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2024-05-18 20:53:00

Gene list

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COG category: Inorganic ion transport and metabolism
Genomic element: chromosome 1

Number of genes found: 168

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Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA1537 Hypothetical methylamine metabolism proteinchromosome 1 CDS1742327 1194 + 0.366834
NA PBPRA3098 hypothetical cell shape-determining proteinchromosome 1 CDS3538789 420 - 0.416667
NA PBPRA3333 hypothetical proteinchromosome 1 CDS3783453 363 - 0.292011
NA PBPRA0810 Putative thiamin biosynthesis protein, ThiIchromosome 1 CDS897147 1449 + 0.403727
NA PBPRA1847 Hypothetical proteinchromosome 1 CDS2129651 918 + 0.421569
NA PBPRA1473 hypothetical proteinchromosome 1 CDS1672459 1476 - 0.448509
NA PBPRA2068 hypothetical proteinchromosome 1 CDS2381528 897 - 0.358974
NA PBPRA2182 Conserved hypothetical proteinchromosome 1 CDS2510778 2301 + 0.421556
ABC-NBD PBPRA2240 putative ABC transporter, ATP-binding proteinchromosome 1 CDS2577953 1695 + 0.40531
AGR_C_34 PBPRA3184 putative ABC transporter, periplasmic iron-compound-binding proteinchromosome 1 CDS3612210 1059 - 0.419263
AGR_L_28 PBPRA2253 hypothetical ABC transporter permeasechromosome 1 CDS2594855 861 + 0.406504
AMPG PBPRA0815 putative ampG proteinchromosome 1 CDS903125 1389 - 0.431965
AMT-2 PBPRA3185 putative ammonium transporterchromosome 1 CDS3613428 1230 - 0.445528
APE2447 PBPRA1652 Conserved hypothetical proteinchromosome 1 CDS1880243 444 + 0.371622
ATU1040 PBPRA2321 putative MFS transporterchromosome 1 CDS2672450 1239 + 0.447942
BA3197 PBPRA1540 putative heavy metal membrane efflux proteinchromosome 1 CDS1747057 1068 + 0.411985
BCP PBPRA1759 conserved hypothetical proteinchromosome 1 CDS2021519 459 + 0.405229
BH0414 PBPRA2323 putative sulfate permeasechromosome 1 CDS2675371 282 + 0.429078
BPP3592 PBPRA0100 putative peptide ABC transporterchromosome 1 CDS101704 978 + 0.456033
BPP4108 PBPRA0982 hypothetical copper resistance protein B precursorchromosome 1 CDS1084646 930 - 0.446237
C1634 PBPRA2609 putative Na+/H+-exchanging proteinchromosome 1 CDS3023200 1593 + 0.409918
C1664 PBPRA2914 hypothetical sulfate permease family proteinchromosome 1 CDS3344121 1743 - 0.436604
C2271 PBPRA1056 hypothetical zinc ABC transporter, periplasmiczinc-binding proteinchromosome 1 CDS1173413 603 + 0.402985
C3062 PBPRA3400 putative transport permease proteinchromosome 1 CDS3849418 1227 - 0.458843
C5066 PBPRA1258 putative Formate-dependent nitrite reductase,periplasmic cytochrome c552 subunitchromosome 1 CDS1424726 1464 - 0.453552
CBU0014 PBPRA0443 putative phosphate/sulphate permeasechromosome 1 CDS457627 1269 - 0.441292
COPA PBPRA2824 hypothetical cation-transporting ATPasechromosome 1 CDS3272255 2898 + 0.441684
CPE1621 PBPRA1297 hypothetical cation efflux system componentchromosome 1 CDS1472257 702 + 0.383191
CUTC PBPRA0734 hypothetical copper homeostasis proteinchromosome 1 CDS813549 738 - 0.436314
CYSN PBPRA3310 putative sulfate adenylate transferase, subunit 1chromosome 1 CDS3757943 1431 - 0.421384
CYSQ-2 PBPRA3307 putative sulfite synthesis pathway proteinchromosome 1 CDS3754796 744 - 0.435484
EBIG1812 PBPRA3376 putative carbonic anhydrasechromosome 1 CDS3817100 726 + 0.4573
ECS0155 PBPRA1565 putative iron(III) ABC transporter, ATP-binding proteinchromosome 1 CDS1778250 786 - 0.440204
FUR PBPRA1035 putative Fur, Fe2+/Zn2+ uptake regulation proteinschromosome 1 CDS1152168 447 - 0.38255
GLPE PBPRA0156 putative thiosulfate sulfurtransferase glpEchromosome 1 CDS158146 333 + 0.411411
HD0620 PBPRA2100 putative HugZ proteinchromosome 1 CDS2417997 558 - 0.401434
HD1145 PBPRA2881 putative hemolysinchromosome 1 CDS3311175 873 + 0.444444
HMUT PBPRA2106 hypothetical hemin ABC transporter, periplasmichemin-binding protein HutBchromosome 1 CDS2423054 858 + 0.416084
HMUU PBPRA2107 putative hemin ABC transporter, permease proteinchromosome 1 CDS2423930 1053 + 0.433998
HUPA PBPRA1535 hypothetical heme receptorchromosome 1 CDS1738246 2148 + 0.424115
NAPA PBPRA2521 Hypothetical nitrate transporterchromosome 1 CDS2919233 1476 - 0.419377
NE1633 PBPRA3260 putative magnesium transporterchromosome 1 CDS3691993 1359 + 0.463576
NHAA PBPRA0583 putative Na+/H+ antiporterchromosome 1 CDS637377 1158 + 0.424007
PA3531 PBPRA0318 putative bacterioferritinchromosome 1 CDS331836 477 + 0.343816
PA3887 PBPRA3295 putative Na+/H+ antiporterchromosome 1 CDS3739632 1110 + 0.390991
PA5208 PBPRA0444 putative phosphate transport regulatorchromosome 1 CDS458928 681 - 0.443466
PHUV PBPRA2108 Hypothetical hemin ABC transporter, ATP-binding protein HutDchromosome 1 CDS2424979 834 + 0.423261
PLU0218 PBPRA0731 Putative phosphate transport system regulatory protein PhoUchromosome 1 CDS810567 711 + 0.410689
PLU0905 PBPRA0536 conserved hypothetical proteinchromosome 1 CDS570797 825 - 0.441212
PLU2316 PBPRA1670 hypothetical outer membrane receptorchromosome 1 CDS1917511 1968 - 0.438516
PLU2317 PBPRA1669 hypothetical proteinchromosome 1 CDS1916238 1269 - 0.427896
PLU2492 PBPRA1132 putative oligopeptide ABC transporter, permeaseproteinchromosome 1 CDS1255567 921 + 0.411509
PLU2764 PBPRA0724 putative exopolyphosphatasechromosome 1 CDS801105 1188 - 0.430135
PM0667 PBPRA0126 putative ferritinchromosome 1 CDS128586 528 + 0.407197
PM1167 PBPRA1999 putative transporter, NadC familychromosome 1 CDS2301349 1371 + 0.42159
PP1645 PBPRA2903 Putative arsenate reductase ArsCchromosome 1 CDS3335018 351 + 0.430199
PP4304 PBPRA1101 Putative potassium channelchromosome 1 CDS1219923 819 - 0.409035
PP5327 PBPRA0729 putative phosphate ABC transporter, permease proteinchromosome 1 CDS808049 1662 + 0.420578
PRO1576 PBPRA2207 putative transporterchromosome 1 CDS2539619 1290 - 0.427907
PSPTO199 PBPRA1836 putative cation transport ATPase, E1-E2 familychromosome 1 CDS2117406 2310 + 0.433766
PSPTO326 PBPRA2522 putative nitrite reductase NADPHchromosome 1 CDS2920995 333 - 0.402402
PSPTO359 PBPRA1185 putative sulfate permease family proteinchromosome 1 CDS1332310 1560 - 0.427564
PSTS PBPRA1394 putative phosphate ABC transporter, periplasmicphosphate-binding proteinchromosome 1 CDS1567490 825 - 0.413333
PYRAB093 PBPRA0524 putative peptide ABC transporter, permease proteinchromosome 1 CDS553220 987 - 0.453901
PYRAB153 PBPRA0523 putative peptide ABC transporter, permeaseproteinchromosome 1 CDS552189 1029 - 0.466472
R01996 PBPRA1007 putative cation efflux family proteinchromosome 1 CDS1117368 957 + 0.425287
R02223 PBPRA1566 putative iron(III) compound receptorchromosome 1 CDS1779120 2100 - 0.450476
R02255 PBPRA2252 hypothetical ABC transporter, permease proteinchromosome 1 CDS2593888 966 + 0.379917
R02595 PBPRA0101 putative peptide ABC transporter, permease proteinchromosome 1 CDS102685 942 + 0.443737
RB11050 PBPRA0582 putative sodium-dependent phosphate pump NptAchromosome 1 CDS635752 1311 - 0.424867
RB9536 PBPRA1561 conserved hypothetical proteinchromosome 1 CDS1773482 612 + 0.393791
RB9551 PBPRA1542 putative arsenical pump-driving ATPase(Arsenite-translocating ATPase)chromosome 1 CDS1748526 1773 + 0.49013
RS03165 PBPRA1427 putative nitrite reductase (NAD(P)H) smallsubunitchromosome 1 CDS1600019 327 - 0.461774
RSC2632 PBPRA1891 putative ABC-type cobalt transport system, ATPase componentchromosome 1 CDS2178363 714 + 0.413165
S0490 PBPRA1003 putative cation efflux system transmembrane proteinchromosome 1 CDS1110086 3126 - 0.461932
S2664 PBPRA0845 hypothetical arsenate reductasechromosome 1 CDS935577 363 - 0.396694
S2694 PBPRA0726 putative polyphosphate kinasechromosome 1 CDS802599 2103 - 0.409891
S2695 PBPRA0725 hypotetical proteinchromosome 1 CDS802445 168 - 0.470238
S2972 PBPRA3320 putative sulfite reductase (NADPH) hemoprotein beta-componentchromosome 1 CDS3768447 1692 - 0.449173
S3600 PBPRA1261 Putative nitrate reductase, formate dependent (NrfD)chromosome 1 CDS1428114 960 + 0.405208
S4118 PBPRA0225 conserved hypothetical proteinchromosome 1 CDS233245 441 + 0.376417
SCO4896 PBPRA1368 putative multidrug resistance proteinchromosome 1 CDS1537425 1347 + 0.439495
SF0190 PBPRA2940 putative ABC-type metal ion transportsystem, ATPase componentchromosome 1 CDS3370485 1116 + 0.400538
SF2773 PBPRA3308 putative adenylylsulfate kinasechromosome 1 CDS3755552 627 - 0.417863
SF2780 PBPRA3321 putative sulfite reductase (NADPH) flavoprotein alpha-componentchromosome 1 CDS3770138 1818 - 0.437844
SF3361 PBPRA0312 hypothetical proteinchromosome 1 CDS326446 294 + 0.357143
SF3362 PBPRA0311 conserved hypothetical proteinchromosome 1 CDS326082 357 + 0.369748
SF3363 PBPRA0310 conserved hypothetical proteinchromosome 1 CDS325653 393 + 0.463104
SF3395 PBPRA2784 putative transport system permease proteinchromosome 1 CDS3230684 1302 - 0.484639
SF3395 PBPRA2772 hypothetical transport system permease proteinchromosome 1 CDS3217704 1302 - 0.491551
SF3852 PBPRA3543 putative exopolyphosphatasechromosome 1 CDS4006371 1494 + 0.463186
SMA1041 PBPRA0981 Hypothetical copper tolerance proteinchromosome 1 CDS1084150 480 - 0.452083
SMB20070 PBPRA2324 Putative sulfate permeasechromosome 1 CDS2675786 1062 + 0.429379
SMC00775 PBPRA3183 putative iron(III) ABC transporter, permease proteinchromosome 1 CDS3610385 1629 - 0.430325
SMC02283 PBPRA1002 Conserved hypothetical proteinchromosome 1 CDS1109413 549 - 0.431694
SO0028 PBPRA3583 Putative potassium uptake protein TrkHchromosome 1 CDS4049791 1446 + 0.451591
SO0695 PBPRA1028 putative glutathione-regulated potassium-efflux system protein KefBchromosome 1 CDS1140420 1587 - 0.425961
SO0971 PBPRA2066 conserved hypothetical proteinchromosome 1 CDS2380038 396 - 0.419192
SO3105 PBPRA0382 hypothetical phage shock protein Echromosome 1 CDS383636 390 - 0.369231
SO3905 PBPRA3323 hypothetical proteinchromosome 1 CDS3772474 651 - 0.447005
SO4291 PBPRA1393 putative phosphate ABC transporter, permease proteinchromosome 1 CDS1566434 960 - 0.421875
SO4502 PBPRA1869 hypothetical proteinchromosome 1 CDS2152932 915 + 0.445902
SODB PBPRA2578 putative superoxide dismutasechromosome 1 CDS2985330 585 + 0.454701
SP2086 PBPRA1392 putative phosphate ABC transporter, permease proteinchromosome 1 CDS1565538 891 - 0.426487
STM1084 PBPRA2191 putative sulfite reductasechromosome 1 CDS2520795 387 + 0.410853
STM1271 PBPRA2631 Conserved hypothetical proteinchromosome 1 CDS3046781 339 + 0.418879
STM1892 PBPRA1054 Putative zinc ABC transporter, ATP-binding proteinchromosome 1 CDS1172252 774 - 0.422481
STY0221 PBPRA1563 hypothetical iron(III) ABC transporter, permease proteinchromosome 1 CDS1775337 2049 - 0.467057
STY0974 PBPRA2807 putative formate transporter 1chromosome 1 CDS3253096 846 - 0.434988
STY3574 PBPRA0066 Putative potassium uptake protein TrkHchromosome 1 CDS67096 1458 + 0.432099
STY3981 PBPRA1521 putative multidrug resistance protein Dchromosome 1 CDS1721434 1209 + 0.432589
STY4291 PBPRA1058 putative ferrous iron transport protein Achromosome 1 CDS1175604 228 + 0.442982
T0111 PBPRA0412 putative thiamine ABC transporter,permease proteinchromosome 1 CDS417567 1644 - 0.44708
T0986 PBPRA1055 Hypothetical proteinchromosome 1 CDS1173034 369 + 0.390244
T1296 PBPRA2121 Hypothetical transport proteinchromosome 1 CDS2439892 1209 + 0.421009
T4029 PBPRA1426 putative nitrite transporterchromosome 1 CDS1599067 822 - 0.424574
TLR1740 PBPRA1059 Putative ferrous iron transport protein Bchromosome 1 CDS1175831 2274 + 0.41117
TM0501 PBPRA2935 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase componentchromosome 1 CDS3364207 987 - 0.422492
VCA0379 PBPRA1632 hypothetical proteinchromosome 1 CDS1863755 330 + 0.4
VP0295 PBPRA3309 putative sodium/sulfate symporterchromosome 1 CDS3756211 1764 - 0.413832
VP1374 PBPRA3373 putative transporterchromosome 1 CDS3813235 1416 + 0.451977
VP1897 PBPRA1844 Conserved hypothetical proteinchromosome 1 CDS2127842 321 + 0.367601
VP2469 PBPRA0598 conserved hypothetical proteinchromosome 1 CDS654638 909 + 0.464246
VP2857 PBPRA0233 Hypothetical periplasmic protein CpxPchromosome 1 CDS239289 483 + 0.449275
VPA0032 PBPRA2037 putative ABC transporterchromosome 1 CDS2353689 858 - 0.38345
VPA0825 PBPRA2769 hypothetical phosphoglycerate transport regulatory protein PgtCchromosome 1 CDS3212510 1260 + 0.39127
VPA0949 PBPRA1421 putative NADH oxidasechromosome 1 CDS1594724 1704 - 0.463028
VPA1081 PBPRA2693 conserved hypothetical proteinchromosome 1 CDS3124965 297 + 0.316498
VPA1184 PBPRA1886 hypothetical drug transport transmembrane proteinchromosome 1 CDS2170660 1203 + 0.41729
VPA1437 PBPRA1564 putative iron(III) ABC transporter, periplasmic iron-compound-binding proteinchromosome 1 CDS1777591 669 - 0.437967
VV0085 PBPRA3524 putative CyaY proteinchromosome 1 CDS3983688 318 + 0.440252
VV0578 PBPRA0446 hypothetical potassium channel proteinchromosome 1 CDS461342 816 - 0.39951
VV0730 PBPRA0730 putative ABC-type phosphate transport system,ATPase componentchromosome 1 CDS809737 819 + 0.437118
VV11252 PBPRA2569 Putative manganese superoxide dismutasechromosome 1 CDS2974959 612 + 0.434641
VV20541 PBPRA3000 conserved hypothetical proteinchromosome 1 CDS3443207 978 - 0.428425
VV21178 PBPRA0522 putative peptide ABC transporter, ATP-binding proteinchromosome 1 CDS551218 972 - 0.44856
VV3043 PBPRA0303 putative glutathione-regulated potassium-effluxsystem protein KefBchromosome 1 CDS319601 1803 + 0.457571
VV3080 PBPRA1216 putative transporterchromosome 1 CDS1367359 1416 + 0.424435
VVA0372 PBPRA1391 putative phosphate ABC transporter, ATP-binding proteinchromosome 1 CDS1564770 765 - 0.427451
VVA1086 PBPRA0530 putative chloride channel protein EriCchromosome 1 CDS564591 1404 + 0.448718
VVA1136 PBPRA3006 hypothetical multidrug resistance proteinchromosome 1 CDS3448198 1197 - 0.441103
XAC4365 PBPRA2002 Hypothetical transmembrane transportproteinchromosome 1 CDS2305594 954 + 0.409853
XCC2882 PBPRA3469 putative CysQ proteinchromosome 1 CDS3923801 834 - 0.450839
XCC3357 PBPRA2340 hypothetical transport proteinchromosome 1 CDS2696791 1407 - 0.432125
Y0323 PBPRA3466 hypothetical proteinchromosome 1 CDS3920930 375 - 0.418667
Y0410 PBPRA1220 putative cation transport ATPasechromosome 1 CDS1372544 2406 + 0.446384
Y0546 PBPRA2101 Putative heme iron utilization proteinchromosome 1 CDS2418674 519 - 0.402698
Y2029 PBPRA1134 putative oligopeptide ABC transporter,ATP-binding proteinchromosome 1 CDS1257501 966 + 0.425466
Y4020 PBPRA3582 Putative potassium uptake protein TrkAchromosome 1 CDS4048411 1377 + 0.458243
YADF PBPRA3179 putative Carbonic anhydrasechromosome 1 CDS3607107 657 + 0.459665
YAEC PBPRA2942 putative lipoprotein YaeCchromosome 1 CDS3372379 816 + 0.400735
YAEE PBPRA2941 putative ABC-type metal ion transport system,permease componentchromosome 1 CDS3371590 687 + 0.438137
YDCF PBPRA2241 putative ABC transporter, membrane-spanning permeasechromosome 1 CDS2579647 840 + 0.395238
YHEA PBPRA0317 putative bacterioferritin-associated ferredoxinchromosome 1 CDS331561 189 + 0.333333
YPO0491 PBPRA0401 putative ApaG proteinchromosome 1 CDS403120 384 - 0.416667
YPO2148 PBPRA0113 putative multidrug resistance proteinchromosome 1 CDS116135 1221 + 0.461097
YPO2184 PBPRA1133 Putative oligopeptide ABC transporterchromosome 1 CDS1256499 915 + 0.442623
YPO3039 PBPRA0852 putative NapD proteinchromosome 1 CDS940707 273 + 0.322344
YPO3203 PBPRA0723 putative phosphate-binding proteinchromosome 1 CDS800036 963 + 0.417445
Z2789 PBPRA1240 putative thiosulfate sulfur transferasechromosome 1 CDS1403095 1314 - 0.429224
Z3441 PBPRA1545 putative multidrug resistance proteinchromosome 1 CDS1752176 1215 + 0.432922
Z3441 PBPRA1548 hypothetical proteinchromosome 1 CDS1755558 591 + 0.423012
Z3696 PBPRA0860 putative TyrA proteinchromosome 1 CDS947546 897 + 0.409142
Z3906 PBPRA3044 putative Mg2+ and Co2+ transporter CorBchromosome 1 CDS3487023 1278 + 0.435837
Z4559 PBPRA3249 putative Ca2+/Na+ antiporterchromosome 1 CDS3683999 966 + 0.443064
Z5410 PBPRA3032 putative membrane proteinchromosome 1 CDS3474679 1293 + 0.422274
Z5645 PBPRA3326 putative zinc uptake regulation proteinchromosome 1 CDS3775256 447 + 0.389262
ZUNB PBPRA1053 putative ABC-type Mn2+/Zn2+ transport system, permease componentchromosome 1 CDS1171474 786 - 0.436387