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2024-05-13 16:50:09

Gene list

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COG category: Inorganic ion transport and metabolism
Genomic element: chromosome 1

Number of genes found: 134

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Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VP0032 potassium uptake protein TrkHchromosome 1 CDS31182 1458 + 0.477366
VP0049 peptide ABC transporter, permease proteinchromosome 1 CDS55702 1029 + 0.48105
VP0050 peptide ABC transporter, permease proteinchromosome 1 CDS56733 957 + 0.497388
VP0060 putative multidrug transmembrane resistance signal peptide proteinchromosome 1 CDS69154 405 + 0.471605
VP0061 putative multidrug transmembrane resistance signal peptide proteinchromosome 1 CDS69555 330 + 0.484848
VP0077 ferritinchromosome 1 CDS88446 528 + 0.422348
VP0089 hypothetical proteinchromosome 1 CDS97693 513 + 0.500975
VP0144 CysQ proteinchromosome 1 CDS154302 828 - 0.495169
VP0168 hypothetical proteinchromosome 1 CDS180055 2601 - 0.445982
VP0173 oligopeptide ABC transporter, ATP-binding proteinchromosome 1 CDS187439 840 + 0.475
VP0293 sulfate adenylate transferase, subunit 1chromosome 1 CDS290196 1431 + 0.472397
VP0295 putative sodium/sulfate symporterchromosome 1 CDS291858 1725 + 0.473043
VP0296 adenylylsulfate kinasechromosome 1 CDS293607 618 + 0.467638
VP0317 putative thiamine ABC transporter, permease proteinchromosome 1 CDS312828 1587 + 0.465028
VP0335 ApaG proteinchromosome 1 CDS328139 381 - 0.440945
VP0379 putative ABC transporter substrate binding proteinchromosome 1 CDS379675 804 - 0.455224
VP0418 pho4 family proteinchromosome 1 CDS417899 1260 - 0.474603
VP0419 conserved hypothetical proteinchromosome 1 CDS419289 687 - 0.452693
VP0422 putative potassium channel proteinchromosome 1 CDS421780 819 - 0.43956
VP0477 conserved hypothetical proteinchromosome 1 CDS483590 828 - 0.449275
VP0526 NptA proteinchromosome 1 CDS543172 1149 - 0.451697
VP0571 putative phosphate ABC transporter, periplasmic phosphate-binding proteinchromosome 1 CDS594231 960 + 0.477083
VP0572 exopolyphosphatasechromosome 1 CDS595216 1506 - 0.47344
VP0573 polyphosphate kinasechromosome 1 CDS596705 2091 - 0.451459
VP0575 phosphate ABC transporter, permease proteinchromosome 1 CDS601239 1674 + 0.479689
VP0576 phosphate ABC transporter, ATP-binding proteinchromosome 1 CDS602915 819 + 0.449328
VP0577 phosphate transport system regulatory protein PhoUchromosome 1 CDS603764 699 + 0.457797
VP0579 copper homeostasis proteinchromosome 1 CDS605369 744 - 0.483871
VP0637 hypothetical proteinchromosome 1 CDS668498 741 - 0.438596
VP0691 thiamin biosynthesis protein ThiIchromosome 1 CDS723376 1449 + 0.456867
VP0704 lipoprotein YaeCchromosome 1 CDS738409 810 - 0.454321
VP0705 ABC transporter, permease proteinchromosome 1 CDS739251 678 - 0.482301
VP0706 ABC transporter, ATP-binding proteinchromosome 1 CDS739918 1035 - 0.476328
VP0730 putative hemolysinchromosome 1 CDS766326 900 - 0.457778
VP0758 cation transport ATPase, E1-E2 familychromosome 1 CDS795646 2736 - 0.482822
VP0810 putative PTS system mannose-specific, factor IICchromosome 1 CDS842971 735 + 0.482993
VP0827 putative glutathione-regulated potassium-efflux system protein KefBchromosome 1 CDS857299 1590 - 0.450314
VP0833 ferric uptake regulatory proteinchromosome 1 CDS865420 450 - 0.433333
VP0851 zinc ABC transporter, permease proteinchromosome 1 CDS884002 786 - 0.464377
VP0852 zinc ABC transporter, ATP-binding proteinchromosome 1 CDS884780 789 - 0.449937
VP0853 zinc ABC transporter, periplasmic zinc-binding proteinchromosome 1 CDS885647 879 + 0.455063
VP0857 ferrous iron transport protein Achromosome 1 CDS890989 228 + 0.421053
VP0858 ferrous iron transport protein Bchromosome 1 CDS891216 2277 + 0.447079
VP0904 KtrAchromosome 1 CDS936564 663 + 0.473605
VP0905 KtrBchromosome 1 CDS937223 1368 + 0.490497
VP0959 cation transport ATPase, E1-E2 familychromosome 1 CDS999855 2307 + 0.485479
VP1064 putative eukaryotic-type potassium channelschromosome 1 CDS1113666 1044 + 0.457854
VP1070 conserved hypothetical proteinchromosome 1 CDS1120488 450 + 0.444444
VP1124 hypothetical proteinchromosome 1 CDS1182719 513 + 0.454191
VP1157 putative formate transporter 1chromosome 1 CDS1213011 861 + 0.465738
VP1200 putative thiosulfate sulfurtransferasechromosome 1 CDS1261831 984 - 0.5
VP1216 multidrug resistance proteinchromosome 1 CDS1276713 1239 + 0.483454
VP1228 Na+/H+-antiporter proteinchromosome 1 CDS1293410 1152 + 0.463542
VP1256 transporter, NadC familychromosome 1 CDS1327132 1371 - 0.475565
VP1262 putative alkaline phosphatasechromosome 1 CDS1335830 1674 + 0.481481
VP1288 hypothetical proteinchromosome 1 CDS1366758 1179 + 0.442748
VP1289 GGDEF family proteinchromosome 1 CDS1368111 1146 + 0.424084
VP1315 putative multidrug resistance proteinchromosome 1 CDS1394657 1224 - 0.469771
VP1344 oligopeptide ABC transporter, ATP-binding proteinchromosome 1 CDS1425221 1107 - 0.505872
VP1345 oligopeptide ABC transporter, permease proteinchromosome 1 CDS1426215 933 - 0.496249
VP1346 oligopeptide ABC transporter, permease proteinchromosome 1 CDS1427157 921 - 0.508143
VP1372 hypothetical proteinchromosome 1 CDS1456263 339 + 0.439528
VP1374 putative transporterchromosome 1 CDS1457257 1476 + 0.47832
VP1383 conserved hypothetical transmembrane proteinchromosome 1 CDS1468883 753 + 0.444887
VP1421 hypothetical proteinchromosome 1 CDS1527691 294 + 0.455782
VP1444 hypothetical proteinchromosome 1 CDS1551871 1950 - 0.461026
VP1498 ABC transporter, ATP-binding proteinchromosome 1 CDS1608157 720 - 0.448611
VP1523 putative ammonium transporter Amtchromosome 1 CDS1634487 1284 + 0.450156
VP1538 FixS-related proteinchromosome 1 CDS1648625 165 - 0.387879
VP1539 cation transport ATPase, E1-E2 familychromosome 1 CDS1648804 2364 - 0.437817
VP1626 sulfite reductase, gamma subunit-related proteinchromosome 1 CDS1725528 330 + 0.418182
VP1718 cytochrome c551 peroxidasechromosome 1 CDS1831250 1035 + 0.45314
VP1753 putative alkylphosphonate ABC tranporterchromosome 1 CDS1866806 930 + 0.450538
VP1783 hypothetical proteinchromosome 1 CDS1899108 501 - 0.413174
VP1920 putative iron-regulated protein Achromosome 1 CDS2005874 1290 - 0.472093
VP1926 nitrate reductase, formate dependent (NrfD)chromosome 1 CDS2011340 972 - 0.450617
VP1929 nitrite reductase periplasmic cytochrome c552chromosome 1 CDS2014049 1428 + 0.477591
VP2063 sulfate permease family proteinchromosome 1 CDS2164832 1560 + 0.469872
VP2072 Na+/H+-exchanging proteinchromosome 1 CDS2176704 1587 + 0.456837
VP2088 oligopeptide ABC transporter, ATP-binding proteinchromosome 1 CDS2196265 975 - 0.470769
VP2089 oligopeptide ABC transporter, permease proteinchromosome 1 CDS2197264 903 - 0.468439
VP2090 oligopeptide ABC transporter, permease proteinchromosome 1 CDS2198182 921 - 0.444083
VP2118 manganese superoxide dismutase Mn-SODchromosome 1 CDS2223415 600 + 0.475
VP2123 putative potassium channelchromosome 1 CDS2229880 858 + 0.455711
VP2163 alkaline phosphatasechromosome 1 CDS2276390 1578 + 0.463878
VP2262 TyrA proteinchromosome 1 CDS2375914 903 - 0.465116
VP2268 putative arsenate reductasechromosome 1 CDS2378802 351 + 0.430199
VP2279 arsenate reductasechromosome 1 CDS2388122 351 + 0.42735
VP2290 sulfate permease family proteinchromosome 1 CDS2399794 1776 + 0.493243
VP2356 putative AmpG proteinchromosome 1 CDS2466839 1353 + 0.469327
VP2377 conserved hypothetical proteinchromosome 1 CDS2493181 975 - 0.476923
VP2389 putative membrane transport proteinchromosome 1 CDS2505824 948 + 0.456751
VP2390 conserved hypothetical proteinchromosome 1 CDS2506848 1185 - 0.486076
VP2407 chromate resistance protein-related proteinchromosome 1 CDS2526622 1140 + 0.514912
VP2469 hypothetical proteinchromosome 1 CDS2592348 945 - 0.461376
VP2480 peptide ABC transporter, permease proteinchromosome 1 CDS2611402 987 + 0.452888
VP2481 peptide ABC transporter, permease proteinchromosome 1 CDS2612391 1026 + 0.47271
VP2482 peptide ABC transporter, ATP-binding proteinchromosome 1 CDS2613419 984 + 0.474593
VP2490 iron(III) ABC transporter, permease proteinchromosome 1 CDS2625266 1626 - 0.47048
VP2491 iron(III) ABC transporter, periplasmic iron-compound-binding proteinchromosome 1 CDS2626991 1014 - 0.445759
VP2492 putative ammonium transporterchromosome 1 CDS2628155 1230 - 0.478049
VP2513 sulfate permease family proteinchromosome 1 CDS2649669 1671 - 0.497307
VP2514 putative carbonic anhydrasechromosome 1 CDS2651623 669 + 0.436472
VP2536 putative hemolysinchromosome 1 CDS2674301 1281 + 0.451991
VP2602 iron-regulated outer membrane virulence protein homologchromosome 1 CDS2745069 1959 - 0.469627
VP2665 putative sodium/calcium exchanger proteinchromosome 1 CDS2815056 966 + 0.456522
VP2675 magnesium transporterchromosome 1 CDS2822539 1356 + 0.5059
VP2681 putative manganese transporterchromosome 1 CDS2828103 1266 + 0.504739
VP2718 putative Na+/H+ antiporterchromosome 1 CDS2879413 1335 + 0.435955
VP2721 sulfite reductase (NADPH) hemoprotein beta-componentchromosome 1 CDS2888450 1737 - 0.467473
VP2722 sulfite reductase (NADPH) flavoprotein alpha-componentchromosome 1 CDS2890186 1872 - 0.451923
VP2729 putative zinc uptake regulation proteinchromosome 1 CDS2894971 465 + 0.427957
VP2768 bacterioferritinchromosome 1 CDS2937425 477 - 0.42348
VP2769 bacterioferritin-associated ferredoxinchromosome 1 CDS2937994 189 - 0.412698
VP2774 hypothetical proteinchromosome 1 CDS2943215 276 - 0.449275
VP2775 putative oxidation of intracellular sulfurchromosome 1 CDS2943498 357 - 0.464986
VP2776 conserved hypothetical proteinchromosome 1 CDS2943851 396 - 0.469697
VP2785 glutathione-regulated potassium-efflux system protein KefBchromosome 1 CDS2949295 1797 - 0.488592
VP2826 putative transporterchromosome 1 CDS2993113 1416 + 0.482345
VP2830 conserved hypothetical proteinchromosome 1 CDS2999882 435 + 0.411494
VP2856 putative CDF family transport proteinchromosome 1 CDS3023234 909 - 0.493949
VP2857 putative periplasmic protein CpxPchromosome 1 CDS3024258 513 - 0.473684
VP2860 superoxide dismutase, Mnchromosome 1 CDS3027126 609 + 0.505747
VP2867 putative sodium/hydrogen exchangerchromosome 1 CDS3035138 1746 - 0.501145
VP2875 putative transport permease proteinchromosome 1 CDS3045523 1191 - 0.510495
VP2940 conserved hypothetical proteinchromosome 1 CDS3144513 366 - 0.418033
VP2952 GlpE proteinchromosome 1 CDS3156029 321 - 0.476636
VP2968 putative transporterchromosome 1 CDS3167175 1218 - 0.494253
VP2986 CyaY proteinchromosome 1 CDS3184779 315 + 0.450794
VP3003 guanosine-5'-triphosphate,3'-diphosphatepyrophos phatasechromosome 1 CDS3206155 1494 + 0.487282
VP3019 putative multidrug resistance proteinchromosome 1 CDS3221634 1161 - 0.487511
VP3045 potassium uptake protein TrkAchromosome 1 CDS3251803 1377 + 0.534495
VP3046 potassium uptake protein TrkHchromosome 1 CDS3253189 1446 + 0.514523
VP3064 multidrug resistance proteinchromosome 1 CDS3272605 1206 + 0.47927