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2024-05-04 06:45:55

Gene list

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COG category: Inorganic ion transport and metabolism
Organism: Pseudoalteromonas haloplanktis TAC125, TAC125

Number of genes found: 193

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Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSHAa2137 putative protein with ferredoxin subunitschromosome I CDS2261481 1095 + 0.459361
NA PSHAa2947 putative TonB-dependent receptorchromosome I CDS3122604 2292 + 0.435864
NA PSHAa1612 putative ABC-type transport system, periplasmic componentchromosome I CDS1674883 1041 + 0.454371
NA PSHAa2173 putative transporterchromosome I CDS2309566 1194 + 0.404523
NA PSHAa2457 putative TonB-dependent receptorchromosome I CDS2605947 2940 + 0.404082
NA PSHAa1987 putative TonB-dependent receptor proteinchromosome I CDS2092118 2937 - 0.400749
NA PSHAa2977 secreted alkaline phosphatasechromosome I CDS3164130 1590 - 0.451572
NA PSHAa2478 putative TonB-dependent receptor proteinchromosome I CDS2627601 2157 + 0.428836
NA PSHAa2767 conserved protein of unknown functionchromosome I CDS2940866 1095 - 0.385388
NA PSHAa2835 conserved protein of unknown function ; hypothetical transmembrane proteinchromosome I CDS3008535 189 + 0.375661
NA PSHAb0360 putative permeasechromosome II CDS419366 282 + 0.312057
NA PSHAa0277 putative sodium/hydrogen antiporterchromosome I CDS291391 1848 - 0.41829
NA PSHAa1403 Sulfate permease family proteinchromosome I CDS1470416 1557 + 0.408478
NA PSHAa1684 conserved protein of unknown functionchromosome I CDS1763053 354 + 0.403955
NA PSHAb0504 putative potassium channel proteinchromosome II CDS570188 1176 + 0.386905
NA PSHAa1626 sodium ABC exporter ATP-binding proteinchromosome I CDS1693448 789 - 0.39924
NA PSHAa1746 putative hexuronate transport protein (MFS family)chromosome I CDS1829626 1308 - 0.425076
NA PSHAa0372 putative transport proteinchromosome I CDS387676 849 + 0.441696
NA PSHAa2010 putative Glutathione-regulated potassium-efflux system protein KefBchromosome I CDS2120488 1974 - 0.400709
NA PSHAa1687 conserved protein of unknown function ; putative anaerobic sulfite reductase gamma subunitchromosome I CDS1764050 330 + 0.375758
NA PSHAb0555 putative Na+/H+ antiporter, may regulate cell volume and cold resistancechromosome II CDS621761 1194 + 0.328308
NA PSHAa1686 conserved protein of unknown functionchromosome I CDS1763756 291 + 0.371134
NA PSHAb0341 putative outer membrane protein with a TonB boxchromosome II CDS395112 3207 - 0.383536
NA PSHAa2836 conserved protein of unknown functionchromosome I CDS3008727 345 + 0.443478
NA PSHAa0108 putative TonB-dependent receptor; putative outer membrane bound protein involved in iron chelated transportchromosome I CDS111581 2076 - 0.41474
NA PSHAb0299 putative TonB-dependent outer membrane receptorchromosome II CDS349494 2583 - 0.415021
NA PSHAb0496 putative Na+/H+ antiporterchromosome II CDS559828 1296 - 0.396605
NA PSHAb0364 putative sodium-dependent transporter (di-or tri-carboxylates)chromosome II CDS424043 1476 + 0.426152
NA PSHAb0343 putative membrane proteinchromosome II CDS399426 891 + 0.346801
NA PSHAa2579 putative transporter proteinchromosome I CDS2724992 972 + 0.406379
NA PSHAb0274 putative CzcD, Co/Zn/Cd efflux system component proteinchromosome II CDS319444 891 + 0.367003
NA PSHAb0183 putative transporterchromosome II CDS221736 1227 + 0.405868
NA PSHAa2706 putative transporter (MFS family)chromosome I CDS2867138 1368 - 0.42617
NA PSHAb0512 putative Ton-B dependent protein (could be involved in iron transport)chromosome II CDS576741 2421 - 0.403552
NA PSHAa1584 putative TonB-dependent receptor for ferrichrome transportchromosome I CDS1648269 2112 - 0.408144
NA PSHAa2407 putative TonB-dependent receptor proteinchromosome I CDS2555916 2067 + 0.445089
NA PSHAb0282 putative Bacterioferritin-associated ferredoxinchromosome II CDS329582 195 + 0.379487
NA PSHAa1825 putative transmembrane sensorchromosome I CDS1917302 1077 - 0.392758
NA PSHAa0376 conserved protein of unknown function ; putative CpxP (P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated) domaichromosome I CDS392345 486 + 0.411523
NA PSHAa1888 putative cyanophycinasechromosome I CDS1989329 1644 - 0.394161
NA PSHAa2119 putative TonB-dependent receptorchromosome I CDS2238987 2187 - 0.40695
NA PSHAb0539 putative protein involved in iron transportchromosome II CDS603532 732 + 0.428962
NA PSHAa2614 putative potassium channel proteinchromosome I CDS2759803 954 + 0.41195
NA PSHAb0527 putative TonB-dependent receptorchromosome II CDS594147 2682 + 0.420209
NA PSHAa1005 Putative pH adaptation potassium efflux proteinchromosome I CDS1045464 300 + 0.4
NA PSHAa1009 putative multiple resistance/pH regulation related protein Gchromosome I CDS1048086 330 + 0.354545
NA PSHAa2976 alkaline phosphatasechromosome I CDS3162325 1794 - 0.440357
NA PSHAa2138 putative TonB-dependent receptorchromosome I CDS2262655 2169 - 0.423698
NA PSHAa1847 Cation transport ATPase, E1-E2 familychromosome I CDS1942281 2376 + 0.402357
NA PSHAa1848 putative cytochrome oxidase maturation protein, cbb3-type (partial match)chromosome I CDS1944653 168 + 0.303571
NA PSHAb0033 putative membrane proteinchromosome II CDS38578 621 + 0.407407
NA PSHAa0442 putative transport protein (MFS family)chromosome I CDS460808 1296 - 0.445216
NA PSHAa1133 putative arsenate reductase with thioredoxin-like domainchromosome I CDS1174173 348 - 0.387931
NA PSHAa2545 putative Na:Ca transport protein (CacA family)chromosome I CDS2694677 1068 + 0.386704
NA PSHAa2973 putative secreted TonB-dependent receptorchromosome I CDS3156794 2532 + 0.444313
NA PSHAa0599 putative phosphate ABC transporterchromosome I CDS626436 969 + 0.407637
NA PSHAa2972 conserved protein of unknown function ; putative secreted proteinchromosome I CDS3155660 843 + 0.423488
NA PSHAa0939 putative membrane proteinchromosome I CDS969975 1179 - 0.403732
NA PSHAa0039 conserved protein of unknown function , putative integral inner membrane proteinchromosome I CDS41950 900 + 0.412222
NA PSHAa2702 cytochrome-c peroxidasechromosome I CDS2859375 1161 - 0.402239
NA PSHAa1989 conserved protein of unknown functionchromosome I CDS2096858 2643 - 0.402573
NA PSHAa1271 putative TonB-dependent receptorchromosome I CDS1326746 2583 - 0.44638
NA PSHAa1242 putative orphan proteinchromosome I CDS1294416 1869 - 0.430177
NA PSHAa2180 putative TonB-dependent receptorchromosome I CDS2315348 2463 - 0.411287
NA PSHAa2252 putative Voltage-gated ClC-type chloride channel clcAchromosome I CDS2389357 1683 + 0.417706
NA PSHAa2556 putative magnesium transporterchromosome I CDS2702753 1359 + 0.448859
NA PSHAb0023 putative membrane proteinchromosome II CDS29277 1518 - 0.453228
NA PSHAa1084 conserved protein of unknown function ; putative inner membrane proteinchromosome I CDS1123266 345 + 0.365217
NA PSHAa2206 putative TonB-dependent receptorchromosome I CDS2341776 2127 - 0.397743
NA PSHAa1008 putative pH adaptation potassium efflux system protein Fchromosome I CDS1047807 270 + 0.351852
NA PSHAa1415 conserved protein of unknown function ; putative outer membrane proteinchromosome I CDS1485679 2370 - 0.408017
NA PSHAa1259 putative transport protein of the major facilitator familychromosome I CDS1315522 1170 - 0.426496
NA PSHAa1571 conserved protein of unknown functionchromosome I CDS1638255 225 - 0.333333
NA PSHAa1685 conserved protein of unknown functionchromosome I CDS1763421 339 + 0.365782
NA PSHAa0840 conserved protein of unknown function ; putative TonB-dependent receptorchromosome I CDS867767 2589 - 0.427192
NA PSHAa1682 putative membrane proteinchromosome I CDS1761251 381 - 0.380577
NA PSHAb0286 putative TonB dependent outer membrane receptorchromosome II CDS331060 2136 - 0.400749
NA PSHAa2562 putative ABC transporter, periplasmic substrate-binding proteinchromosome I CDS2708415 876 - 0.40411
NA PSHAa0569 conserved protein of unknown function; putative membrane proteinchromosome I CDS589087 375 - 0.408
NA PSHAb0529 putative cation transporter componentchromosome II CDS598318 813 - 0.398524
NA PSHAb0288 putative cation efflux proteinchromosome II CDS334431 864 - 0.378472
NA PSHAa2458 putative sulfate permease family proteinchromosome I CDS2609040 1740 + 0.418966
NA PSHAa1613 putative ABC-type transport system, permease componentchromosome I CDS1675923 1500 + 0.45
NA PSHAa1352 putative TonB-dependent receptor proteinchromosome I CDS1406293 2808 + 0.410613
NA PSHAa2843 putative Chromate/sulfate transporterchromosome I CDS3013822 1152 + 0.431424
NA PSHAa2144 putative transporterchromosome I CDS2270835 1224 + 0.441993
NA PSHAa0695 putative outer membrane receptor for ferric iron uptake ; putative TonB-dependent receptorchromosome I CDS721479 2121 - 0.397925
NA PSHAb0279 putative outer membrane receptorchromosome II CDS326197 2178 + 0.408632
NA PSHAa0283 putative transport protein (MFS family)chromosome I CDS297787 1149 - 0.40557
NA PSHAa1231 conserved protein of unknown functionchromosome I CDS1281598 846 + 0.413712
NA PSHAa2257 putative Ammonium/methylammonium transporter amtBchromosome I CDS2396535 1230 - 0.426829
NA PSHAa1705 putative manganese/divalent cation transport protein (NRAMP family)chromosome I CDS1784035 1200 + 0.423333
NA PSHAa1740 putative TonB-dependent receptorchromosome I CDS1822126 3051 - 0.40118
NA PSHAa0082 putative exporter protein (SMR family)chromosome I CDS88953 309 + 0.420712
NA PSHAa0876 conserved protein of unknown function; could be a lipoprotein or a secreted protein; could be a binding protein for a transporterchromosome I CDS902634 2358 - 0.407125
NA PSHAa0300 conserved protein of unknown function ; putative PhnA protein(yjdM)chromosome I CDS311815 567 - 0.417989
NA PSHAb0500 putative alkaline phosphatasechromosome II CDS564586 1290 - 0.407752
NA PSHAa0137 putative potassium channelchromosome I CDS149300 1071 + 0.404295
NA PSHAa1625 putative ABC-type Na+ efflux pump, permease componentchromosome I CDS1692247 1209 - 0.382961
NA PSHAa1840 putative TonB-dependent receptorchromosome I CDS1934259 2448 - 0.390931
NA PSHAb0158 putative TonB-dependent receptor with TonB-boxchromosome II CDS193153 2832 - 0.424788
NA PSHAa2974 putative protein TrkB involved in potassium or sodium transport (efflux)chromosome I CDS3159609 1893 + 0.414157
NA PSHAa1824 putative ferric enterobactin receptorchromosome I CDS1914257 3000 - 0.418333
NA PSHAa0712 putative Magnesium transporterchromosome I CDS747341 1353 + 0.402069
NA PSHAa2765 beta-carbonic anhydrasechromosome I CDS2938949 660 - 0.398485
NA PSHAa1862 putative TonB-dependent receptorchromosome I CDS1963124 2370 - 0.43038
NA PSHAa0314 putative inorganic phosphate transporterchromosome I CDS328169 1206 + 0.405473
NA PSHAa0128 carbohydrate phosphatase; putative CysQ protein duplicatechromosome I CDS136585 786 + 0.427481
NA PSHAa2881 putative integral inner membrane permeasechromosome I CDS3052882 1233 - 0.412814
NA PSHAb0165 putative TonB-dependent receptor; outer membranechromosome II CDS204463 2928 + 0.442281
NA PSHAa1006 putative NADH dehydrogenasechromosome I CDS1045760 1518 + 0.399868
NA PSHAa2565 putative Iron-compound ABC transporter, permease proteinchromosome I CDS2711373 1002 - 0.444112
NA PSHAa2451 conserved protein of unknown functionchromosome I CDS2598291 363 + 0.421488
NA PSHAa1007 putative potassium efflux system protein PhaEchromosome I CDS1047277 537 + 0.374302
NA PSHAa0674 conserved protein of unknown function ; putative membrane proteinchromosome I CDS701760 1173 + 0.421995
NA PSHAa1248 putative transport proteinchromosome I CDS1302588 1143 + 0.371829
NA PSHAb0254 putative Outer membrane TonB-dependent receptorchromosome II CDS299838 2418 - 0.409843
NA PSHAa1737 putative catalasechromosome I CDS1818619 1521 + 0.424063
NA PSHAa1004 putative NADH dehydrogenasechromosome I CDS1042624 2793 + 0.41962
NA PSHAa1611 putative orphan proteinchromosome I CDS1674070 813 + 0.407134
NA PSHAa1257 putative Na+/H+ antiporterchromosome I CDS1313505 1251 + 0.398082
NA PSHAa0313 conserved protein of unknown functionchromosome I CDS327389 678 + 0.384956
NA PSHAa0476 putative TonB-dependent receptorchromosome I CDS493796 2100 - 0.427619
NA PSHAa2660 conserved protein of unknown functionchromosome I CDS2814021 900 - 0.416667
NA PSHAa2409 putative permeasechromosome I CDS2558879 1194 + 0.436348
NA PSHAb0113 putative TonB-dependent receptor for Fechromosome II CDS136862 2544 + 0.423742
NA PSHAa0437 putative tonB-dependent receptorchromosome I CDS453923 2709 + 0.402362
NA PSHAa0720 putative orphan protein ; putative membrane proteinchromosome I CDS754405 477 + 0.429769
NA PSHAa0856 putative glutathione-regulated potassium-efflux system protein ( K(+)/H(+) antiporter)chromosome I CDS883825 1626 - 0.378229
NA PSHAa0428 putative TonB-dependent receptorchromosome I CDS445425 2712 + 0.402655
NA PSHAa1356 putative sugar transporterchromosome I CDS1414521 1494 + 0.420348
NA PSHAa1997 putative orphan protein ; putative membrane proteinchromosome I CDS2108533 276 + 0.387681
NA PSHAb0008 Putative copper export proteinchromosome II CDS11961 903 - 0.385382
NA PSHAa1699 putative oxidoreductase proteinchromosome I CDS1776666 1377 - 0.389252
NA PSHAa2136 putative transporterchromosome I CDS2260062 1401 + 0.433262
NA PSHAa0367 conserved protein of unknown function ; putative rhodanese sulfur transferase domainchromosome I CDS384581 432 + 0.428241
NA PSHAa2703 conserved protein of unknown functionchromosome I CDS2860661 2721 - 0.402058
NA PSHAa2179 putative orphan proteinchromosome I CDS2314927 300 - 0.416667
NA PSHAa1332 putative enzyme with thioredoxin-like domainchromosome I CDS1383778 345 - 0.373913
NA PSHAa1700 Na+/H+ antiporterchromosome I CDS1778395 1437 - 0.416841
NA PSHAb0232 putative TonB dependent receptorchromosome II CDS272567 2361 - 0.434985
ampG PSHAa2248 putative muropeptide transport protein (mFS family), highly conserved in gamma-proteobacteriachromosome I CDS2386172 1380 + 0.413043
apaG PSHAa2636 conserved protein (part of complex ksgA operon)chromosome I CDS2789277 390 + 0.410256
bcr PSHAa1223 putative efflux pumpchromosome I CDS1269963 1203 - 0.374065
bfr PSHAb0283 bacterioferritin (Cytochrome B-1) (Cytochrome B-557)chromosome II CDS329857 465 - 0.348387
bfr PSHAb0284 bacterioferritin (Cytochrome B-1) (Cytochrome B-557)chromosome II CDS330336 471 - 0.358811
chlD PSHAa2778 putative anion transport protein (ABC superfamily, ATP-binding protein)chromosome I CDS2955074 1410 - 0.398582
copAB PSHAa1011 P-type ATPase, copper transporting, phophatase-like domainchromosome I CDS1049034 2247 + 0.433022
copB PSHAb0010 Copper resistance protein B [Precursor] (CPx-type copper ATPase)chromosome II CDS13302 876 - 0.429224
corC PSHAa1043 magnesium and cobalt efflux protein corCchromosome I CDS1081547 885 - 0.451977
cusA PSHAa0305 cation efflux system protein cusAchromosome I CDS316904 3117 + 0.432788
cutA PSHAa0262 periplasmic divalent cation tolerance protein (C-type cytochrome biogenesis protein)chromosome I CDS275506 321 + 0.364486
cvrA PSHAb0106 putative Cell volume regulation protein Achromosome II CDS125020 1728 - 0.434606
cyaY PSHAa0095 putative CyaY, involved in iron scavenging and/or transfer to hemechromosome I CDS97340 324 + 0.382716
cysC PSHAa0209 adenosine 5'-phosphosulfate kinasechromosome I CDS216452 594 - 0.430976
cysI PSHAa0155 sulfite reductase, beta subunit, NADPH-dependent hemoproteinchromosome I CDS163494 1698 + 0.414605
cysJ PSHAa0154 sulfite reductase, alpha subunit (flavoprotein)chromosome I CDS161631 1815 + 0.430303
cysN PSHAa0211 ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase)chromosome I CDS218836 1425 - 0.421053
cysQ PSHAa0208 likely to be PAP (3',5' adenosine diphosphate) 3' phosphatasechromosome I CDS215671 708 - 0.450565
czcA PSHAa0579 Cobalt-zinc-cadmium resistance protein czcA (Cation efflux system protein czcA)chromosome I CDS598495 3138 + 0.444551
dps PSHAa2456 stress response DNA-binding protein Dpschromosome I CDS2604581 516 + 0.428295
dpsB PSHAa2954 DNA-binding DPS proteinchromosome I CDS3132931 474 + 0.367089
fbpA PSHAa2663 Iron(III) ABC transporter, periplasmic iron(III)-binding proteinchromosome I CDS2817653 1005 - 0.38806
fbpB PSHAa2662 Iron(III) ABC transporter, permease proteinchromosome I CDS2816021 1632 - 0.425245
fhuC PSHAa2566 putative Iron-compound ABC transporter, ATP-binding proteinchromosome I CDS2712376 813 - 0.405904
fur PSHAa1641 Ferric uptake regulation proteinchromosome I CDS1707957 444 + 0.34009
glpE PSHAa2314 thiosulfate sulfurtransferasechromosome I CDS2454760 318 - 0.408805
gppA PSHAa0115 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (Guanosine pentaphosphate phosphohydrolase) (pppGpp-5'-phosphohydrolase)chromosome I CDS122098 1428 + 0.403361
hmuR PSHAb0072 putative Hemin receptor protein HmuRchromosome II CDS83541 2088 + 0.396552
hmuS PSHAb0073 putative hemin transport protein hmuSchromosome II CDS85674 1053 + 0.380817
hmuT PSHAb0068 putative Hemin-binding periplasmic ABC-transport system proteinchromosome II CDS80685 918 - 0.396514
hmuU PSHAb0067 Hemin ABC-transport system permeasechromosome II CDS79624 1056 - 0.405303
hmuV PSHAb0066 putative Hemin ABC transport system ATP-binding protein hmuVchromosome II CDS78838 786 - 0.417303
irgA PSHAb0251 Iron-regulated outer membrane virulence protein homologchromosome II CDS294804 1980 + 0.416162
katB PSHAb0205 catalasechromosome II CDS240676 1536 - 0.406901
lmrb PSHAa0650 Lincomycin resistance protein lmrBchromosome I CDS673820 1431 - 0.385045
mdoG PSHAa2937 periplasmic glucans biosynthesis proteinchromosome I CDS3110514 1608 + 0.411692
mdtI PSHAa2462 putative multidrug transport protein (SmR superfamily)chromosome I CDS2613066 327 + 0.41896
mdtJ PSHAa2461 putative multidrug transport protein (SmR superfamily)chromosome I CDS2612731 339 + 0.374631
nor PSHAa2417 Nitric oxide reductasechromosome I CDS2566471 2259 - 0.422753
phoD PSHAa1860 putative alkaline phosphatase D (APaseD)chromosome I CDS1960875 1044 - 0.424329
phoU PSHAa0312 transcriptional repressor for high-affinity phosphate uptakechromosome I CDS326539 702 + 0.377493
pstA PSHAa0310 putative phosphate transport system permease proteinchromosome I CDS323997 1650 + 0.423636
pstB PSHAa0311 Phosphate import ATP-binding protein pstB(Phosphate-transporting ATPase)(ABC phosphate transporter)chromosome I CDS325669 828 + 0.414251
qacF PSHAa2214 Quaternary ammonium compound-resistance protein (Quarternary ammonium determinant F)chromosome I CDS2352580 327 - 0.41896
sapB PSHAa2052 peptide transport protein (ABC superfamily, membrane)chromosome I CDS2169150 1035 + 0.384541
snaA PSHAa0210 putative sodium/sulfate symporterchromosome I CDS217080 1725 - 0.421449
sodB PSHAa1215 iron superoxide dismutasechromosome I CDS1262989 582 - 0.410653
sseA PSHAa0459 putative 3-mercaptopyruvate sulfurtransferasechromosome I CDS478765 831 + 0.423586
thiI PSHAa2280 thiamine biosynthesis proteinchromosome I CDS2424509 1458 - 0.404664
trkA PSHAa0020 Trk system; major constitutive K+ transport system; potassium transport inner membrane protein subunit; six transmembrane channelchromosome I CDS22631 1377 - 0.432099
trkH PSHAa0015 potassium transport protein, requires TrkE (Trk family)chromosome I CDS19070 1452 + 0.430441
zur PSHAa0493 Zinc uptake regulation proteinchromosome I CDS508433 438 - 0.406393