tolerance protein | SubName: Full=Toluene tolerance protein; | chromosome | CDS | 5097867 | 795 | + | 0.704403 |
| NA | XC_0922 | reductase | SubName: Full=Reductase; | chromosome | CDS | 1106044 | 831 | - | 0.65704 |
| NA | XC_4092 | 3-oxoacyl-[ACP] reductase | SubName: Full=3-oxoacyl-[ACP] reductase; | chromosome | CDS | 4821905 | 738 | - | 0.668022 |
| NA | XC_0798 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 953427 | 672 | - | 0.677083 |
| NA | XC_2691 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3239062 | 960 | - | 0.629167 |
| NA | XC_3167 | oxidoreductase | SubName: Full=Oxidoreductase; | chromosome | CDS | 3794421 | 984 | + | 0.675813 |
| NA | XC_4087 | beta-ketoacyl-[ACP] synthase II | SubName: Full=Beta-ketoacyl-[ACP] synthase II; | chromosome | CDS | 4815391 | 1197 | + | 0.711779 |
| NA | XC_3656 | copper resistance protein A precursor | SubName: Full=Copper resistance protein A; | chromosome | CDS | 4338878 | 1809 | + | 0.673853 |
| NA | XC_0512 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 604228 | 1764 | + | 0.681406 |
| NA | XC_0733 | pteridine reductase 1 | SubName: Full=Pteridine reductase 1; | chromosome | CDS | 877383 | 738 | - | 0.701897 |
| NA | XC_1527 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1836882 | 111 | - | 0.63964 |
| NA | XC_3170 | oxidoreductase | SubName: Full=Oxidoreductase; | chromosome | CDS | 3798806 | 903 | + | 0.650055 |
| NA | XC_3454 | ABC transporter ATP-binding protein | SubName: Full=ABC transporter ATP-binding protein; | chromosome | CDS | 4102706 | 603 | + | 0.708126 |
| NA | XC_0296 | oxidoreductase | SubName: Full=Oxidoreductase; | chromosome | CDS | 351078 | 255 | + | 0.678431 |
| NA | XC_2653 | imidazolonepropionase | RecName: Full=Imidazolonepropionase; EC=3.5.2.7; AltName: Full=Imidazolone-5-propionate hydrolase; | chromosome | CDS | 3192430 | 1287 | + | 0.676768 |
| NA | XC_2447 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2961028 | 774 | + | 0.664083 |
| NA | XC_3257 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3898689 | 657 | - | 0.707763 |
| NA | XC_1376 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1662499 | 756 | + | 0.674603 |
| NA | XC_2587 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3120754 | 597 | + | 0.639866 |
| NA | XC_2191 | fatty acid alpha hydroxylase | SubName: Full=Fatty acid alpha hydroxylase; | chromosome | CDS | 2637253 | 1353 | - | 0.662232 |
| NA | XC_0809 | acetoacetyl-coA reductase | SubName: Full=Acetoacetyl-coA reductase; | chromosome | CDS | 968123 | 741 | - | 0.649123 |
| NA | XC_2884 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3466837 | 648 | + | 0.677469 |
| NA | XC_4297 | toluene tolerance protein | SubName: Full=Toluene tolerance protein; | chromosome | CDS | 5098661 | 750 | + | 0.664 |
| NA | XC_2797 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 3363345 | 732 | - | 0.642076 |
| NA | XC_1617 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 1938898 | 741 | + | 0.71525 |
| NA | XC_3227 | 3-oxoacyl-[ACP] reductase | SubName: Full=3-oxoacyl-[ACP] reductase; | chromosome | CDS | 3872247 | 744 | - | 0.651882 |
| NA | XC_4101 | acyl carrier protein | SubName: Full=Acyl carrier protein; | chromosome | CDS | 4829269 | 330 | - | 0.633333 |
| NA | XC_2961 | polyketide synthase | SubName: Full=Polyketide synthase; | chromosome | CDS | 3546354 | 702 | - | 0.666667 |
| NA | XC_2555 | methyltransferase | SubName: Full=Methyltransferase; | chromosome | CDS | 3089546 | 846 | - | 0.682033 |
| NA | XC_0452 | homogentisate 1,2-dioxygenase | RecName: Full=Homogentisate 1,2-dioxygenase; Short=HGDO; EC=1.13.11.5; AltName: Full=Homogentisate oxygenase; AltName: Full=Homogentisic acid oxidase; AltName: Full=Homogentisicase; | chromosome | CDS | 538279 | 1368 | + | 0.652047 |
| NA | XC_1941 | hydrolase | SubName: Full=Hydrolase; | chromosome | CDS | 2344365 | 657 | + | 0.652968 |
| NA | XC_3455 | oxidoreductase | SubName: Full=Oxidoreductase; | chromosome | CDS | 4103305 | 2484 | + | 0.689614 |
| NA | XC_2192 | glucose 1-dehydrogenase homolog | SubName: Full=Glucose 1-dehydrogenase homolog; | chromosome | CDS | 2638821 | 879 | + | 0.650739 |
| NA | XC_1010 | fumarylacetoacetate hydrolase | SubName: Full=Fumarylacetoacetate hydrolase; | chromosome | CDS | 1222682 | 714 | - | 0.647059 |
| NA | XC_0395 | biotin synthesis protein | RecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; | chromosome | CDS | 457378 | 885 | - | 0.705085 |
| NA | XC_1111 | cytochrome P450 hydroxylase | SubName: Full=Cytochrome P450 hydroxylase; | chromosome | CDS | 1342915 | 1194 | + | 0.623116 |
| NA | XC_0365 | 3-alpha-hydroxysteroid dehydrogenase | SubName: Full=3-alpha-hydroxysteroid dehydrogenase; | chromosome | CDS | 424908 | 768 | + | 0.666667 |
| NA | XC_0436 | oxidoreductase | SubName: Full=Oxidoreductase; | chromosome | CDS | 518218 | 807 | + | 0.666667 |
| NA | XC_4262 | short chain oxidoreductase | SubName: Full=Short chain oxidoreductase; | chromosome | CDS | 5056142 | 873 | + | 0.712486 |
| NA | XC_3029 | alcohol dehydrogenase | SubName: Full=Alcohol dehydrogenase; | chromosome | CDS | 3623180 | 792 | - | 0.625 |
| NA | XC_4299 | toluene tolerance protein | SubName: Full=Toluene tolerance protein; | chromosome | CDS | 5100058 | 666 | + | 0.660661 |
| NA | XC_3692 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4379776 | 759 | - | 0.683794 |
| NA | XC_2843 | thiopurine methyltransferase | RecName: Full=Thiopurine S-methyltransferase; EC=2.1.1.67; AltName: Full=Thiopurine methyltransferase; | chromosome | CDS | 3419546 | 657 | + | 0.622527 |
| NA | XC_3225 | 3-oxoacyl-[ACP] synthase II | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 3870476 | 1236 | - | 0.639968 |
| NA | XC_3830 | tropinone reductase | SubName: Full=Tropinone reductase; | chromosome | CDS | 4526537 | 777 | - | 0.666667 |
| NA | XC_0540 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 642122 | 411 | + | 0.639903 |
| NA | XC_3652 | beta-ketoacyl-[ACP] synthase I | SubName: Full=Beta-ketoacyl-[ACP] synthase I; | chromosome | CDS | 4333097 | 1209 | + | 0.669975 |
| NA | XC_3642 | fumarylacetoacetate hydrolase | SubName: Full=Fumarylacetoacetate hydrolase; | chromosome | CDS | 4324437 | 990 | - | 0.675758 |
| NA | XC_1197 | cytochrome P450 hydroxylase | SubName: Full=Cytochrome P450 hydroxylase; | chromosome | CDS | 1454379 | 1161 | + | 0.627907 |
| NA | XC_0379 | protocatechuate 3,4-dioxygenase beta chain | SubName: Full=Protocatechuate 3,4-dioxygenase beta chain; | chromosome | CDS | 441134 | 738 | + | 0.669377 |
| NA | XC_1956 | D-beta-hydroxybutyrate dehydrogenase | SubName: Full=D-beta-hydroxybutyrate dehydrogenase; | chromosome | CDS | 2360344 | 759 | - | 0.695652 |
| NA | XC_0672 | multidrug resistance efflux pump | SubName: Full=Multidrug resistance efflux pump; | chromosome | CDS | 804911 | 1173 | - | 0.675192 |
| NA | XC_3751 | isochorismatase-like protein | SubName: Full=Isochorismatase-like protein; | chromosome | CDS | 4440612 | 552 | + | 0.655797 |
| NA | XC_2358 | 3-hydroxyacyl-CoA dehydrogenase type II | SubName: Full=3-hydroxyacyl-CoA dehydrogenase type II; | chromosome | CDS | 2848728 | 771 | + | 0.684825 |
| NA | XC_0396 | oxidoreductase | SubName: Full=Oxidoreductase; | chromosome | CDS | 458359 | 798 | - | 0.706767 |
| NA | XC_0228 | AMP-ligase | SubName: Full=AMP-ligase; | chromosome | CDS | 276047 | 1671 | + | 0.675643 |
| NA | XC_3436 | acetoin utilization family protein | SubName: Full=Acetoin utilization family protein; | chromosome | CDS | 4084567 | 909 | + | 0.683168 |
| NA | XC_2256 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2715373 | 717 | + | 0.613668 |
| NA | XC_3707 | oxidoreductase | SubName: Full=Oxidoreductase; | chromosome | CDS | 4395333 | 807 | + | 0.685254 |
| NA | XC_0835 | methyltransferase in menaquinone/biotin biosynthesis | SubName: Full=Methyltransferase in menaquinone/biotin biosynthesis; | chromosome | CDS | 1004302 | 750 | + | 0.656 |
| NA | XC_3766 | oxidoreductase | SubName: Full=Oxidoreductase; | chromosome | CDS | 4455673 | 867 | + | 0.621684 |
| NA | XC_0154 | 2-keto-4-pentenoate hydratase | SubName: Full=2-keto-4-pentenoate hydratase; | chromosome | CDS | 193113 | 822 | + | 0.664234 |
| NA | XC_1552 | carboxymethylenebutenolidase | SubName: Full=Carboxymethylenebutenolidase; | chromosome | CDS | 1866786 | 663 | - | 0.678733 |
| NA | XC_1753 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2126568 | 489 | + | 0.652352 |
| NA | XC_4298 | toluene tolerance protein | SubName: Full=Toluene tolerance protein; | chromosome | CDS | 5099519 | 543 | + | 0.655617 |
| NA | XC_3687 | Xaa-Pro dipeptidase | SubName: Full=Xaa-Pro dipeptidase; | chromosome | CDS | 4373734 | 1278 | - | 0.671362 |
| NA | XC_1521 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1831001 | 657 | + | 0.663622 |
| NA | XC_1104 | iron transporter | SubName: Full=Iron transporter; | chromosome | CDS | 1330930 | 1770 | - | 0.678531 |
| NA | XC_0380 | protocatechuate 3,4-dioxygenase alpha chain | SubName: Full=Protocatechuate 3,4-dioxygenase alpha chain; | chromosome | CDS | 441876 | 564 | + | 0.691489 |
| NA | XC_0187 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 232917 | 435 | + | 0.666667 |
| NA | XC_3226 | acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 3871852 | 240 | - | 0.566667 |
| NA | XC_3601 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4280926 | 927 | + | 0.650485 |
| NA | XC_0539 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 641646 | 477 | + | 0.658281 |
| NA | XC_4157 | oxidoreductase | SubName: Full=Oxidoreductase; | chromosome | CDS | 4900276 | 771 | + | 0.686122 |
| NA | XC_2331 | RpfB protein | SubName: Full=RpfB protein; | chromosome | CDS | 2817882 | 1683 | + | 0.625668 |
| NA | XC_2553 | biotin synthesis protein | SubName: Full=Biotin synthesis protein; | chromosome | CDS | 3087612 | 711 | - | 0.691983 |
| NA | XC_3952 | ATP-dependent serine activating enzyme | SubName: Full=ATP-dependent serine activating enzyme; | chromosome | CDS | 4665246 | 3981 | - | 0.662396 |
| NA | XC_3456 | taurine dioxygenase | SubName: Full=Taurine dioxygenase; | chromosome | CDS | 4105959 | 903 | + | 0.662237 |
| NA | XC_0595 | oxidoreductase | SubName: Full=Oxidoreductase; | chromosome | CDS | 711438 | 1587 | - | 0.669187 |
| NA | XC_3792 | short chain oxidoreductase | SubName: Full=Short chain oxidoreductase; | chromosome | CDS | 4487133 | 903 | - | 0.642303 |
| NA | XC_0161 | 2-deoxy-D-gluconate 3-dehydrogenase | SubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; | chromosome | CDS | 201482 | 756 | + | 0.674603 |
| NA | XC_0689 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 826159 | 2043 | - | 0.682819 |
| NA | XC_1821 | acetoacetyl-CoA reductase | SubName: Full=Acetoacetyl-CoA reductase; | chromosome | CDS | 2214014 | 753 | - | 0.636122 |
| NA | XC_0793 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 947894 | 1524 | - | 0.667323 |
| NA | XC_0324 | insect-type dehydrogenase | SubName: Full=Insect-type dehydrogenase; | chromosome | CDS | 382387 | 759 | + | 0.650856 |
| NA | XC_3424 | acid-CoA ligase | SubName: Full=Acid-CoA ligase; | chromosome | CDS | 4073065 | 1479 | + | 0.642326 |
| NA | XC_4158 | 2-hydroxyhepta-2,4-diene-1,7-dioateisomerase/5-c arboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase | SubName: Full=2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase/5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioatedecarboxylase; | chromosome | CDS | 4901215 | 858 | + | 0.658508 |
| NA | XC_4240 | benzoate transporter | SubName: Full=Benzoate transporter; | chromosome | CDS | 5025683 | 1185 | + | 0.681013 |
| NA | XC_0792 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 946617 | 1269 | - | 0.695823 |
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