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2024-05-14 01:04:36

Gene list

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COG category: Inorganic ion transport and metabolism
Genomic element: chromosome 2

Number of genes found: 127

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Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VPA0004 peptide ABC transporter, ATP-binding proteinchromosome 2 CDS4805 894 - 0.477629
VPA0051 NhaDchromosome 2 CDS40956 1266 - 0.507899
VPA0085 putative exported proteinchromosome 2 CDS75952 678 + 0.473451
VPA0089 putative siderophore utilization proteinchromosome 2 CDS82256 774 - 0.503876
VPA0098 putative efflux pump proteinchromosome 2 CDS89885 1491 + 0.488263
VPA0133 putative ABC transporter substrate-binding proteinchromosome 2 CDS124446 951 - 0.494217
VPA0134 ABC transporter permease proteinchromosome 2 CDS125419 801 - 0.493134
VPA0135 putative ABC transporter, ATP-binding proteinchromosome 2 CDS126212 759 - 0.511199
VPA0150 putative ferrichrome-iron receptorchromosome 2 CDS145430 2094 + 0.464183
VPA0159 hypothetical proteinchromosome 2 CDS153872 831 + 0.480144
VPA0162 putative adhesion proteinchromosome 2 CDS155639 927 + 0.472492
VPA0163 putative ATP-binding component of ABC transporterchromosome 2 CDS156565 735 + 0.482993
VPA0164 putative permease of ABC transporterchromosome 2 CDS157299 876 + 0.505708
VPA0165 hypothetical proteinchromosome 2 CDS158210 870 + 0.425287
VPA0168 multidrug resistance protein Dchromosome 2 CDS163045 1206 - 0.501658
VPA0221 carbonic anhydrasechromosome 2 CDS222105 720 - 0.469444
VPA0236 ABC transporter, periplasmic substrate-binding proteinchromosome 2 CDS241026 1011 + 0.468843
VPA0239 ABC transporter, permease proteinchromosome 2 CDS243790 1725 + 0.478261
VPA0242 hypothetical proteinchromosome 2 CDS247256 552 - 0.46558
VPA0255 hypothetical proteinchromosome 2 CDS260010 843 + 0.44484
VPA0277 conserved hypothetical proteinchromosome 2 CDS278978 1800 + 0.486111
VPA0284 phage shock protein Echromosome 2 CDS285765 351 - 0.472934
VPA0305 catalasechromosome 2 CDS304869 1542 + 0.464332
VPA0320 putative lipoproteinchromosome 2 CDS318146 525 - 0.455238
VPA0333 conserved hypothetical proteinchromosome 2 CDS326797 1209 - 0.468983
VPA0354 putative periplasmic solute-binding proteinchromosome 2 CDS345644 1083 - 0.481071
VPA0417 hypothetical proteinchromosome 2 CDS411667 600 - 0.471667
VPA0421 hemin ABC transporter, ATP-binding protein HutDchromosome 2 CDS414221 747 - 0.507363
VPA0422 putative hemin ABC transporter, permease proteinchromosome 2 CDS415003 1038 - 0.501927
VPA0423 hemin ABC transporter, periplasmic hemin-binding protein HutBchromosome 2 CDS416050 870 - 0.501149
VPA0428 conserved hypothetical proteinchromosome 2 CDS420347 516 + 0.468992
VPA0429 conserved hypothetical proteinchromosome 2 CDS420981 531 + 0.455744
VPA0446 putative methylamine utilization protein MauG precursorchromosome 2 CDS436280 1236 + 0.464401
VPA0453 catalase/peroxidasechromosome 2 CDS446097 2166 - 0.509695
VPA0454 putative DNA-binding stress proteinchromosome 2 CDS448389 471 - 0.498938
VPA0464 putative TrkA family proteinchromosome 2 CDS458551 1959 - 0.486983
VPA0478 putative oxidoreductasechromosome 2 CDS478357 1356 + 0.490413
VPA0479 hypothetical proteinchromosome 2 CDS479832 582 - 0.460481
VPA0480 putative cation efflux system transmembrane proteinchromosome 2 CDS480478 3141 - 0.504298
VPA0496 putative heavy metal membrane efflux proteinchromosome 2 CDS502620 1056 - 0.463068
VPA0520 multidrug resistance protein Dchromosome 2 CDS526902 1194 + 0.457286
VPA0563 DPS family proteinchromosome 2 CDS563295 480 + 0.43125
VPA0572 putative cation efflux system componentchromosome 2 CDS571441 897 - 0.432553
VPA0595 ATP-binding component of molybdate transport systemchromosome 2 CDS595719 1455 - 0.462543
VPA0600 putative arylsulfatase AtsDchromosome 2 CDS600277 2370 - 0.467511
VPA0604 ABC transporter, periplasmic substrate-binding proteinchromosome 2 CDS606160 828 - 0.452899
VPA0657 iron(III) ABC transporter, periplasmic iron-compound-binding proteinchromosome 2 CDS660042 909 + 0.441144
VPA0658 iron(III) ABC transporter, permease proteinchromosome 2 CDS660973 936 + 0.469017
VPA0659 iron(III) ABC transporter, permease proteinchromosome 2 CDS661901 951 + 0.43428
VPA0660 iron(III) ABC transporter, ATP-binding proteinchromosome 2 CDS662854 756 + 0.453704
VPA0664 putaive Fe-regulated protein B precursorchromosome 2 CDS665354 2007 + 0.470354
VPA0679 arylsulfatasechromosome 2 CDS700792 1548 + 0.472222
VPA0680 arylsulfatasechromosome 2 CDS702649 1548 + 0.475452
VPA0683 putative arylsulfatase proteinchromosome 2 CDS707657 1527 + 0.45907
VPA0701 putative oxalate/formate antiporterchromosome 2 CDS726618 1233 - 0.479319
VPA0756 molecular chaperone SugEchromosome 2 CDS787560 315 + 0.450794
VPA0762 putative 2-oxoglutarate/malate translocatorchromosome 2 CDS792191 1404 - 0.492877
VPA0768 catalase/peroxidasechromosome 2 CDS798566 2175 + 0.497011
VPA0778 putataive Mg transporter MgtEchromosome 2 CDS808075 1353 + 0.467849
VPA0799 hypothetical proteinchromosome 2 CDS826042 666 - 0.403904
VPA0825 putative phosphoglycerate transport regulatory protein PgtCchromosome 2 CDS857166 1299 + 0.47729
VPA0853 putataive membrane protein YcdZchromosome 2 CDS888715 483 + 0.440994
VPA0856 putative transmembrane transport proteinchromosome 2 CDS893624 957 + 0.45559
VPA0858 phnA proteinchromosome 2 CDS895211 558 - 0.451613
VPA0882 heme transport protein HutAchromosome 2 CDS924558 2082 - 0.434198
VPA0929 molybdenum ABC transporter, ATP-binding proteinchromosome 2 CDS962151 1107 - 0.443541
VPA0930 molybdenum ABC transporter, permease proteinchromosome 2 CDS963254 690 - 0.453623
VPA0931 molybdenum ABC transporter, periplasmic molybdenum-binding proteinchromosome 2 CDS963971 756 - 0.455026
VPA0948 conserved hypothetical proteinchromosome 2 CDS981839 210 + 0.395238
VPA0949 putative NADH oxidasechromosome 2 CDS982120 1704 + 0.481221
VPA0958 putative NADH oxidasechromosome 2 CDS999917 405 + 0.459259
VPA0973 putative MFS family transport proteinchromosome 2 CDS1018868 1161 + 0.481481
VPA0979 ferric aerobactin receptor precursorchromosome 2 CDS1023626 2178 - 0.468779
VPA0985 putative formate dehydrogenasechromosome 2 CDS1030493 849 - 0.479388
VPA0986 nitrite reductase (NAD(P)H), small subunitchromosome 2 CDS1031544 330 - 0.481818
VPA1016 multidrug resistance protein Dchromosome 2 CDS1069624 1134 - 0.448854
VPA1054 putative nitrite reductase NADPH (small subunit) oxidoreductase proteinchromosome 2 CDS1111677 336 - 0.470238
VPA1056 nitrate transporter ATPase component NasDchromosome 2 CDS1114543 837 - 0.492234
VPA1057 putative nitrate transporterchromosome 2 CDS1115391 924 - 0.484848
VPA1058 putative nitrate transport proteinchromosome 2 CDS1116437 1365 - 0.483516
VPA1073 putative alkaline phosphatasechromosome 2 CDS1132255 1290 - 0.471318
VPA1101 putative cytochrome c551 peroxidasechromosome 2 CDS1161294 963 - 0.471443
VPA1131 putative periplasmic binding protein-related proteinchromosome 2 CDS1197387 918 - 0.449891
VPA1166 conserved hypothetical proteinchromosome 2 CDS1231559 1404 + 0.504986
VPA1167 conserved hypothetical proteinchromosome 2 CDS1233388 966 + 0.47412
VPA1168 hypothetical proteinchromosome 2 CDS1234401 1239 - 0.488297
VPA1175 putative thiosulfate sulfurtransferase SseAchromosome 2 CDS1242081 831 + 0.430806
VPA1184 putative drug transport transmembrane proteinchromosome 2 CDS1253136 1179 - 0.469042
VPA1198 NapD proteinchromosome 2 CDS1271472 309 + 0.411003
VPA1217 hypothetical proteinchromosome 2 CDS1289874 1038 - 0.463391
VPA1240 putative magnesium transporter MgtEchromosome 2 CDS1314047 1347 + 0.480327
VPA1244 hypothetical proteinchromosome 2 CDS1318782 183 - 0.398907
VPA1283 putative MFS transporterchromosome 2 CDS1361618 1215 + 0.463374
VPA1287 putative transporterchromosome 2 CDS1365096 915 - 0.44918
VPA1306 hypothetical proteinchromosome 2 CDS1383719 810 - 0.448148
VPA1307 putative adhesion proteinchromosome 2 CDS1384525 948 - 0.468354
VPA1383 putative membrane proteinchromosome 2 CDS1455413 285 - 0.4
VPA1413 hypothetical proteinchromosome 2 CDS1486671 402 + 0.440298
VPA1418 catalasechromosome 2 CDS1490301 1440 + 0.488194
VPA1430 putative Na+-transporting ATP synthasechromosome 2 CDS1505793 1365 - 0.486447
VPA1431 putative potassium uptake proteinchromosome 2 CDS1507159 654 - 0.48318
VPA1435 putative iron(III) compound receptorchromosome 2 CDS1511925 2091 + 0.483022
VPA1436 iron(III) ABC transporter, ATP-binding proteinchromosome 2 CDS1514068 786 + 0.501272
VPA1437 iron(III) ABC transporter, periplasmic iron-compound-binding proteinchromosome 2 CDS1514844 930 + 0.487097
VPA1438 iron(III) ABC transporter, permease proteinchromosome 2 CDS1515770 1968 + 0.498984
VPA1458 phosphate ABC transporter, ATP-binding proteinchromosome 2 CDS1553076 750 - 0.481333
VPA1459 phosphate ABC transporter, permease proteinchromosome 2 CDS1553886 864 - 0.459491
VPA1460 phosphate ABC transporter, permease proteinchromosome 2 CDS1554772 933 - 0.488746
VPA1461 phosphate ABC transporter, periplasmic phosphate-binding proteinchromosome 2 CDS1555804 822 - 0.452555
VPA1466 putative TonB system receptorchromosome 2 CDS1563041 2139 - 0.476858
VPA1482 ABC transporter, ATP-binding proteinchromosome 2 CDS1582304 1740 + 0.47069
VPA1483 putative ABC transporter membrane-spanning permeasechromosome 2 CDS1584040 840 + 0.464286
VPA1484 hypothetical proteinchromosome 2 CDS1584962 1182 - 0.468697
VPA1502 carbonic anhydrasechromosome 2 CDS1606278 717 - 0.453278
VPA1514 superoxide dismutase, Cu-Znchromosome 2 CDS1620670 516 + 0.525194
VPA1574 putative membrane transport proteinchromosome 2 CDS1670691 1191 + 0.47691
VPA1582 hypothetical proteinchromosome 2 CDS1679163 699 + 0.460658
VPA1605 hypothetical proteinchromosome 2 CDS1704585 390 - 0.423077
VPA1647 hypothetical multidrug resistance protein Dchromosome 2 CDS1757631 1209 + 0.501241
VPA1652 ATP-binding component of citrate-dependent iron(III) transport proteinchromosome 2 CDS1767656 765 - 0.482353
VPA1653 putative ferrichrome ABC transporter (permease)chromosome 2 CDS1768423 972 - 0.519547
VPA1654 putative ferrichrome ABC transporter (permease)chromosome 2 CDS1769391 1038 - 0.522158
VPA1655 putative FecBchromosome 2 CDS1770425 924 - 0.477273
VPA1656 ferric vibrioferrin receptorchromosome 2 CDS1771450 2139 - 0.498364
VPA1657 ferric siderophore receptor homologchromosome 2 CDS1773711 2037 - 0.510064
VPA1660 putative transport proteinchromosome 2 CDS1779042 1206 + 0.503317
VPA1691 hypothetical proteinchromosome 2 CDS1809953 696 + 0.45546