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2024-05-01 12:47:22

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529

Number of genes found: 75

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Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Bd3186 putative methyltransferasechromosome CDS3107483 759 - 0.498024
NA Bd3806 ABC-type organic solvent resistance transport system ATP-binding proteinchromosome CDS3674059 732 - 0.476776
NA Bd3584 conserved hypothetical proteinchromosome CDS3483811 1038 + 0.528902
NA Bd0447 putative dimethyladenosine transferasechromosome CDS419655 588 + 0.481293
NA Bd0392 hypothetical protein predicted by Glimmer/Criticachromosome CDS367848 660 - 0.531818
NA Bd0294 Fumarylacetoacetate hydrolase family proteinchromosome CDS278168 981 + 0.519878
NA Bd2350 Ubiquinone/menaquinone biosynthesis proteinchromosome CDS2252527 1071 - 0.528478
NA Bd3392 hypothetical proteinchromosome CDS3301545 2184 - 0.514194
NA Bd1452 putative Phenylacetic acid degradation protein PAAIchromosome CDS1374031 441 + 0.52381
NA Bd1769 ABC transporter ATP-binding proteinchromosome CDS1702384 711 + 0.472574
NA Bd0975 chromosome CDS922427 840 + 0.5
NA Bd3804 ABC-type organic solvent resistance transport system, permease proteinchromosome CDS3672567 720 - 0.484722
NA Bd0341 ABC-type transporter, ATP-binding proteinchromosome CDS323415 666 + 0.540541
NA Bd0982 dienelactone hydrolase family proteinchromosome CDS927960 789 + 0.52725
NA Bd3411 ABC transporter, permease proteinchromosome CDS3322947 789 + 0.503169
NA Bd2723 hypothetical protein predicted by Glimmer/Criticachromosome CDS2644002 1155 - 0.508225
NA Bd1768 ABC transporter permease proteinchromosome CDS1701560 825 + 0.513939
NA Bd0279 long-chain fatty-acid-CoA ligasechromosome CDS264793 1497 - 0.516366
NA Bd1701 putative methyltransferasechromosome CDS1638092 828 + 0.460145
NA Bd1520 hypothetical protein predicted by Glimmer/Criticachromosome CDS1443940 567 + 0.546737
NA Bd3413 ABC transporter substrate binding proteinchromosome CDS3324478 816 + 0.514706
NA Bd3120 ABC-type organic solvent transporter, solute-binding periplasmic protein.chromosome CDS3024468 1377 - 0.498184
NA Bd1770 ABC-type multidrug transport system substrate-binding proteinchromosome CDS1703091 954 + 0.518868
NA Bd1029 methyltransferasechromosome CDS976460 813 + 0.489545
NA Bd2815 conserved hypothetical proteinchromosome CDS2723111 702 + 0.519943
NA Bd3123 ABC-type organic solvent resistance transport system permease proteinchromosome CDS3026605 828 - 0.514493
NA Bd2105 hypothetical protein predicted by Glimmer/Criticachromosome CDS2016868 405 - 0.496296
NA Bd0037 putative oxidoreductasechromosome CDS32617 927 - 0.541532
NA Bd1724 Phytoene dehydrogenasechromosome CDS1659663 1488 + 0.5
NA Bd0327 conserved hypothetical proteinchromosome CDS310754 756 + 0.48545
NA Bd2866 putative fibronectin type III domain proteinchromosome CDS2773771 3339 - 0.569632
NA Bd2608 major anaerobically induced transmembrane proteinchromosome CDS2524266 1416 - 0.515537
NA Bd3151 AMP-ligasechromosome CDS3064736 2418 + 0.521505
NA Bd3121 ABC-type organic solvent transport system ATP-binding proteinchromosome CDS3025841 765 - 0.48366
NA Bd1573 L-lysine 6-monooxygenasechromosome CDS1501383 1278 - 0.499218
NA Bd1353 putative oxidoreductasechromosome CDS1277912 738 + 0.509485
NA Bd3803 ABC-type organic solvent resistance transport system substrate-bindin proteinchromosome CDS3671782 777 - 0.465894
NA Bd1253 conserved hypothetical proteinchromosome CDS1189756 588 - 0.530612
NA Bd3687 conserved hypothetical proteinchromosome CDS3566940 615 - 0.492683
NA Bd3709 Dipeptidylaminopeptidase/acylaminoacyl-peptidasechromosome CDS3590429 816 - 0.522059
NA Bd3807 ABC transporter, ATP-binding proteinchromosome CDS3674837 759 - 0.482213
NA Bd0559 conserved hypothetical proteinchromosome CDS517496 759 + 0.525692
NA Bd3805 ABC-type organic solvent resistance transporter, permease protein.chromosome CDS3673283 780 - 0.530769
NA Bd1393 hypothetical protein predicted by Glimmer/Criticachromosome CDS1319913 1101 + 0.505904
NA Bd0342 ABC-type transport system, permease component.chromosome CDS324080 2550 + 0.518431
NA Bd0506 putative short-chain dehydrogenase/reductasechromosome CDS475475 834 + 0.543165
NA Bd2290 putative SAM-dependent methyltransferaseschromosome CDS2184872 600 + 0.526667
NA Bd3412 ABC-type organic solvent resistance transport system ATP-binding proteinchromosome CDS3323732 747 + 0.523427
acp Bd2011 chromosome CDS1923667 237 - 0.413502
atsC Bd3556 short chain dehydrogenasechromosome CDS3458099 711 - 0.531646
bcsA Bd0331 naringenin-chalcone synthasechromosome CDS314345 1110 - 0.534234
benE Bd0311 benzoate membrane transport proteinchromosome CDS299388 1164 + 0.569588
dopA Bd0721 DOPA-dioxygenase-related proteinchromosome CDS679261 378 + 0.502645
elb Bd0586 Enhancing lycopene biosynthesis protein 2chromosome CDS545540 654 - 0.51529
fabF Bd2010 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1922389 1272 - 0.517296
fabG Bd0405 3-ketoacyl-acyl carrier protein reductasechromosome CDS381901 753 + 0.47676
fabG Bd0281 3-oxoacyl-(acyl carrier protein) reductasechromosome CDS267462 750 + 0.481333
fabG Bd1969 oxidoreductasechromosome CDS1880616 966 - 0.548654
fabG Bd2012 3-oxoacyl-(Acyl-carrier-protein) reductasechromosome CDS1924019 771 - 0.507134
fadD Bd1803 long-chain fatty-acid-CoA ligasechromosome CDS1729969 1665 - 0.52012
frpA Bd1113 Iron-regulated protein frpAchromosome CDS1046786 1905 - 0.512336
frpC Bd2209 hemolysin-type calcium binding protein / bacteriocinchromosome CDS2107364 1257 - 0.522673
hmgA Bd3185 homogentisate 1,2-dioxygenasechromosome CDS3106129 1326 + 0.521116
hutI Bd2721 imidazolonepropionasechromosome CDS2642125 1272 - 0.518082
hyuA Bd1060 hydantoin utilization proteinchromosome CDS1005449 1353 - 0.532151
hyuB Bd1059 N-methylhydantoinase Bchromosome CDS1004052 1401 - 0.54247
iucA Bd1576 Aerobactin siderophore biosynthesis protein iucAchromosome CDS1505379 1752 - 0.496575
iucC Bd1574 putative siderophore biosynthesis protein IucCchromosome CDS1502657 1749 - 0.516867
linC Bd3814 2,5-dichloro-2,5-cyclohexadiene-1,4-dioldehydrog enasechromosome CDS3680899 753 + 0.537849
menE Bd0548 menE; O-succinylbenzoate-CoA ligasechromosome CDS509592 1074 + 0.513035
menF Bd3485 menaquinone-specific isochorismate synthasechromosome CDS3395739 1089 - 0.555556
mkl Bd0915 putative ribonucleotide transport atp-binding protein.chromosome CDS867747 759 + 0.509881
phcB Bd3071 Regulatory proteinchromosome CDS2981390 1467 + 0.493524
pvcA Bd1454 pyoverdine biosynthesis protein PvcAchromosome CDS1375393 1038 + 0.515414
pvcB Bd1455 pyoverdine biosynthesis protein PvcBchromosome CDS1376427 837 + 0.492234