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2024-05-05 10:51:47

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Yersinia pseudotuberculosis IP 32953, IP 32953

Number of genes found: 82

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pseudotuberculosis IP 32953, IP 32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPTB0923 probable short-chain dehydrogenasechromosome CDS1115815 681 + 0.503671
NA YPTB2966 conserved hypothetical proteinchromosome CDS3499431 720 - 0.465278
NA YPTB3296 Putative siderophore biosysnthesis protein.chromosome CDS3897256 5667 - 0.492324
NA YPTB1474 putative beta-ketoacyl-[acyl-carrier-protein] reductasechromosome CDS1768786 747 + 0.429719
NA YPTB2064 putative fumarylacetoacetate hydrolase family proteinchromosome CDS2430775 657 + 0.473364
NA YPTB2137 putative short chain dehydrogenasechromosome CDS2512472 762 - 0.519685
NA YPTB1684 putative oxidoreductasechromosome CDS2037975 2067 + 0.52298
NA YPTB2032 conserved hypothetical proteinchromosome CDS2396177 972 - 0.524691
NA YPTB3261 Putative exported proteinchromosome CDS3841125 834 + 0.384892
NA YPTB1480 putative acyl carrier proteinchromosome CDS1773608 249 + 0.337349
NA YPTB1047 conserved hypothetical proteinchromosome CDS1250418 1764 + 0.520975
NA YPTB1027 probable short-chain dehydrogenasechromosome CDS1233999 777 - 0.526384
NA YPTB0781 putative dehydrogenasechromosome CDS939092 771 + 0.499352
NA YPTB1372 conserved hypothetical proteinchromosome CDS1634450 789 + 0.503169
NA YPTB3815 conserved hypothetical proteinchromosome CDS4550129 771 - 0.575875
NA YPTB1473 putative beta-ketoacyl-[acyl-carrier-protein] synthasechromosome CDS1767510 1284 + 0.430685
NA YPTB1550 putative siderophore biosynthetic enzymechromosome CDS1866652 1815 - 0.427548
NA YPTB1886 conserved hypothetical proteinchromosome CDS2228366 726 + 0.318182
NA YPTB1575 putative oxidoreductasechromosome CDS1901469 741 + 0.537112
NA YPTB1478 putative 3-oxoacyl-acyl carrier protein reductasechromosome CDS1772255 789 + 0.395437
NA YPTB1030 putative permeasechromosome CDS1236451 2430 + 0.542387
NA YPTB1985 putative dehydrogenasechromosome CDS2340757 681 - 0.405286
NA YPTB0200 conserved hypothetical proteinchromosome CDS240730 471 - 0.484076
NA YPTB3219 pore forming RTX toxin family proteinchromosome CDS3783316 9312 - 0.371241
NA YPTB1984 conserved hypothetical proteinchromosome CDS2339993 660 - 0.443939
NA YPTB2675 putative fimbrial proteinchromosome CDS3162076 1032 + 0.46124
NA YPTB1576 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase / 5-carboxymeth...chromosome CDS1902257 843 + 0.518387
NA YPTB3814 metalloproteasechromosome CDS4548727 1338 + 0.422272
NA YPTB2315 conserved hypothetical proteinchromosome CDS2732264 417 - 0.53717
NA YPTB2033 conserved hypothetical proteinchromosome CDS2397145 804 - 0.492537
NA YPTB3294 Conserved hypothetical proteinchromosome CDS3895065 1128 - 0.496454
NA YPTB1638 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase / 5-carboxymeth...chromosome CDS1989521 765 + 0.478431
NA YPTB1888 conserved hypothetical proteinchromosome CDS2229918 813 + 0.377614
NA YPTB1319 putative short chain oxidoreductasechromosome CDS1571294 816 - 0.584559
NA YPTB0249 putative carboxymethylenebutenolidasechromosome CDS294124 804 - 0.493781
NA YPTB2196 putative transcriptional regulatorchromosome CDS2585058 1803 - 0.513034
NA YPTB1607 putative phosphopantetheinyl transferasechromosome CDS1954627 741 + 0.469636
NA YPTB1470 putative short chain dehydrogenasechromosome CDS1765037 747 - 0.420348
NA YPTB3297 Possible high molecular weight siderophore biosynthesis protein.chromosome CDS3902935 11661 - 0.496098
NA YPTB3293 Putative thioesterasechromosome CDS3894299 774 - 0.488372
acpP YPTB2470 acyl carrier proteinchromosome CDS2915805 237 - 0.434599
alcA YPTB1542 putative siderophore biosynthetic enzymechromosome CDS1856239 1299 + 0.431871
alcC YPTB1544 putative siderophore biosynthetic enzymechromosome CDS1858112 1845 + 0.469919
bioC YPTB1184 biotin synthesis protein BioCchromosome CDS1411713 804 + 0.537313
elbB YPTB3498 enhancing lycopene biosynthesis protein 2chromosome CDS4163287 654 - 0.457187
fabB YPTB2626 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS3103047 1224 - 0.498366
fabF YPTB2469 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS2914469 1242 - 0.492754
fabF2 YPTB1449 3-oxoacyl-acyl carrier protein synthase IIchromosome CDS1741759 1275 - 0.523922
fabG YPTB2471 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS2916195 735 - 0.482993
fadD YPTB2057 long-chain-fatty-acid-CoA ligasechromosome CDS2423483 1689 + 0.485494
hpaB YPTB1645 4-hydroxyphenylacetate 3-monooxygenasechromosome CDS1996222 1563 + 0.486884
hpaG YPTB1637 putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase / 5-ca...chromosome CDS1988892 633 + 0.510269
hpaH YPTB1642 2-oxo-hept-3-ene-1,7-dioate hydratasechromosome CDS1993141 804 + 0.504975
hutI YPTB1966 imidazolonepropionasechromosome CDS2316318 1221 - 0.506142
idnO YPTB2571 gluconate 5-dehydrogenasechromosome CDS3042812 765 + 0.44183
irp1 YPTB1595 yersiniabactin biosynthetic proteinchromosome CDS1924950 9492 - 0.60788
irp2 YPTB1596 yersiniabactin biosynthetic proteinchromosome CDS1934529 6108 - 0.601506
iucC YPTB3265 putative siderophore biosynthesis protein IucCchromosome CDS3846315 1749 + 0.539737
iucD YPTB3266 putative siderophore biosynthesis protein IucDchromosome CDS3848060 1329 + 0.536494
kduD1 YPTB2357 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2777111 762 + 0.488189
kduD2 YPTB3083 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3636899 756 + 0.533069
menE YPTB2556 putative O-succinylbenzoic acid--CoA ligasechromosome CDS3023204 1416 - 0.576977
menF YPTB2561 menaquinone-specific isochorismate synthasechromosome CDS3029195 1374 - 0.510917
pncA YPTB2086 putative pyrazinamidase/nicotinamidasechromosome CDS2456678 648 - 0.5
rhbC YPTB3263 Possible siderophore biosynthesis protein, IucA famillychromosome CDS3843612 1773 + 0.532431
rrmA YPTB1626 rRNA (guanine-N1-)-methyltransferasechromosome CDS1974795 840 + 0.486905
smtA YPTB1427 putative methyltransferasechromosome CDS1709395 786 + 0.478372
sufI YPTB3390 putative cell division proteinchromosome CDS4025644 1425 - 0.522807
tauD YPTB3719 putative taurine dioxygenasechromosome CDS4414613 849 - 0.510012
tehB YPTB1947 putative tellurite resistance proteinchromosome CDS2288891 888 + 0.451577
yacK YPTB0722 conserved cupredoxin-like proteinchromosome CDS867390 1602 + 0.531835
yafE YPTB0908 putative methyltransferase in menaquinone/biotin biosynthesischromosome CDS1095450 522 + 0.427203
ybbA YPTB1029 putative ABC transporter ATP-binding proteinchromosome CDS1235768 687 + 0.519651
ybtE YPTB1592 yersiniabactin siderophore biosynthetic proteinchromosome CDS1921472 1578 - 0.58872
ybtT YPTB1593 yersiniabactin biosynthetic protein YbtTchromosome CDS1923053 789 - 0.584284
ybtU YPTB1594 yersiniabactin biosynthetic protein YbtUchromosome CDS1923853 1101 - 0.603088
ypsI YPTB2499 N-acylhomoserine lactone synthase YpeIchromosome CDS2949583 645 + 0.367442
yrbC YPTB3516 Conserved putative exported proteinchromosome CDS4185269 624 - 0.483974
yrbD YPTB3517 Conserved putative membrane proteinchromosome CDS4185905 558 - 0.483871
yrbE YPTB3518 ABC transporter, permease subunit, toluene tolerance proteinchromosome CDS4186467 783 - 0.505747
yrbF YPTB3519 ABC transporter, ATP-binding subunit, toluene tolerance proteinchromosome CDS4187467 819 - 0.489621
yspI YPTB3258 N-acylhomoserine lactone synthase YspIchromosome CDS3837443 651 + 0.411674