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2024-05-18 20:29:47

Gene list

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COG category: Inorganic ion transport and metabolism
Genomic element: chromosome

Number of genes found: 208

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shewanella oneidensis MR-1, MR-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
SO0050 rhodanese domain proteinchromosome CDS57409 435 + 0.404598
SO0057 potassium uptake protein, Trk familychromosome CDS64299 1362 - 0.494861
SO0058 potassium uptake protein, putativechromosome CDS65662 699 - 0.482117
SO0069 transport protein, putativechromosome CDS80667 1140 - 0.499123
SO0087 hypothetical proteinchromosome CDS97161 561 + 0.486631
SO0120 hypothetical proteinchromosome CDS129650 579 - 0.455959
SO0325 dsrE-related proteinchromosome CDS330614 360 - 0.411111
SO0354 sodium/calcium exchangerchromosome CDS361225 951 - 0.451104
SO0365 conserved hypothetical proteinchromosome CDS375687 1425 + 0.516491
SO0450 major facilitator family proteinchromosome CDS477300 1164 - 0.49055
SO0451 hypothetical proteinchromosome CDS478775 153 + 0.45098
SO0480 conserved domain proteinchromosome CDS504866 441 + 0.473923
SO0520 heavy metal efflux pump, CzcA familychromosome CDS541742 3228 + 0.526332
SO0525 drug resistance transporter, EmrB/QacA family proteinchromosome CDS548245 1620 + 0.499383
SO0534 arsenical pump membrane protein, putativechromosome CDS554812 1020 + 0.454902
SO0539 transporter, putativechromosome CDS558328 1263 + 0.497229
SO0550 hypothetical proteinchromosome CDS572159 420 - 0.461905
SO0565 adhesion protein, putativechromosome CDS586522 882 + 0.482993
SO0566 ABC 3 transport family proteinchromosome CDS587408 780 + 0.476923
SO0654 hypothetical proteinchromosome CDS677934 558 + 0.424731
SO0695 glutathione-regulated potassium-efflux system protein KefC, putativechromosome CDS712378 1644 - 0.469586
SO0719 TonB-dependent receptor, putativechromosome CDS734402 2244 - 0.487522
SO0726 ABC transporter, ATP-binding proteinchromosome CDS741023 1413 + 0.4954
SO0737 TonB-dependent receptor, putativechromosome CDS751569 2079 + 0.492063
SO0740 melanin biosynthesis protein TyrA, putativechromosome CDS756464 936 - 0.465812
SO0743 iron(III) ABC transporter, permease proteinchromosome CDS760518 1635 - 0.498471
SO0744 iron(III) ABC transporter, periplasmic iron(III)-binding proteinchromosome CDS762286 1008 - 0.475198
SO0798 conserved hypothetical proteinchromosome CDS810487 2163 - 0.492372
SO0806 alkaline phosphatase, putativechromosome CDS817728 1767 + 0.502547
SO0815 TonB-dependent receptor C-terminal domain proteinchromosome CDS827155 1962 + 0.490316
SO0830 alkaline phosphatasechromosome CDS848099 1365 - 0.489377
SO0986 chromate transporter, putativechromosome CDS1013799 1173 + 0.473146
SO0998 hypothetical proteinchromosome CDS1029674 180 + 0.277778
SO1033 iron-compound ABC transporter, ATP-binding protein, putativechromosome CDS1072108 858 + 0.487179
SO1034 iron-compound ABC transporter, permease proteinchromosome CDS1072962 1143 + 0.494313
SO1051 periplasmic glucan biosynthesis protein, putativechromosome CDS1087671 1794 + 0.482163
SO1069 conserved hypothetical proteinchromosome CDS1109339 228 + 0.372807
SO1086 hypothetical proteinchromosome CDS1125513 600 - 0.451667
SO1102 TonB-dependent receptor C-terminal region domain lipoproteinchromosome CDS1143783 2052 + 0.464425
SO1156 TonB-dependent receptorchromosome CDS1199204 2148 + 0.477188
SO1158 Dps family proteinchromosome CDS1202620 468 - 0.448718
SO1190 conserved hypothetical proteinchromosome CDS1233332 819 + 0.460317
SO1247 hypothetical proteinchromosome CDS1298063 636 + 0.451258
SO1261 mercaptopyruvate sulfurtransferasechromosome CDS1310077 858 + 0.465035
SO1302 chloride channelchromosome CDS1354559 1725 - 0.485217
SO1309 conserved hypothetical proteinchromosome CDS1359989 3024 + 0.479828
SO1354 hemolysin protein, putativechromosome CDS1409349 1272 - 0.460692
SO1365 hypothetical proteinchromosome CDS1421173 336 + 0.410714
SO1366 sodium/hydrogen exchanger family proteinchromosome CDS1421554 1305 + 0.477395
SO1376 conserved hypothetical proteinchromosome CDS1432963 636 + 0.471698
SO1407 mercuric transport periplasmic protein MerP, putativechromosome CDS1462465 309 + 0.469256
SO1481 glutathione-regulated potassium-efflux system proteinchromosome CDS1544160 1770 + 0.497175
SO1482 TonB-dependent receptor, putativechromosome CDS1545994 2448 - 0.459559
SO1560 phosphate-binding proteinchromosome CDS1636778 972 + 0.434156
SO1565 magnesium transporter, putativechromosome CDS1642222 1371 + 0.489424
SO1580 TonB-dependent heme receptorchromosome CDS1656634 2214 + 0.451671
SO1647 glutathione-regulated potassium-efflux system protein KefB, putativechromosome CDS1732372 1947 + 0.492553
SO1689 cation transport ATPase, E1-E2 familychromosome CDS1774519 2262 + 0.514147
SO1724 phosphate ABC transporter, permease protein, putativechromosome CDS1810696 1659 + 0.505124
SO1747 membrane protein, putativechromosome CDS1827621 978 + 0.449898
SO1822 TonB-dependent receptor, putativechromosome CDS1914178 2811 + 0.42227
SO1917 multidrug resistance protein, putativechromosome CDS2017503 1242 + 0.477456
SO2004 TonB-dependent receptor C-terminal region domain proteinchromosome CDS2103703 480 + 0.39375
SO2045 cation efflux family proteinchromosome CDS2143235 1185 + 0.463291
SO2159 TonB domain proteinchromosome CDS2273133 300 - 0.413333
SO2162 tonB dependent receptor-related proteinchromosome CDS2274632 2511 - 0.448029
SO2280 bicyclomycin resistance proteinchromosome CDS2392027 1224 - 0.459967
SO2286 sulfate permease family proteinchromosome CDS2400453 1758 + 0.467008
SO2359 cation transport ATPase, E1-E2 familychromosome CDS2465253 2400 - 0.471667
SO2373 drug resistance transporter, Bcr/CflA family proteinchromosome CDS2477741 1272 - 0.420597
SO2376 dsrE-related proteinchromosome CDS2481005 393 + 0.475827
SO2377 conserved hypothetical proteinchromosome CDS2481412 357 + 0.392157
SO2378 conserved hypothetical proteinchromosome CDS2481768 282 + 0.43617
SO2379 conserved hypothetical proteinchromosome CDS2482043 339 + 0.463127
SO2427 TonB-dependent receptor, putativechromosome CDS2534781 2562 - 0.440281
SO2458 transporter, putativechromosome CDS2574251 1590 + 0.471698
SO2469 conserved hypothetical proteinchromosome CDS2589746 2676 + 0.435725
SO2470 conserved hypothetical proteinchromosome CDS2592717 345 + 0.417391
SO2474 carbonic anhydrase family proteinchromosome CDS2596048 606 + 0.463696
SO2523 conserved hypothetical proteinchromosome CDS2647904 2832 + 0.488701
SO2537 sodium/hydrogen exchanger family proteinchromosome CDS2665973 2010 - 0.471642
SO2715 TonB-dependent receptorchromosome CDS2832601 2202 - 0.463669
SO2718 conserved hypothetical proteinchromosome CDS2835906 1155 - 0.403463
SO2805 conserved hypothetical proteinchromosome CDS2928566 1173 + 0.456095
SO2871 arsenate reductase, putativechromosome CDS2993202 369 + 0.452575
SO2906 conserved hypothetical proteinchromosome CDS3033131 999 + 0.458458
SO2907 TonB-dependent receptor domain proteinchromosome CDS3034793 2655 + 0.433145
SO2911 formate transporter, putativechromosome CDS3040153 975 - 0.467692
SO2946 hypothetical proteinchromosome CDS3084700 789 - 0.451204
SO3009 hypothetical proteinchromosome CDS3124113 279 + 0.336918
SO3033 ferric alcaligin siderophore receptorchromosome CDS3144235 2103 + 0.509748
SO3078 major facilitator family protein, putativechromosome CDS3197219 1170 - 0.505128
SO3104 conserved hypothetical proteinchromosome CDS3232325 213 + 0.431925
SO3163 lipoproteinchromosome CDS3300032 453 + 0.439294
SO3485 drug resistance transporter, Bcr/CflA family proteinchromosome CDS3634276 1149 - 0.471715
SO3514 conserved hypothetical proteinchromosome CDS3667095 2625 - 0.413714
SO3553 sulfate permease family proteinchromosome CDS3710411 1767 + 0.487267
SO3667 conserved hypothetical proteinchromosome CDS3820350 558 - 0.473118
SO3668 conserved hypothetical proteinchromosome CDS3820941 561 - 0.465241
SO3709 ABC transporter, periplasmic substrate-binding protein, putativechromosome CDS3857261 765 - 0.465359
SO3724 hypothetical proteinchromosome CDS3868662 189 - 0.433862
SO3747 sodium/hydrogen exchanger family/TrkA domain proteinchromosome CDS3892711 1725 - 0.478261
SO3768 ion transporterchromosome CDS3916681 825 + 0.472727
SO3770 conserved hypothetical protein TIGR00153chromosome CDS3919286 681 + 0.447871
SO3771 phosphate transporter, putativechromosome CDS3920007 1275 + 0.450196
SO3814 ampG protein, putativechromosome CDS3965543 1386 + 0.474026
SO3850 hypothetical proteinchromosome CDS3998316 159 + 0.515723
SO3851 hypothetical proteinchromosome CDS3998475 147 + 0.421769
SO3914 TonB-dependent receptor, putativechromosome CDS4058893 2193 - 0.464204
SO3933 membrane protein, putativechromosome CDS4077285 1425 + 0.507368
SO3967 molybdenum ABC transporter, periplasmic molybdenum-binding protein, putativechromosome CDS4107097 774 - 0.48708
SO3980 cytochrome c552 nitrite reductasechromosome CDS4116204 1404 - 0.448718
SO3984 magnesium transporter, putativechromosome CDS4120909 966 + 0.465839
SO4021 transporter, putativechromosome CDS4170459 1191 - 0.468514
SO4029 transporter, putativechromosome CDS4183245 1368 - 0.470029
SO4050 conserved hypothetical proteinchromosome CDS4202933 1029 - 0.499514
SO4077 TonB-dependent receptor, putativechromosome CDS4229648 2127 + 0.492713
SO4150 transporter, putativechromosome CDS4324796 1275 + 0.511373
SO4279 membrane protein, putativechromosome CDS4457392 978 + 0.452965
SO4281 potassium uptake protein KtrA, putativechromosome CDS4460581 645 + 0.368992
SO4285 hypothetical proteinchromosome CDS4465546 150 + 0.32
SO4447 molybdenum ABC transporter, permease proteinchromosome CDS4637289 681 - 0.509545
SO4448 molybdenum ABC transporter, periplasmic molybdenum-binding proteinchromosome CDS4637978 792 - 0.497475
SO4475 cation efflux family proteinchromosome CDS4663350 891 - 0.483726
SO4476 spheroplast protein y precursor, putativechromosome CDS4664291 492 - 0.473577
SO4502 conserved domain proteinchromosome CDS4694289 906 - 0.476821
SO4555 drug resistance transporter, Bcr/CflA family proteinchromosome CDS4751075 1209 - 0.488007
SO4598 heavy metal efflux pump, CzcA familychromosome CDS4789789 3138 + 0.508923
SO4712 ABC transporter, ATP-binding protein, putativechromosome CDS4914674 1395 - 0.4681
SO4721 ABC transporter, ATP-binding proteinchromosome CDS4925723 708 + 0.483051
SO4743 TonB-dependent receptor, putativechromosome CDS4954248 2073 - 0.434153
amt ammonium transporterchromosome CDS775008 1227 - 0.479218
apaG apaG proteinchromosome CDS3799509 381 + 0.469816
bfd bacterioferritin-associated ferredoxinchromosome CDS608899 192 - 0.442708
bfr1 bacterioferritin subunit 1chromosome CDS1154202 468 + 0.444444
bfr2 bacterioferritin subunit 2chromosome CDS1153719 474 + 0.447257
ccoS cytochrome oxidase maturation protein, cbb3-typechromosome CDS2465029 204 - 0.460784
ccpA cytochrome c551 peroxidasechromosome CDS2289445 1002 - 0.486028
chaA calcium/proton antiporterchromosome CDS1032741 1098 - 0.467213
corA magnesium and cobalt transport protein CorAchromosome CDS2044482 948 + 0.444093
corC magnesium and cobalt efflux protein CorCchromosome CDS1221180 876 - 0.462329
cutA periplasmic divalent cation tolerance protein CutAchromosome CDS716003 324 - 0.472222
cyaY cyay proteinchromosome CDS4487644 324 + 0.469136
cysA-1 sulfate ABC transporter, ATP-binding proteinchromosome CDS3763964 1131 + 0.500442
cysA-2 sulfate ABC transporter, ATP-binding proteinchromosome CDS4850802 1065 + 0.456338
cysC adenylylsulfate kinasechromosome CDS3868048 618 - 0.485437
cysI sulfite reductase (NADPH) hemoprotein beta-component (cysI)chromosome CDS3880961 1698 - 0.489399
cysJ sulfite reductase (NADPH) flavoprotein alpha-componentchromosome CDS3882734 1824 - 0.495614
cysN sulfate adenylyltransferase, subunit 1chromosome CDS3869200 1428 - 0.481092
cysP sulfate ABC transporter, periplasmic sulfate-binding proteinchromosome CDS3761060 1008 + 0.460317
cysQ-1 cysQ proteinchromosome CDS200915 813 + 0.493235
cysQ-2 cysQ proteinchromosome CDS1742741 762 + 0.488189
cysW-1 sulfate ABC transporter, permease proteinchromosome CDS3763098 870 + 0.508046
cysW-2 sulfate ABC transporter, permease proteinchromosome CDS4849923 852 + 0.471831
emrD multidrug resistance protein Dchromosome CDS2492556 1245 + 0.481928
feoA ferrous iron transport protein Achromosome CDS1869642 240 + 0.466667
feoB ferrous iron transport protein Bchromosome CDS1869874 2295 + 0.477996
ftn ferritinchromosome CDS145712 537 + 0.435754
fur ferric uptake regulation proteinchromosome CDS2041962 432 - 0.402778
glpE glpE proteinchromosome CDS4870549 306 - 0.434641
gppA guanosine-5'-triphosphate,3'-diphosphatepyrophos phatasechromosome CDS425050 921 + 0.462541
hmuT hemin ABC transporter, periplasmic hemin-binding proteinchromosome CDS3826056 954 + 0.487421
hmuU hemin ABC transporter, permease proteinchromosome CDS3827012 1017 + 0.505408
hmuV hemin ABC transporter, ATP-binding proteinchromosome CDS3828103 756 + 0.502645
hugA heme transport proteinchromosome CDS3821526 2094 - 0.473257
irgA iron-regulated outer membrane virulence proteinchromosome CDS4717121 1998 - 0.501001
katB catalasechromosome CDS1109981 1461 + 0.471595
katG-1 catalase/peroxidase HPIchromosome CDS738494 2226 + 0.50584
katG-2 catalase/peroxidase HPIchromosome CDS4597190 2187 - 0.504801
ktrB potassium uptake protein KtrBchromosome CDS4461229 1365 + 0.361172
mdoG-1 periplasmic glucans biosynthesis protein MdoGchromosome CDS2204288 1497 + 0.470942
mdoG-2 periplasmic glucans biosynthesis protein MdoGchromosome CDS2847162 1587 + 0.434783
mgtE-1 magnesium transporterchromosome CDS1188716 1374 - 0.46361
mgtE-2 magnesium transporterchromosome CDS4105650 1365 + 0.501832
modA molybdenum ABC transporter, periplasmic molybdenum-binding proteinchromosome CDS4010051 765 + 0.477124
modB molybdenum ABC transporter, permease proteinchromosome CDS4010815 738 + 0.51626
modC molybdenum ABC transporter, ATP-binding proteinchromosome CDS4011546 1086 + 0.485267
napD napD proteinchromosome CDS871506 285 - 0.480702
natA ATP-binding transport protein NatAchromosome CDS81904 735 - 0.541497
nhaA Na+/H+ antiporterchromosome CDS1393979 1170 + 0.460684
nhaB Na+/H+ antiporterchromosome CDS3008481 1602 + 0.429463
nhaD Na+/H+ antiporterchromosome CDS966474 1431 + 0.475891
nosA TonB-dependent receptorchromosome CDS655861 2007 + 0.4858
nosD copper ABC transporter, periplasmic copper-binding proteinchromosome CDS509313 1275 + 0.494118
nrfD formate-dependent nitrite reductase, nrfD proteinchromosome CDS507756 936 + 0.483974
nrfD-2 formate-dependent nitrite reductase, nrfD proteinchromosome CDS4763717 942 - 0.469214
nuoL NADH dehydrogenase I, L subunitchromosome CDS1048384 1848 - 0.624459
phnA phnA proteinchromosome CDS1658982 564 + 0.492908
phoU phosphate transport system regulatory protein PhoUchromosome CDS1813338 711 + 0.465541
pit low-affinity inorganic phosphate transporterchromosome CDS1089653 1470 + 0.479592
ppx exopolyphosphatasechromosome CDS2294916 1557 - 0.470777
pspE-1 phage shock protein Echromosome CDS3232563 399 + 0.478697
pspE-2 phage shock protein Echromosome CDS4589665 327 + 0.46789
psrC polysulfide reductase, subunit Cchromosome CDS4213932 945 - 0.500529
pstA phosphate ABC transporter, permease proteinchromosome CDS4469229 837 - 0.41816
pstB-1 phosphate ABC transporter, ATP-binding proteinchromosome CDS1812412 795 + 0.486792
pstB-2 phosphate ABC transporter, ATP-binding proteinchromosome CDS4468437 750 - 0.408
pstC phosphate ABC transporter, permease proteinchromosome CDS4470095 873 - 0.427262
pstS phosphate ABC transporter, periplasmic phosphate-binding proteinchromosome CDS4471049 810 - 0.411111
sapB peptide ABC transporter, permease proteinchromosome CDS1893833 1032 - 0.438953
sbp sulfate ABC transporter, periplasmic sulfate-binding proteinchromosome CDS4848018 1014 + 0.422091
sodB superoxide dismutase, Fechromosome CDS3001471 585 + 0.45812
sugE sugE proteinchromosome CDS2001494 315 + 0.466667
thiI thiamine biosynthesis protein ThiIchromosome CDS1606408 1455 + 0.461168
trkA potassium uptake protein TrkAchromosome CDS33706 1410 - 0.495035
trkH-1 potassium uptake protein TrkHchromosome CDS29096 1461 + 0.460643
trkH-2 potassium uptake protein TrkHchromosome CDS32252 1443 - 0.474705
viuA ferric vibriobactin receptorchromosome CDS4710223 2058 - 0.46793