Gene list
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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043
Number of genes found: 104
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| Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | ECA2704 | putative phenazine antibiotic biosynthesis protein | SubName: Full=Putative phenazine antibiotic biosynthesis protein; | chromosome | CDS | 3039428 | 780 | - | 0.480769 |
| NA | ECA1208 | probable short chain dehydrogenase | SubName: Full=Probable short chain dehydrogenase; | chromosome | CDS | 1375437 | 882 | + | 0.555556 |
| NA | ECA3662 | putative cytochrome | SubName: Full=Putative cytochrome; | chromosome | CDS | 4111564 | 1389 | - | 0.520518 |
| NA | ECA0483 | putative non-ribosomal peptide synthetase | SubName: Full=Putative non-ribosomal peptide synthetase; | chromosome | CDS | 557759 | 2115 | + | 0.575887 |
| NA | ECA1224 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 1392768 | 2430 | + | 0.579012 |
| NA | ECA1588 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1841727 | 384 | + | 0.486979 |
| NA | ECA2925 | probable short chain dehydrogenase | SubName: Full=Probable short chain dehydrogenase; EC=1.-.-.-; | chromosome | CDS | 3268214 | 759 | + | 0.561265 |
| NA | ECA0706 | putative degenerate non-ribosomal peptide synthetase (partial) | SubName: Full=Putative degenerate non-ribosomal peptide synthetase (Partial); Flags: Fragment; | chromosome | CDS | 774826 | 291 | - | 0.378007 |
| NA | ECA1586 | probable short chain dehydrogenase | SubName: Full=Probable short chain dehydrogenase; | chromosome | CDS | 1840176 | 759 | + | 0.562582 |
| NA | ECA2366 | fumarylacetoacetate hydrolase family protein | SubName: Full=Fumarylacetoacetate hydrolase family protein; | chromosome | CDS | 2677067 | 657 | - | 0.519026 |
| NA | ECA1101 | putative ABC transporter ATP-binding protein | SubName: Full=Putative ABC transporter ATP-binding protein; | chromosome | CDS | 1246646 | 1647 | + | 0.52459 |
| NA | ECA1979 | probable short-chain dehydrogenase | SubName: Full=Probable short-chain dehydrogenase; | chromosome | CDS | 2246565 | 834 | + | 0.533573 |
| NA | ECA4174 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4665267 | 489 | + | 0.543967 |
| NA | ECA4503 | putative acyl carrier protein | SubName: Full=Putative acyl carrier protein; | chromosome | CDS | 5044136 | 252 | - | 0.428571 |
| NA | ECA0134 | putative peptidase | SubName: Full=Putative peptidase; | chromosome | CDS | 154589 | 1083 | - | 0.633426 |
| NA | ECA4053 | putative short chain dehydrogenase | SubName: Full=Putative short chain dehydrogenase; | chromosome | CDS | 4518864 | 780 | + | 0.544872 |
| NA | ECA4128 | ABC transporter, ATP-binding protein | SubName: Full=ABC transporter, ATP-binding protein; | chromosome | CDS | 4606330 | 693 | - | 0.5671 |
| NA | ECA1487 | non-ribosomal peptide synthetase | SubName: Full=Non-ribosomal peptide synthetase; | chromosome | CDS | 1683593 | 21147 | - | 0.563059 |
| NA | ECA1488 | non-ribosomal peptide synthetase | SubName: Full=Non-ribosomal peptide synthetase; | chromosome | CDS | 1704732 | 22572 | - | 0.572834 |
| NA | ECA0705 | putative degenerate non-ribosomal peptide synthetase (partial) | SubName: Full=Putative degenerate non-ribosomal peptide synthetase (Partial); Flags: Fragment; | chromosome | CDS | 774296 | 438 | - | 0.486301 |
| NA | ECA0430 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 490305 | 831 | + | 0.493381 |
| NA | ECA2152 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2453948 | 795 | - | 0.49434 |
| NA | ECA1209 | probable short chain dehydrogenase | SubName: Full=Probable short chain dehydrogenase; | chromosome | CDS | 1376426 | 888 | + | 0.552928 |
| NA | ECA0298 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 344577 | 630 | + | 0.507937 |
| NA | ECA3341 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3750235 | 711 | - | 0.47398 |
| NA | ECA3214 | probable short chain dehydrogenase | SubName: Full=Probable short chain dehydrogenase; | chromosome | CDS | 3596586 | 756 | + | 0.511905 |
| NA | ECA3558 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 3989266 | 747 | + | 0.54083 |
| NA | ECA2018 | probable short-chain dehydrogenase | SubName: Full=Probable short-chain dehydrogenase; EC=1.-.-.-; | chromosome | CDS | 2290679 | 723 | - | 0.536653 |
| NA | ECA2058 | probable short-chain dehydrogenase | SubName: Full=Probable short-chain dehydrogenase; | chromosome | CDS | 2343795 | 735 | + | 0.557823 |
| NA | ECA2694 | putative polyketide synthetase | SubName: Full=Putative polyketide synthetase; | chromosome | CDS | 3029319 | 1785 | - | 0.503081 |
| NA | ECA3767 | probable short-chain dehydrogenase | SubName: Full=Probable short-chain dehydrogenase; | chromosome | CDS | 4207998 | 690 | + | 0.597101 |
| NA | ECA0482 | putative non-ribosomal peptide synthetase | SubName: Full=Putative non-ribosomal peptide synthetase; | chromosome | CDS | 551412 | 6351 | + | 0.570934 |
| NA | ECA0184 | putative carboxymethylenebutenolidase | SubName: Full=Putative carboxymethylenebutenolidase; EC=3.1.1.45; | chromosome | CDS | 206657 | 828 | - | 0.555556 |
| NA | ECA3127 | acyl carrier protein | SubName: Full=Acyl carrier protein; | chromosome | CDS | 3493259 | 222 | - | 0.504505 |
| NA | ECA0747 | putative short chain dehydrogenase | SubName: Full=Putative short chain dehydrogenase; | chromosome | CDS | 818265 | 741 | + | 0.578947 |
| NA | ECA1223 | putative ABC transporter ATP-binding protein | SubName: Full=Putative ABC transporter ATP-binding protein; | chromosome | CDS | 1392238 | 534 | + | 0.578652 |
| NA | ECA0054 | conserved hypothetical protein | RecName: Full=Ribosomal RNA small subunit methyltransferase J; EC=2.1.1.242; AltName: Full=16S rRNA m2G1516 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase; | chromosome | CDS | 67694 | 747 | - | 0.580991 |
| NA | ECA2383 | putative isochorismatase | SubName: Full=Putative isochorismatase; | chromosome | CDS | 2694345 | 714 | + | 0.455182 |
| NA | ECA2639 | putative hydantoinase | SubName: Full=Putative hydantoinase; | chromosome | CDS | 2967603 | 1569 | - | 0.499044 |
| NA | ECA2071 | putative cytochrome P450 | SubName: Full=Putative cytochrome P450; | chromosome | CDS | 2359589 | 1218 | - | 0.481938 |
| NA | ECA2511 | conserved hypothetical protein | RecName: Full=tRNA (cmo5U34)-methyltransferase; EC=2.1.1.-; | chromosome | CDS | 2828026 | 780 | + | 0.489744 |
| NA | ECA2215 | putative short-chain dehydrogenase | SubName: Full=Putative short-chain dehydrogenase; | chromosome | CDS | 2515094 | 708 | - | 0.556497 |
| NA | ECA1221 | probable short chain dehydrogenase | SubName: Full=Probable short chain dehydrogenase; | chromosome | CDS | 1390635 | 771 | - | 0.577173 |
| NA | ECA2928 | 3-oxoacyl-[acyl-carrier-protein] synthase II | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 3270545 | 1290 | - | 0.56124 |
| NA | ECA4494 | putative beta-ketoacyl synthase | SubName: Full=Putative beta-ketoacyl synthase; | chromosome | CDS | 5035063 | 1158 | - | 0.541451 |
| NA | ECA1738 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1984841 | 750 | + | 0.421333 |
| NA | ECA1477 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1673638 | 267 | - | 0.479401 |
| NA | ECA1544 | putative methyltransferase | SubName: Full=Putative methyltransferase; | chromosome | CDS | 1797750 | 987 | - | 0.577508 |
| NA | ECA4491 | putative beta-ketoacyl-ACP synthase | SubName: Full=Putative beta-ketoacyl-ACP synthase; | chromosome | CDS | 5032592 | 1227 | - | 0.552567 |
| NA | ECA1767 | Isochorismatase family protein | SubName: Full=Isochorismatase family protein; | chromosome | CDS | 2013994 | 585 | + | 0.473504 |
| NA | ECA3667 | putative lipoprotein | SubName: Full=Putative lipoprotein; | chromosome | CDS | 4117795 | 330 | + | 0.430303 |
| NA | ECA0295 | ABC transporter, ATP-binding protein | SubName: Full=ABC transporter, ATP-binding protein; | chromosome | CDS | 342391 | 813 | + | 0.544895 |
| NA | ECA2289 | putative short chain dehydrogenase | SubName: Full=Putative short chain dehydrogenase; | chromosome | CDS | 2595189 | 762 | + | 0.534121 |
| NA | ECA3961 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4432620 | 636 | + | 0.487421 |
| NA | ECA1857 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2111138 | 417 | + | 0.553957 |
| NA | ECA2512 | conserved hypothetical protein | RecName: Full=tRNA (mo5U34)-methyltransferase; EC=2.1.1.-; | chromosome | CDS | 2828802 | 984 | + | 0.538618 |
| NA | ECA4504 | putative acyl carrier protein | SubName: Full=Putative acyl carrier protein; | chromosome | CDS | 5044405 | 267 | - | 0.426966 |
| NA | ECA0296 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 343211 | 783 | + | 0.565773 |
| NA | ECA1486 | ABC transporter ATP-binding protein | SubName: Full=ABC transporter ATP-binding protein; | chromosome | CDS | 1681842 | 1665 | - | 0.500901 |
| NA | ECA1831 | putative methyltransferase | SubName: Full=Putative methyltransferase; | chromosome | CDS | 2077218 | 765 | + | 0.535948 |
| NA | ECA4116 | putative siderophore biosynthesis protein | SubName: Full=Putative siderophore biosynthesis protein; | chromosome | CDS | 4588636 | 1902 | - | 0.536278 |
| NA | ECA3470 | putative methyltransferase | SubName: Full=Putative methyltransferase; | chromosome | CDS | 3890504 | 771 | + | 0.560311 |
| NA | ECA2575 | putative fumarylacetoacetate hydrolase | SubName: Full=Putative fumarylacetoacetate hydrolase; | chromosome | CDS | 2905173 | 885 | - | 0.497175 |
| NA | ECA4492 | 3-oxoacyl-[acyl-carrier protein] reductase | SubName: Full=3-oxoacyl-[acyl-carrier protein] reductase; EC=1.1.1.100; | chromosome | CDS | 5033818 | 732 | - | 0.516393 |
| acpP | ECA1798 | acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 2044934 | 237 | + | 0.434599 |
| benE | ECA4471 | putative benzoate transport protein | SubName: Full=Putative benzoate transport protein; | chromosome | CDS | 5014662 | 1200 | - | 0.558333 |
| bioC | ECA2823 | biotin synthesis protein | RecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; | chromosome | CDS | 3163123 | 762 | - | 0.564304 |
| budA | ECA0740 | alpha-acetolactate decarboxylase | SubName: Full=Alpha-acetolactate decarboxylase; EC=4.1.1.5; | chromosome | CDS | 808710 | 783 | + | 0.496807 |
| budC | ECA0310 | acetoin reductase | SubName: Full=Acetoin reductase; EC=1.1.1.5; | chromosome | CDS | 354581 | 774 | - | 0.520672 |
| cfa1 | ECA0608 | Cfa-acyl carrier protein | SubName: Full=Cfa-acyl carrier protein; | chromosome | CDS | 679742 | 276 | - | 0.365942 |
| cfa3 | ECA0606 | Cfa-beta-ketoacylsynthase | SubName: Full=Cfa-beta-ketoacylsynthase; | chromosome | CDS | 678109 | 1146 | - | 0.487784 |
| cfa5 | ECA0604 | coronafacic acid synthetase, ligase component | SubName: Full=Coronafacic acid synthetase, ligase component; | chromosome | CDS | 676143 | 1440 | - | 0.516667 |
| cfa6 | ECA0603 | type I polyketide synthase | SubName: Full=Type I polyketide synthase; | chromosome | CDS | 667988 | 8142 | - | 0.556006 |
| cfa7 | ECA0602 | type I polyketide synthase | SubName: Full=Type I polyketide synthase; | chromosome | CDS | 661605 | 6387 | - | 0.550023 |
| cfa8A | ECA0601 | putative oxidoreductase | SubName: Full=Putative oxidoreductase; | chromosome | CDS | 661110 | 432 | - | 0.439815 |
| cfl | ECA0609 | coronafacate ligase | SubName: Full=Coronafacate ligase; | chromosome | CDS | 680119 | 1563 | - | 0.357646 |
| dltA | ECA3128 | putative D-alanine--poly(phosphoribitol) ligase subunit 1 | SubName: Full=Putative D-alanine--poly(Phosphoribitol) ligase subunit 1; EC=6.1.1.13; | chromosome | CDS | 3493498 | 1434 | - | 0.532078 |
| ehpB | ECA2702 | putative phenazine antibiotic biosynthesis protein | SubName: Full=Putative phenazine antibiotic biosynthesis protein; EC=3.3.2.1; | chromosome | CDS | 3038223 | 621 | - | 0.428341 |
| elbB | ECA0316 | enhancing lycopene biosynthesis protein 2 (sigma cross-reacting protein 27a) | SubName: Full=Enhancing lycopene biosynthesis protein 2 (Sigma cross-reacting protein 27a); | chromosome | CDS | 366062 | 654 | + | 0.487768 |
| entA | ECA0481 | enterobactin synthetase component A (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase) | SubName: Full=Enterobactin synthetase component A (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase); EC=1.3.1.28; | chromosome | CDS | 550604 | 786 | + | 0.599237 |
| entB | ECA0479 | enterobactin synthetase component B (isochorismatase) | SubName: Full=Enterobactin synthetase component B (Isochorismatase); EC=3.3.2.1; | chromosome | CDS | 546583 | 876 | + | 0.541096 |
| entC | ECA0477 | enterobactin synthetase component C (isochorismate synthase) | SubName: Full=Enterobactin synthetase component C (Isochorismate synthase); EC=5.4.4.2; | chromosome | CDS | 543754 | 1197 | + | 0.535505 |
| entD | ECA0474 | enterobactin synthetase component D (4'-phosphopantetheinyl transferase) | SubName: Full=Enterobactin synthetase component D (4-phosphopantetheinyl transferase); EC=2.7.8.-; | chromosome | CDS | 539365 | 717 | + | 0.53417 |
| entE | ECA0478 | enterobactin synthetase component E [includes: 2,3-dihydroxybenzoate-AMP ligase; S-dihydroxybenzoyltransferase] | SubName: Full=Enterobactin synthetase component E [includes: 2,3-dihydroxybenzoate-AMP ligase S-dihydroxybenzoyltransferase]; EC=2.3.1.-; | chromosome | CDS | 544947 | 1626 | + | 0.575031 |
| entF | ECA0480 | enterobactin synthetase component F | SubName: Full=Enterobactin synthetase component F; EC=2.7.7.-; | chromosome | CDS | 547455 | 3144 | + | 0.576972 |
| expI | ECA0105 | N-acylhomoserine lactone synthesis protein | RecName: Full=Acyl-homoserine-lactone synthase; EC=2.3.1.184; AltName: Full=Autoinducer synthesis protein; | chromosome | CDS | 125689 | 651 | + | 0.37788 |
| fabB | ECA3063 | 3-oxoacyl-[acyl-carrier-protein] synthase I | SubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; EC=2.3.1.41; | chromosome | CDS | 3420405 | 1218 | - | 0.529557 |
| fabF | ECA1799 | 3-oxoacyl-[acyl-carrier-protein] synthase II | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 2045253 | 1242 | + | 0.529791 |
| fabG | ECA1797 | 3-oxoacyl-[acyl-carrier protein] reductase | SubName: Full=3-oxoacyl-[acyl-carrier protein] reductase; EC=1.1.1.100; | chromosome | CDS | 2044045 | 735 | + | 0.487075 |
| fadD | ECA2372 | long-chain-fatty-acid--CoA ligase | SubName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; | chromosome | CDS | 2681736 | 1686 | - | 0.514828 |
| kduD | ECA2401 | 2-keto-3-deoxygluconate oxidoreductase | SubName: Full=2-keto-3-deoxygluconate oxidoreductase; EC=1.1.1.125; | chromosome | CDS | 2712101 | 762 | + | 0.507874 |
| menE | ECA1215 | O-succinylbenzoic acid--CoA ligase | SubName: Full=O-succinylbenzoic acid--CoA ligase; EC=6.2.1.26; | chromosome | CDS | 1383651 | 1431 | + | 0.575122 |
| menF | ECA1210 | menaquinone-specific isochorismate synthase | SubName: Full=Menaquinone-specific isochorismate synthase; EC=5.4.4.2; | chromosome | CDS | 1377747 | 1323 | + | 0.5548 |
| nahO | ECA1428 | acetaldehyde dehydrogenase | RecName: Full=Acetaldehyde dehydrogenase; EC=1.2.1.10; AltName: Full=Acetaldehyde dehydrogenase [acetylating]; | chromosome | CDS | 1621487 | 891 | + | 0.45679 |
| padC | ECA0069 | phenolic acid decarboxylase | SubName: Full=Phenolic acid decarboxylase; EC=4.1.1.-; | chromosome | CDS | 83450 | 510 | + | 0.482353 |
| pncA | ECA2341 | pyrazinamidase/nicotinamidase [includes: pyrazinamidase nicotinamidase] | SubName: Full=Pyrazinamidase/nicotinamidase [includes: pyrazinamidase nicotinamidase]; EC=3.5.1.-; EC=3.5.1.19; | chromosome | CDS | 2652833 | 648 | + | 0.509259 |
| prtW | ECA2785 | metalloprotease | SubName: Full=Metalloprotease; | chromosome | CDS | 3123040 | 1410 | - | 0.490071 |
| pvcA | ECA3381 | pyoverdine biosynthesis protein | SubName: Full=Pyoverdine biosynthesis protein; | chromosome | CDS | 3797644 | 981 | - | 0.46789 |
| pvcB | ECA3380 | pyoverdine biosynthesis protein | SubName: Full=Pyoverdine biosynthesis protein; | chromosome | CDS | 3796722 | 933 | - | 0.500536 |
| rrmA | ECA2390 | ribosomal RNA large subunit methyltransferase A | SubName: Full=Ribosomal RNA large subunit methyltransferase A; EC=2.1.1.51; | chromosome | CDS | 2701800 | 831 | - | 0.523466 |
| smtA | ECA2550 | putative S-adenosylmethionine-dependent methyltransferase | SubName: Full=Putative S-adenosylmethionine-dependent methyltransferase; | chromosome | CDS | 2878626 | 786 | - | 0.515267 |
| sufI | ECA0347 | putative cell division protein | RecName: Full=Cell division protein FtsP; Flags: Precursor; | chromosome | CDS | 395766 | 1416 | + | 0.558616 |
| tehB | ECA0900 | putative tellurite resistance protein | SubName: Full=Putative tellurite resistance protein; | chromosome | CDS | 1003036 | 861 | - | 0.495935 |
| vpsC | ECA0297 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 343998 | 567 | + | 0.511464 |
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