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2024-05-04 11:07:08

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Bordetella bronchiseptica, RB50

Number of genes found: 203

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Bordetella bronchiseptica, RB50
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BB3420 putative inner membrane transport permeasechromosome CDS3663662 2532 - 0.732622
NA BB4598 hypothetical proteinchromosome CDS4896170 906 + 0.700883
NA BB3094 conserved hypothetical proteinchromosome CDS3300214 411 + 0.686131
NA BB2137 putative membrane proteinchromosome CDS2286500 630 + 0.630159
NA BB0109 Putative methyltransferasechromosome CDS107711 846 - 0.693853
NA BB0163 putative integral membrane proteinchromosome CDS172715 1137 + 0.687775
NA BB1597 Putative oxidoreductasechromosome CDS1704123 744 + 0.736559
NA BB0416 probable short-chain dehydrogenasechromosome CDS426282 726 - 0.703857
NA BB0290 conserved hypothetical proteinchromosome CDS294357 1035 - 0.725604
NA BB1149 probable short chain dehydrogenasechromosome CDS1232195 780 + 0.747436
NA BB3709 probable D-aminopeptidasechromosome CDS3930345 1149 - 0.704091
NA BB3270 probable short-chain dehydrogenasechromosome CDS3500161 717 - 0.669456
NA BB4075 putative oxidoreductasechromosome CDS4333745 801 + 0.74407
NA BB2722 Conserved hypothetical proteinchromosome CDS2884970 456 + 0.679825
NA BB0343 putative acetyl-CoA synthetasechromosome CDS354991 1551 - 0.713733
NA BB3033 putative membrane proteinchromosome CDS3237454 624 + 0.620192
NA BB0275 putative isochorismatasechromosome CDS277871 618 + 0.700647
NA BB1669 putative methyltransferasechromosome CDS1771722 486 - 0.623457
NA BB2294 probable short chain dehydrogenasechromosome CDS2423478 756 - 0.72619
NA BB1002 putative long-chain-fatty-acid-CoA ligasechromosome CDS1082135 1620 - 0.702469
NA BB4701 putative substrate-CoA ligasechromosome CDS5000651 1494 - 0.682731
NA BB1470 conserved hypothetical proteinchromosome CDS1574264 1002 - 0.643713
NA BB3662 probable short-chain dehydrogenasechromosome CDS3875022 723 + 0.710927
NA BB0165 putative exported proteinchromosome CDS174677 948 + 0.7173
NA BB1531 Putative decarboxylasechromosome CDS1635785 798 - 0.694236
NA BB1496 Putative short chain dehydrogenasechromosome CDS1601068 750 + 0.693333
NA BB3062 putative oxidoreductasechromosome CDS3268606 870 - 0.712644
NA BB0276 probable ring hydroxylating beta subunitchromosome CDS278605 516 - 0.643411
NA BB4126 putative ring-hydroxylating dioxygenase small subunitchromosome CDS4390878 522 + 0.609195
NA BB2461 probable short-chain dehydrogenasechromosome CDS2616394 741 + 0.681511
NA BB0657 putative acetyl-CoA synthetasechromosome CDS691987 1509 + 0.709742
NA BB0735 putative fumarylacetoacetate hydrolase family proteinchromosome CDS770290 768 + 0.678385
NA BB0649 probable short chain dehydrogenasechromosome CDS682816 750 + 0.730667
NA BB4150 putative short-chain dehydrogenasechromosome CDS4410503 741 - 0.74359
NA BB0518 putative hydroxylasechromosome CDS546980 459 + 0.446623
NA BB0583 putative ligasechromosome CDS610988 1686 - 0.685646
NA BB2004 probable short-chain dehydrogenasechromosome CDS2142981 759 - 0.678524
NA BB2046 hypothetical proteinchromosome CDS2194529 714 - 0.662465
NA BB0336 putative acetoacetyl-CoA reductasechromosome CDS348395 753 - 0.710491
NA BB1590 Putative dioxygenase (small subunit)chromosome CDS1697695 498 + 0.648594
NA BB3572 putative hydantoinase Bchromosome CDS3793556 1662 + 0.684116
NA BB1183 putative isochorismatasechromosome CDS1265536 627 + 0.637959
NA BB4416 probable short chain dehydrogenasechromosome CDS4701427 792 - 0.737374
NA BB3145 putative 3-oxoacyl-CoA or-ACP reductasechromosome CDS3358259 723 - 0.739972
NA BB2435 conserved hypothetical proteinchromosome CDS2588873 624 + 0.697115
NA BB0288 putative membrane proteinchromosome CDS291093 1659 + 0.654008
NA BB2483 putative isochorismatasechromosome CDS2635493 627 - 0.6874
NA BB2724 probable short-chain dehydrogenasechromosome CDS2886349 759 - 0.72332
NA BB2633 conserved hypothetical proteinchromosome CDS2795240 438 + 0.678082
NA BB2715 Conserved hypothetical proteinchromosome CDS2878501 885 - 0.698305
NA BB4384 acyl carrier proteinchromosome CDS4671776 240 - 0.6125
NA BB2766 Putative short chain dehydrogenasechromosome CDS2931336 939 - 0.643237
NA BB1959 conserved hypothetical proteinchromosome CDS2096526 648 + 0.692901
NA BB0371 putative short chain dehydrogenasechromosome CDS383760 762 + 0.687664
NA BB4132 putative enzymechromosome CDS4396129 882 + 0.623583
NA BB1782 putative isochorismatasechromosome CDS1871986 618 + 0.700647
NA BB4845 putative membrane proteinchromosome CDS5161850 786 + 0.684478
NA BB2681 probable short-chain dehydrogenasechromosome CDS2844529 780 - 0.735897
NA BB4846 mce related proteinchromosome CDS5162648 507 + 0.623274
NA BB1512 probable short chain dehydrogenasechromosome CDS1617265 780 - 0.694872
NA BB1513 probable short chain dehydrogenasechromosome CDS1618064 783 - 0.704981
NA BB0762 short chain dehydrogenasechromosome CDS795305 768 + 0.722656
NA BB2701 Putative dehydrogenasechromosome CDS2864849 780 - 0.737179
NA BB2846 Putative short-chain dehydrogenasechromosome CDS3010866 1008 + 0.714286
NA BB0164 probable ATP-binding component of ABC transporterchromosome CDS173851 840 + 0.680952
NA BB0547 putative ligasechromosome CDS575598 1557 - 0.685292
NA BB2387 putative sigma-54-dependent transcriptional regulatorchromosome CDS2543458 1869 - 0.742108
NA BB0607 AMP-binding enzymechromosome CDS635991 1521 + 0.703485
NA BB4630 short chain dehydrogenasechromosome CDS4930097 765 - 0.701961
NA BB1280 putative exported proteinchromosome CDS1371654 909 + 0.707371
NA BB3867 probable short-chain dehydrogenasechromosome CDS4103194 825 + 0.69697
NA BB2785 conserved hypothetical proteinchromosome CDS2950936 1740 + 0.702299
NA BB0373 putative short chain dehydrogenasechromosome CDS384864 783 + 0.699872
NA BB3610 phage-related hypothetical proteinchromosome CDS3836175 801 - 0.604245
NA BB1229 2-hydroxychromene-2-carboxylate isomerasechromosome CDS1323250 621 - 0.708535
NA BB1032 hypothetical proteinchromosome CDS1113464 861 + 0.759582
NA BB0287 putative membrane proteinchromosome CDS290461 630 + 0.634921
NA BB1080 putative isochorismatasechromosome CDS1162097 678 + 0.671091
NA BB1748 probable short chain dehydrogenasechromosome CDS1835070 768 + 0.72526
NA BB1200 probable short-chain dehydrogenasechromosome CDS1293953 738 + 0.714092
NA BB3555 putative fumarylacetoacetate-family hydrolasechromosome CDS3774464 861 + 0.68525
NA BB3077 putative exported proteinchromosome CDS3281113 1092 - 0.685897
NA BB4998 putative taurine catabolism dioxygenasechromosome CDS5319129 924 - 0.662338
NA BB3359 putative malonyl-CoA synthetasechromosome CDS3588185 1542 - 0.699741
NA BB0579 conserved hypothetical proteinchromosome CDS607422 804 - 0.687811
NA BB4455 ubiE/COQ5 methyltransferase family proteinchromosome CDS4747857 774 + 0.70801
NA BB3458 histone deacetylase family proteinchromosome CDS3701981 915 - 0.662295
NA BB0604 short chain dehydrogenasechromosome CDS632648 783 - 0.693487
NA BB0939 putative transport proteinchromosome CDS1016623 1218 - 0.736453
NA BB0729 putative short chain dehydrogenasechromosome CDS765183 840 + 0.733333
NA BB4185 putative oxidoreductasechromosome CDS4447984 780 - 0.679487
NA BB3032 putative exported proteinchromosome CDS3236203 1125 + 0.627556
NA BB3571 putative hydantoinase Achromosome CDS3791424 2136 + 0.684925
NA BB0202 putative aminohydrolasechromosome CDS207867 1020 - 0.677451
NA BB0705 putative membrane proteinchromosome CDS738988 1356 + 0.682153
NA BB4686 putative short chain dehydrogenasechromosome CDS4984135 786 + 0.695929
NA BB0704 putative membrane proteinchromosome CDS738467 525 + 0.649524
NA BB0751 probable short-chain dehydrogenasechromosome CDS785331 816 - 0.72549
NA BB0127 putative C-methyltransferasechromosome CDS130255 1164 + 0.565292
NA BB1113 probable short chain dehydrogenasechromosome CDS1197704 798 + 0.710526
NA BB1583 Putative decarboxylasechromosome CDS1691185 810 + 0.695062
NA BB1088 putative short chain dehydrogenasechromosome CDS1169850 786 + 0.676845
NA BB4037 putative fatty acid CoA ligasechromosome CDS4292821 1596 + 0.726817
NA BB0716 putative isochorismatasechromosome CDS752650 669 + 0.683109
NA BB4365 putative hydrolasechromosome CDS4646475 693 + 0.701299
NA BB3891 putative oxidoreductasechromosome CDS4132750 783 - 0.687101
NA BB4018 conserved hypothetical proteinchromosome CDS4268801 540 - 0.674074
NA BB0440 conserved hypothetical proteinchromosome CDS459132 765 + 0.673203
NA BB1305 putative oxidoreductasechromosome CDS1394144 705 - 0.695035
NA BB2138 putative membrane proteinchromosome CDS2287132 1668 + 0.643885
NA BB0925 putative taurine dioxygenasechromosome CDS998714 909 - 0.664466
NA BB4966 alcohol dehydrogenasechromosome CDS5284523 759 + 0.681159
NA BB4780 putative short chain dehydrogenasechromosome CDS5084870 786 - 0.716285
NA BB1176 conserved hypothetical proteinchromosome CDS1257683 435 - 0.682759
NA BB3005 probable ATP-binding ABC transporter proteinchromosome CDS3210055 714 - 0.686275
NA BB4073 beta-D-hydroxybutyrate dehydrogenasechromosome CDS4331984 798 + 0.73183
NA BB2787 probable short-chain dehydrogenasechromosome CDS2953721 714 + 0.726891
NA BB2090 conserved hypothetical proteinchromosome CDS2236678 696 + 0.662356
NA BB4848 putative exported proteinchromosome CDS5164079 624 + 0.652244
NA BB1589 Putative dioxygenasechromosome CDS1696548 1119 + 0.663092
NA BB2968 putative oxidoreductasechromosome CDS3155829 771 - 0.687419
NA BB0965 conserved hypothetical proteinchromosome CDS1042371 702 - 0.605413
NA BB1332 putative hydrolasechromosome CDS1422073 906 + 0.718543
NA BB1878 putative acetylpolyamine aminohydrolasechromosome CDS1995162 1065 - 0.69108
NA BB2717 Putative dipeptidasechromosome CDS2879886 1353 - 0.673319
NA BB3001 hypothetical proteinchromosome CDS3205955 621 - 0.650564
NA BB2489 putative oxidoreductasechromosome CDS2641703 789 + 0.736375
NA BB0706 extracellular solute-binding proteinchromosome CDS740384 1125 + 0.690667
NA BB3608 putative tail fiber assembly proteinchromosome CDS3835568 354 - 0.618644
NA BB3550 putative CoA ligasechromosome CDS3768719 1674 + 0.671446
NA BB4745 conserved hypothetical proteinchromosome CDS5048253 438 + 0.675799
NA BB4923 putative membrane proteinchromosome CDS5232451 648 + 0.70216
NA BB1053 putative dioxygenasechromosome CDS1135229 870 - 0.689655
NA BB0280 putative exported proteinchromosome CDS282506 1104 + 0.640399
NA BB0582 short chain dehydrogenasechromosome CDS610218 753 - 0.661355
NA BB4679 hypothetical proteinchromosome CDS4976666 456 + 0.679825
NA BB1518 Putative hydrolasechromosome CDS1622246 915 - 0.672131
NA BB1171 putative acid CoA ligasechromosome CDS1252287 1491 - 0.693494
NA BB3285 N-acyl-D-glutamate deacylasechromosome CDS3513682 1443 - 0.722107
NA BB4035 putative oxidoreductasechromosome CDS4290978 711 - 0.724332
NA BB0580 short chain dehydrogenasechromosome CDS608219 768 - 0.674479
NA BB1991 putative short chain dehydrogenasechromosome CDS2129663 774 - 0.686047
NA BB1344 probable hydrolasechromosome CDS1435354 720 + 0.643056
NA BB0730 hydroxylating beta subunit of a dioxygenase systemchromosome CDS766015 585 + 0.637607
NA BB0975 probable hydrolasechromosome CDS1053474 687 - 0.631732
NA BB3237 putative carboxymethylenebutenolidasechromosome CDS3463528 789 - 0.68948
NA BB4844 putative ABC transporter, ATP-binding proteinchromosome CDS5160957 897 + 0.697882
NA BB4750 putative acetoacetyl-CoA reductase; probable short chain dehyrogenasechromosome CDS5052923 768 - 0.68099
NA BB4553 conserved hypothetical proteinchromosome CDS4850953 615 - 0.669919
NA BB2317 conserved hypothetical proteinchromosome CDS2467752 837 - 0.667861
NA BB0455 putative substrate-CoA ligasechromosome CDS483720 1575 + 0.675556
NA BB4279 conserved hypothetical proteinchromosome CDS4557576 771 - 0.713359
NA BB2702 carboxymethylenebutenolidasechromosome CDS2865640 747 - 0.722892
NA BB3844 conserved hypothetical proteinchromosome CDS4074866 435 + 0.721839
NA BB4358 putative exported solute binding proteinchromosome CDS4639455 1098 - 0.653005
NA BB1125 putative long-chain-fatty-acid-CoA ligasechromosome CDS1208331 1878 - 0.719915
NA BB4249 putative fatty acid CoA ligasechromosome CDS4523257 1635 + 0.659327
NA BB0613 putative short chain dehydrogenasechromosome CDS645189 750 + 0.665333
NA BB3034 putative membrane proteinchromosome CDS3238074 1902 + 0.675605
NA BB4631 2-hydroxychromene-2-carboxylate isomerase family proteinchromosome CDS4930898 630 - 0.692064
NA BB3823 short-chain dehydrogenasechromosome CDS4051014 777 + 0.700129
NA BB1448 probable short chain dehydrogenasechromosome CDS1547495 765 + 0.726797
NA BB3147 putative dioxygenase componentchromosome CDS3359804 528 - 0.632576
NA BB4345 hypothetical proteinchromosome CDS4627377 564 + 0.673759
NA BB1587 Putative oxygenasechromosome CDS1694647 864 + 0.704861
acpP BB3755 acyl carrier proteinchromosome CDS3978741 240 - 0.533333
alcA BB3893 alcaligin biosynthesis enzymechromosome CDS4135574 1386 + 0.576479
alcC BB3895 alcaligin biosynthesis proteinchromosome CDS4137580 1857 + 0.586968
aphA BB1013 acetylpolyamine aminohydrolasechromosome CDS1095517 1047 - 0.700096
benE BB0709 benzoate membrane transport proteinchromosome CDS744369 1236 - 0.702265
bsp22 BB1617 putative secreted proteinchromosome CDS1722283 618 + 0.614887
catC2 BB0412 methylmuconolactone isomerasechromosome CDS423588 276 - 0.65942
copA BB4580 copper resitance proteinchromosome CDS4876291 1758 - 0.669511
cyaA BB0324 bifunctional hemolysin-adenylate cyclase precursorchromosome CDS331400 5223 + 0.663412
dltA BB4380 putative D-alanine-D-alanyl carrier protein ligasechromosome CDS4667892 1464 - 0.685792
fabF BB3754 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS3977322 1230 - 0.639024
fabG BB3665 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS3877800 759 + 0.706192
fabG BB2264 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS2393937 792 + 0.670455
fabG BB3756 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS3979163 753 - 0.695883
fabG BB2068 probable 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS2211387 747 + 0.678715
fabG BB4764 putative 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS5068267 747 + 0.68407
fadD BB1789 long-chain-fatty-acid--CoA ligasechromosome CDS1881817 1674 - 0.701912
fadD2 BB4175 long-chain-fatty-acid--CoA ligasechromosome CDS4437770 1677 - 0.676208
fahA BB0891 fumarylacetoacetasechromosome CDS950146 1314 - 0.701674
hmgA BB0892 homogentisate 1,2-dioxygenasechromosome CDS951568 1299 - 0.675135
hpaG BB0734 putative fumarylacetoacetate hydrolase family proteinchromosome CDS769619 675 + 0.718518
hpcG BB0739 2-oxo-hepta-3-ene-1,7-dioic acid hydratasechromosome CDS773841 816 + 0.683824
hyuA BB0318 putative hydantoin utilization protein Achromosome CDS322411 2049 + 0.679844
hyuA BB3858 hydantoin utilization protein Achromosome CDS4090038 2049 + 0.691557
hyuB BB3859 hydantoin utilization protein Bchromosome CDS4092083 2013 + 0.69846
hyuB BB0319 hydantoin utilization protein Bchromosome CDS324477 1998 + 0.675175
idnO BB4964 gluconate 5-dehydrogenasechromosome CDS5282209 780 + 0.717949
maiA BB1779 maleate cis-trans isomerasechromosome CDS1869318 753 + 0.673307
maiA BB0272 maleate cis-trans isomerasechromosome CDS275203 753 + 0.671979
oplaH BB2978 5-oxoprolinasechromosome CDS3165232 3624 - 0.697572
paaB BB3434 phenylacetic acid degradation proteinchromosome CDS3678347 285 - 0.624561
paaI BB3428 phenylacetic acid degradation proteinchromosome CDS3672980 471 - 0.687898
phbB BB3595 acetoacetyl-CoA reductasechromosome CDS3819752 738 - 0.642276
smoM BB2136 putative periplasmic solute-binding proteinchromosome CDS2285194 1095 + 0.645662
tauD BB3661 alpha-ketoglutarate-dependent taurine dioxygenasechromosome CDS3874177 849 + 0.62662
tpm BB1557 thiopurine S-methyltransferasechromosome CDS1663652 660 + 0.684848
wcbP BB2921 putative oxidoreductasechromosome CDS3098565 774 - 0.728682
wcbR BB2918 putative type I polyketide synthasechromosome CDS3088087 7584 + 0.720464