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2024-05-04 12:06:10

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4

Number of genes found: 35

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Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PMM0921 SAM (and some other nucleotide) binding motif:Generic methyl-transferasechromosome CDS882897 1056 + 0.289773
NA PMM1232 methyltransferasechromosome CDS1183956 1257 + 0.264121
NA PMM0414 putative short chain dehydrogenasechromosome CDS392828 705 + 0.313475
NA PMM1361 Short-chain dehydrogenase/reductase (SDR) superfamilychromosome CDS1309840 930 + 0.333333
NA PMM0636 Isochorismatase hydrolase familychromosome CDS605104 558 - 0.295699
NA PMM0478 conserved hypothetical proteinchromosome CDS452379 714 - 0.259104
NA PMM1505 SAM (and some other nucleotide) binding motifchromosome CDS1444352 936 - 0.309829
NA PMM0554 putative carboxysome peptide Achromosome CDS524862 267 + 0.40824
NA PMM0535 putative short-chain dehydrogenasechromosome CDS506510 708 + 0.331921
NA PMM1253 possible methyltransferasechromosome CDS1205599 642 + 0.242991
NA PMM1346 conserved hypothetical proteinchromosome CDS1296748 672 - 0.328869
NA PMM1241 hypothetical proteinchromosome CDS1193591 849 + 0.250883
NA PMM1324 possible transporter, membrane componentchromosome CDS1276209 756 + 0.358466
NA PMM0280 Retinal pigment epithelial membrane proteinchromosome CDS269602 1524 - 0.330709
NA PMM0662 conserved hypothetical proteinchromosome CDS631192 696 + 0.284483
NA PMM1240 methyltransferasechromosome CDS1192421 672 + 0.297619
NA PMM0555 putative carboxysome peptide Bchromosome CDS525161 222 + 0.396396
NA PMM0416 conserved hypothetical proteinchromosome CDS394729 795 - 0.313208
NA PMM0290 possible ABC transporter, ATP binding componentchromosome CDS280190 819 - 0.316239
NA PMM0694 Short-chain dehydrogenase/reductase (SDR) superfamilychromosome CDS661208 666 + 0.327327
NA PMM0289 possible ABC transporterchromosome CDS279339 846 - 0.289598
NA PMM0632 Short-chain dehydrogenase/reductase (SDR) superfamilychromosome CDS600795 708 - 0.309322
NA PMM1566 conserved hypothetical proteinchromosome CDS1494234 1506 - 0.337981
NA PMM1243 possible methyltransferasechromosome CDS1195494 846 - 0.275414
F4P13.20 PMM1168 conserved hypothetical proteinchromosome CDS1119310 645 + 0.277519
T8L23.23 PMM0339 Bacterial-type phytoene dehydrogenasechromosome CDS327659 1533 - 0.35225
acpP,acp PMM1608 acyl carrier protein (ACP)chromosome CDS1538208 243 + 0.374486
crtH PMM1115 putative carotenoid isomerasechromosome CDS1060599 1602 - 0.322097
csoS1 PMM0549 carboxysome shell protein CsoS1chromosome CDS518725 297 + 0.50505
fabF PMM1609 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1538457 1245 + 0.4
fabG PMM0453 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS432615 750 - 0.324
menE PMM0174 probable O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase)chromosome CDS167587 1218 - 0.259442
menF PMM0177 Isochorismate synthasechromosome CDS170770 1398 + 0.276109
por, pcr PMM0634 possible light-dependent protochlorophyllide oxido-reductasechromosome CDS603027 1002 + 0.243513
por, pcr PMM0542 Light dependent protochlorophyllide oxido-reductasechromosome CDS511465 1005 + 0.323383