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2024-05-20 01:03:12

Gene list

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COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Vibrio cholerae O1 biovar eltor str. N16961, N16961

Number of genes found: 65

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Vibrio cholerae O1 biovar eltor str. N16961, N16961
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
VC0073 conserved hypothetical proteinRecName: Full=Ribosomal RNA small subunit methyltransferase J; EC=2.1.1.242; AltName: Full=16S rRNA m2G1516 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase; chromosome I CDS73785 879 + 0.522184
VC0091 O-methyltransferase-related proteinSubName: Full=O-methyltransferase-related protein; chromosome I CDS89116 870 - 0.503448
VC0248 acyl carrier protein, putativeSubName: Full=Acyl carrier protein, putative; chromosome I CDS254505 243 + 0.333333
VC0249 rfbL proteinSubName: Full=RfbL protein; chromosome I CDS254753 1416 + 0.376412
VC0258 rfbT proteinSubName: Full=RfbT protein; chromosome I CDS263536 684 + 0.318713
VC0488 extracellular solute-binding protein, putativeSubName: Full=Extracellular solute-binding protein, putative; chromosome I CDS519298 1080 - 0.500926
VC0771 vibriobactin-specific isochorismataseRecName: Full=Vibriobactin-specific isochorismatase; EC=3.3.2.1; AltName: Full=2,3 dihydro-2,3 dihydroxybenzoate synthase; AltName: Full=Isochorismate lyase-ArCP; chromosome I CDS826197 882 + 0.484127
VC0772 vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligaseRecName: Full=Vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase; EC=6.3.2.-; AltName: Full=Dihydroxybenzoic acid-activating enzyme; chromosome I CDS827179 1632 - 0.50674
VC0773 vibriobactin-specific isochorismate synthaseRecName: Full=Vibriobactin-specific isochorismate synthase; EC=5.4.4.2; AltName: Full=Isochorismate mutase; chromosome I CDS828821 1188 - 0.518519
VC0774 vibriobactin-specific 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenaseRecName: Full=Vibriobactin-specific 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; EC=1.3.1.28; chromosome I CDS830176 789 + 0.504436
VC0775 vibriobactin synthesis protein, putativeSubName: Full=Vibriobactin synthesis protein, putative; chromosome I CDS830976 1317 - 0.507973
VC0780 vibriobactin synthase component DSubName: Full=Vibriobactin synthase component D; chromosome I CDS836438 786 + 0.497455
VC0783 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS838377 1983 + 0.485628
VC0788 DOPA-dioxygenase-related proteinSubName: Full=DOPA-dioxygenase-related protein; chromosome I CDS844790 330 + 0.506061
VC0813 tellurite resistance protein-related proteinSubName: Full=Tellurite resistance protein-related protein; chromosome I CDS869813 579 - 0.442142
VC0979 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome I CDS1043447 828 - 0.480676
VC1059 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome I CDS1126812 744 - 0.483871
VC1114 biotin synthesis protein BioCRecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; chromosome I CDS1184009 939 + 0.505857
VC1119 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome I CDS1187655 726 + 0.511019
VC1163 conserved hypothetical proteinRecName: Full=tRNA (mo5U34)-methyltransferase; EC=2.1.1.-; chromosome I CDS1235014 972 - 0.506173
VC1164 conserved hypothetical proteinRecName: Full=tRNA (cmo5U34)-methyltransferase; EC=2.1.1.-; chromosome I CDS1236097 741 - 0.496626
VC1205 imidazolonepropionaseRecName: Full=Imidazolonepropionase; EC=3.5.2.7; AltName: Full=Imidazolone-5-propionate hydrolase; chromosome I CDS1280554 1209 - 0.53019
VC1226 thiopurine methyltransferaseRecName: Full=Thiopurine S-methyltransferase; EC=2.1.1.67; AltName: Full=Thiopurine methyltransferase; chromosome I CDS1301949 657 + 0.496195
VC1273 extracellular solute-binding protein, family 7SubName: Full=Extracellular solute-binding protein, family 7; chromosome I CDS1347537 1206 + 0.489221
VC1274 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1348844 534 + 0.458802
VC1275 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1349387 1284 + 0.500779
VC1345 oxidoreductase, putativeRecName: Full=Putative dioxygenase VC_1345; EC=1.13.-.-; chromosome I CDS1432566 1137 + 0.520668
VC1346 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1433709 1020 + 0.514706
VC1564 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS1676602 123 + 0.512195
VC1579 enterobactin synthetase component F-related proteinSubName: Full=Enterobactin synthetase component F-related protein; chromosome I CDS1688481 1671 - 0.457211
VC1589 alpha-acetolactate decarboxylaseRecName: Full=Alpha-acetolactate decarboxylase; EC=4.1.1.5; chromosome I CDS1700060 786 + 0.48855
VC1591 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome I CDS1702684 759 + 0.521739
VC1717 smtA proteinSubName: Full=SmtA protein; chromosome I CDS1855703 783 - 0.484036
VC1815 C-factor, putativeSubName: Full=C-factor, putative; chromosome I CDS1956171 708 + 0.528249
VC1817 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome I CDS1957201 1764 - 0.503968
VC1906 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2056697 1197 - 0.480368
VC1944 PvcB proteinSubName: Full=PvcB protein; chromosome I CDS2094741 864 + 0.480324
VC1949 pvcA proteinSubName: Full=PvcA protein; chromosome I CDS2098432 1827 + 0.443897
VC1970 benzoate transport proteinSubName: Full=Benzoate transport protein; chromosome I CDS2120663 1164 + 0.518041
VC1971 o-succinylbenzoic acid--CoA ligaseSubName: Full=O-succinylbenzoic acid--CoA ligase; chromosome I CDS2121855 1431 - 0.531097
VC1976 menaquinone-specific isochorismate synthaseSubName: Full=Menaquinone-specific isochorismate synthase; chromosome I CDS2127728 1308 - 0.527523
VC1985 long-chain-fatty-acid--CoA ligaseSubName: Full=Long-chain-fatty-acid--CoA ligase; chromosome I CDS2137101 1701 - 0.506173
VC2003 rRNA (guanine-N1-)-methyltransferaseSubName: Full=rRNA (Guanine-N1-)-methyltransferase; chromosome I CDS2155874 837 + 0.480287
VC2019 3-oxoacyl-(acyl-carrier-protein) synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II; AltName: Full=Beta-ketoacyl-ACP synthase II; Short=KAS II; chromosome I CDS2172775 1245 - 0.501205
VC2020 acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome I CDS2174108 333 - 0.426426
VC2021 3-oxoacyl-(acyl-carrier-protein) reductaseRecName: Full=3-oxoacyl-[acyl-carrier-protein] reductase FabG; EC=1.1.1.100; AltName: Full=3-ketoacyl-acyl carrier protein reductase; AltName: Full=Beta-Ketoacyl-acyl carrier protein reductase; AltName: Full=Beta-ketoacyl-ACP reductase; chromosome I CDS2174580 747 - 0.504685
VC2042 histone deacetylase/AcuC/AphA family proteinSubName: Full=Histone deacetylase/AcuC/AphA family protein; chromosome I CDS2199637 921 - 0.4962
VC2047 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome I CDS2204761 681 + 0.46696
VC2235 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2389365 738 - 0.45393
VC2240 decarboxylaseRecName: Full=Probable phenolic acid decarboxylase; Short=PAD; EC=4.1.1.-; chromosome I CDS2393996 525 - 0.447619
VC2517 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2704229 642 - 0.468847
VC2518 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2704871 492 - 0.465447
VC2519 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome I CDS2705365 777 - 0.539254
VC2520 ABC transporter, ATP-binding proteinSubName: Full=ABC transporter, ATP-binding protein; chromosome I CDS2706146 804 - 0.502488
VCA0178 frnE proteinSubName: Full=FrnE protein; chromosome II CDS195304 654 - 0.51529
VCA0301 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome II CDS316096 753 + 0.426295
VCA0580 conserved hypothetical proteinRecName: Full=Putative esterase VC_A0580; EC=3.1.2.-; chromosome II CDS519376 588 - 0.460884
VCA0610 sigma cross-reacting protein 27ASubName: Full=Sigma cross-reacting protein 27A; chromosome II CDS546518 651 + 0.511521
VCA0691 acetoacetyl-CoA reductaseSubName: Full=Acetoacetyl-CoA reductase; chromosome II CDS629322 741 - 0.466937
VCA0712 pyrazinamidase/nicotinamidaseSubName: Full=Pyrazinamidase/nicotinamidase; chromosome II CDS657433 621 - 0.495974
VCA0781 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS723771 2448 - 0.517974
VCA0782 ABC transporter, ATP-binding proteinSubName: Full=ABC transporter, ATP-binding protein; chromosome II CDS726215 678 - 0.5059
VCA0832 methyltransferase, putativeSubName: Full=Methyltransferase, putative; chromosome II CDS777308 633 - 0.486572
VCA1004 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS957203 615 - 0.486179
VCA1108 oxidoreductase, short-chain dehydrogenase/reductase familySubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome II CDS1062830 798 - 0.516291