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2024-05-03 01:10:33

Gene list

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COG category: Inorganic ion transport and metabolism
Organism: Rhodoferax ferrireducens DSM 15236, DSM 15236

Number of genes found: 204

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Rhodoferax ferrireducens DSM 15236, DSM 15236
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Rfer_0984 binding-protein-dependent transport systems inner membrane componentchromosome CDS1033173 942 - 0.64862
NA Rfer_1884 NnrSchromosome CDS2020394 1206 + 0.630182
NA Rfer_2554 twin-arginine translocation pathway signalchromosome CDS2812229 1245 + 0.615261
NA Rfer_0434 major facilitator superfamily MFS_1chromosome CDS439184 1326 - 0.65083
NA Rfer_2460 Sulfate adenylyltransferase, large subunitchromosome CDS2708018 1413 + 0.641897
NA Rfer_2860 Molybdate ABC transporter, ATP-binding proteinchromosome CDS3158784 1110 + 0.646847
NA Rfer_0183 Phosphonate uptake transporterchromosome CDS181202 804 - 0.599503
NA Rfer_0024 Heavy metal translocating P-type ATPasechromosome CDS25444 2274 + 0.679859
NA Rfer_0418 Heavy metal translocating P-type ATPasechromosome CDS426224 2451 - 0.642187
NA Rfer_1953 binding-protein-dependent transport systems inner membrane componentchromosome CDS2097181 1005 - 0.58607
NA Rfer_0467 major facilitator superfamily MFS_1chromosome CDS478488 1212 - 0.671617
NA Rfer_0764 K+ potassium transporterchromosome CDS799574 1869 + 0.582129
NA Rfer_1894 major facilitator superfamily MFS_1chromosome CDS2033035 1188 - 0.616162
NA Rfer_1761 Sulfate ABC transporter, permease protein CysTchromosome CDS1893805 882 - 0.613379
NA Rfer_2880 3-mercaptopyruvate sulfurtransferasechromosome CDS3182365 870 + 0.657471
NA Rfer_2017 Polyphosphate kinasechromosome CDS2175334 2103 + 0.584403
NA Rfer_1220 Drug resistance transporter Bcr/CflA subfamilychromosome CDS1306461 1239 + 0.615012
NA Rfer_1399 phosphate transporterchromosome CDS1510866 1011 + 0.556874
NA Rfer_0753 ferric uptake regulator, FUR familychromosome CDS788358 447 - 0.590604
NA Rfer_1949 extracellular solute-binding protein, family 5chromosome CDS2092623 1629 - 0.587477
NA Rfer_0932 binding-protein-dependent transport systems inner membrane componentchromosome CDS981479 840 - 0.610714
NA Rfer_0580 Phosphate transport system permease protein 1chromosome CDS601488 780 - 0.55641
NA Rfer_0358 major facilitator superfamily MFS_1chromosome CDS359352 1233 + 0.616383
NA Rfer_3151 Superoxide dismutasechromosome CDS3488338 582 - 0.565292
NA Rfer_4191 major facilitator superfamily MFS_1chromosome CDS4660796 1146 + 0.625654
NA Rfer_2870 transcriptional regulator of molybdate metabolism, LysR familychromosome CDS3169935 1119 + 0.629133
NA Rfer_2623 periplasmic binding proteinchromosome CDS2885717 879 - 0.59727
NA Rfer_3631 Rhodanese-likechromosome CDS4047383 1062 - 0.583804
NA Rfer_1665 ATPase, E1-E2 typechromosome CDS1795240 2670 - 0.659176
NA Rfer_1776 binding-protein-dependent transport systems inner membrane componentchromosome CDS1911185 885 - 0.644068
NA Rfer_0983 binding-protein-dependent transport systems inner membrane componentchromosome CDS1032325 852 - 0.664319
NA Rfer_2447 Chromate transporterchromosome CDS2694448 1194 + 0.577052
NA Rfer_0473 ammonium transporterchromosome CDS487723 1569 + 0.643722
NA Rfer_1778 ABC transporter, substrate-binding protein, aliphatic sulphonateschromosome CDS1913273 1032 - 0.630814
NA Rfer_3740 ABC transporter relatedchromosome CDS4172248 864 - 0.613426
NA Rfer_1756 major facilitator superfamily MFS_1chromosome CDS1889588 1224 + 0.669935
NA Rfer_1781 Thiosulphate-binding proteinchromosome CDS1916043 1035 - 0.600966
NA Rfer_3086 phosphonate-binding periplasmic proteinchromosome CDS3422553 864 + 0.570602
NA Rfer_2143 putative Na+/H+ antiporterchromosome CDS2324452 1284 + 0.577103
NA Rfer_1759 Sulphate transport system permease protein 1chromosome CDS1891456 1104 - 0.617754
NA Rfer_2785 periplasmic glucan biosynthesis protein, MdoGchromosome CDS3073396 1569 - 0.625876
NA Rfer_1779 ABC transporter, substrate-binding protein, aliphatic sulphonateschromosome CDS1914325 963 - 0.606438
NA Rfer_1164 conserved hypothetical proteinchromosome CDS1248289 315 + 0.590476
NA Rfer_3095 phosphonate-binding periplasmic proteinchromosome CDS3433060 855 + 0.575439
NA Rfer_1951 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-likechromosome CDS2095272 969 - 0.621259
NA Rfer_2687 conserved hypothetical proteinchromosome CDS2958621 396 + 0.628788
NA Rfer_0972 major facilitator superfamily MFS_1chromosome CDS1021985 1227 + 0.603912
NA Rfer_3103 extracellular solute-binding protein, family 5chromosome CDS3442293 1560 + 0.557692
NA Rfer_2757 Chromate transporterchromosome CDS3045233 609 + 0.635468
NA Rfer_0930 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-likechromosome CDS979439 969 - 0.648091
NA Rfer_1886 putative nitric oxide reductase (subunit B) transmembrane proteinchromosome CDS2022567 2325 + 0.59914
NA Rfer_3739 cyanate lyasechromosome CDS4171754 444 - 0.547297
NA Rfer_0493 Magnesium-translocating P-type ATPasechromosome CDS510849 2487 - 0.632891
NA Rfer_1698 major facilitator superfamily MFS_1chromosome CDS1826942 1284 + 0.614486
NA Rfer_0619 TonB-dependent receptorchromosome CDS641683 2304 + 0.607205
NA Rfer_2412 anion transporterchromosome CDS2654069 1446 - 0.574689
NA Rfer_3396 TonB-dependent receptorchromosome CDS3778264 2646 - 0.617536
NA Rfer_1398 protein of unknown function DUF47chromosome CDS1510206 648 + 0.540123
NA Rfer_0907 Drug resistance transporter EmrB/QacA subfamilychromosome CDS949579 1491 - 0.551308
NA Rfer_2917 Frataxin-likechromosome CDS3227092 330 + 0.527273
NA Rfer_3118 ABC transporter, substrate-binding proteinchromosome CDS3456731 1011 - 0.56182
NA Rfer_1615 Phosphonate-binding periplasmic proteinchromosome CDS1747730 864 + 0.587963
NA Rfer_0487 major facilitator superfamily MFS_1chromosome CDS503163 1284 - 0.606698
NA Rfer_2756 Chromate transporterchromosome CDS3044637 600 + 0.601667
NA Rfer_2621 periplasmic binding proteinchromosome CDS2884192 900 - 0.617778
NA Rfer_2746 binding-protein-dependent transport systems inner membrane componentchromosome CDS3032205 852 - 0.577465
NA Rfer_3748 magnesium and cobalt transport protein CorAchromosome CDS4179990 987 + 0.564336
NA Rfer_1760 Sulfate ABC transporter, permease protein CysWchromosome CDS1892942 867 - 0.623991
NA Rfer_3644 cation diffusion facilitator family transporterchromosome CDS4059570 909 + 0.649065
NA Rfer_3567 2-keto-3-deoxygluconate permeasechromosome CDS3965937 975 - 0.578462
NA Rfer_0923 anion transporterchromosome CDS971155 1470 + 0.621088
NA Rfer_0981 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-likechromosome CDS1030341 987 - 0.661601
NA Rfer_2443 major facilitator superfamily MFS_1chromosome CDS2689645 1446 + 0.571923
NA Rfer_1115 TonB-dependent receptorchromosome CDS1198050 2832 - 0.570975
NA Rfer_2448 Rhodanese-likechromosome CDS2695657 372 + 0.569892
NA Rfer_2869 binding-protein-dependent transport systems inner membrane componentchromosome CDS3169102 783 - 0.628352
NA Rfer_4151 NnrSchromosome CDS4621643 1185 + 0.603376
NA Rfer_0960 major facilitator superfamily MFS_1chromosome CDS1010162 1146 + 0.569808
NA Rfer_1460 Twin-arginine translocation pathway signalchromosome CDS1569983 1047 + 0.578797
NA Rfer_0463 DsrE-like proteinchromosome CDS473622 354 + 0.607345
NA Rfer_2036 TonB-dependent receptorchromosome CDS2198775 2064 + 0.600775
NA Rfer_3758 conserved hypothetical proteinchromosome CDS4190882 225 - 0.528889
NA Rfer_3115 ABC transporter relatedchromosome CDS3453172 819 - 0.586081
NA Rfer_3841 Carbonate dehydratasechromosome CDS4288780 672 - 0.616071
NA Rfer_1218 natural resistance-associated macrophage proteinchromosome CDS1304636 1269 + 0.64145
NA Rfer_0496 cation diffusion facilitator family transporterchromosome CDS514998 957 + 0.654127
NA Rfer_2859 Molybdate ABC transporter, permease proteinchromosome CDS3158074 714 + 0.610644
NA Rfer_2053 ABC transporter relatedchromosome CDS2221470 813 - 0.648216
NA Rfer_0222 oxidoreductase FAD/NAD(P)-bindingchromosome CDS221364 1272 + 0.621069
NA Rfer_1927 Heavy metal translocating P-type ATPasechromosome CDS2069182 2388 + 0.640703
NA Rfer_2456 nitrite and sulphite reductase 4Fe-4S proteinchromosome CDS2704032 1818 + 0.640264
NA Rfer_2824 Chromate transporterchromosome CDS3125129 1254 + 0.637959
NA Rfer_2052 ABC-3chromosome CDS2220574 900 - 0.662222
NA Rfer_0931 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-likechromosome CDS980404 1065 - 0.63662
NA Rfer_2556 nitrate transport ATP-binding subunits C and Dchromosome CDS2814457 825 + 0.646061
NA Rfer_0462 transcriptional regulator, ArsR familychromosome CDS472859 762 + 0.611549
NA Rfer_4238 sodium/hydrogen exchangerchromosome CDS4704535 1971 + 0.578894
NA Rfer_0583 Periplasmic phosphate binding proteinchromosome CDS604235 1044 - 0.571839
NA Rfer_0933 binding-protein-dependent transport systems inner membrane componentchromosome CDS982323 942 - 0.609342
NA Rfer_1310 Rhodanese-likechromosome CDS1403174 408 + 0.602941
NA Rfer_1397 sodium/hydrogen exchangerchromosome CDS1508796 1329 + 0.582393
NA Rfer_2555 nitrate transport permeasechromosome CDS2813516 945 + 0.608466
NA Rfer_2793 nitrate reductase, beta subunitchromosome CDS3087582 1524 + 0.580052
NA Rfer_0856 major facilitator superfamily MFS_1chromosome CDS893032 1194 - 0.608878
NA Rfer_0582 Phosphate ABC transporter, permease protein PstCchromosome CDS603161 1032 - 0.585271
NA Rfer_2032 Ppx/GppA phosphatasechromosome CDS2193168 1518 - 0.616601
NA Rfer_0141 Phosphonate C-P lyase system, PhnKchromosome CDS144065 885 - 0.674576
NA Rfer_2513 major facilitator superfamily MFS_1chromosome CDS2775357 1182 + 0.642132
NA Rfer_3943 Integral membrane protein TerCchromosome CDS4410561 699 - 0.592275
NA Rfer_2790 major facilitator superfamily MFS_1chromosome CDS3080731 1257 + 0.581543
NA Rfer_3116 ABC transporter, substrate-binding proteinchromosome CDS3454004 1011 - 0.551929
NA Rfer_0411 Heavy metal efflux pump CzcAchromosome CDS417922 3132 - 0.6159
NA Rfer_0934 Twin-arginine translocation pathway signalchromosome CDS983398 1614 - 0.593556
NA Rfer_1430 Na/Pi cotransporter II-relatedchromosome CDS1540308 1647 - 0.612629
NA Rfer_2130 binding-protein-dependent transport systems inner membrane componentchromosome CDS2308658 1140 + 0.611404
NA Rfer_0956 Carbohydrate kinase, thermoresistant glucokinasechromosome CDS1005430 570 - 0.580702
NA Rfer_1617 Phosphonate uptake transporterchromosome CDS1749518 855 + 0.649123
NA Rfer_2747 ABC transporter relatedchromosome CDS3033059 810 - 0.582716
NA Rfer_2619 ABC transporter relatedchromosome CDS2882358 765 - 0.654902
NA Rfer_0186 major facilitator superfamily MFS_1chromosome CDS183947 1272 + 0.643082
NA Rfer_4176 major facilitator superfamily MFS_1chromosome CDS4645914 1278 + 0.606416
NA Rfer_1950 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-likechromosome CDS2094271 1005 - 0.636816
NA Rfer_1762 Thiosulphate-binding proteinchromosome CDS1894748 999 - 0.567568
NA Rfer_2129 binding-protein-dependent transport systems inner membrane componentchromosome CDS2307640 1035 + 0.574879
NA Rfer_3104 binding-protein-dependent transport systems inner membrane componentchromosome CDS3443938 921 + 0.581976
NA Rfer_2539 K+ potassium transporterchromosome CDS2797467 1878 - 0.607561
NA Rfer_3289 NADH dehydrogenase (quinone)chromosome CDS3651835 1455 - 0.594502
NA Rfer_3663 Bile acid:sodium symporterchromosome CDS4083712 1068 - 0.598315
NA Rfer_3773 major facilitator superfamily MFS_1chromosome CDS4212653 1251 - 0.632294
NA Rfer_2748 extracellular solute-binding protein, family 3chromosome CDS3033865 1023 - 0.565982
NA Rfer_0519 Rh-like protein/ammonium transporterchromosome CDS542970 1203 - 0.620948
NA Rfer_1723 Rieske (2Fe-2S) proteinchromosome CDS1862054 366 + 0.543716
NA Rfer_0280 Rieske (2Fe-2S) proteinchromosome CDS284179 1056 + 0.614583
NA Rfer_3306 iron permease FTR1chromosome CDS3669641 822 - 0.652068
NA Rfer_0492 ATPase, E1-E2 typechromosome CDS508306 2574 - 0.660839
NA Rfer_3806 Mg2+ transporter protein, CorA-likechromosome CDS4246272 1239 + 0.644875
NA Rfer_1952 binding-protein-dependent transport systems inner membrane componentchromosome CDS2096264 909 - 0.618262
NA Rfer_1133 sodium/calcium exchanger membrane proteinchromosome CDS1217396 1005 + 0.574129
NA Rfer_1023 major facilitator superfamily MFS_1chromosome CDS1081289 1227 + 0.603097
NA Rfer_0581 Phosphate transport system permease protein 2chromosome CDS602280 885 - 0.613559
NA Rfer_1936 conserved hypothetical proteinchromosome CDS2078899 291 + 0.556701
NA Rfer_2603 Rhodanese-likechromosome CDS2867993 342 + 0.631579
NA Rfer_3747 alkylphosphonate utilization operon protein PhnAchromosome CDS4179331 357 - 0.577031
NA Rfer_0377 putative membrane anion transport proteinchromosome CDS384176 1266 + 0.661927
NA Rfer_2167 major facilitator superfamily MFS_1chromosome CDS2362300 1212 + 0.633663
NA Rfer_0340 putative ABC transporter, periplasmic molybdate binding proteinchromosome CDS339778 711 - 0.673699
NA Rfer_3124 Cytochrome-c peroxidasechromosome CDS3464014 996 - 0.601406
NA Rfer_3742 Twin-arginine translocation pathway signalchromosome CDS4173969 1404 - 0.603989
NA Rfer_3105 binding-protein-dependent transport systems inner membrane componentchromosome CDS3444866 924 + 0.591991
NA Rfer_2128 extracellular solute-binding protein, family 5chromosome CDS2305825 1812 + 0.595475
NA Rfer_0579 phosphate uptake regulator, PhoUchromosome CDS600777 702 - 0.591168
NA Rfer_1536 Drug resistance transporter Bcr/CflA subfamilychromosome CDS1652901 1227 - 0.653627
NA Rfer_1504 proton-translocating NADH-quinone oxidoreductase, chain Lchromosome CDS1616144 2016 + 0.519345
NA Rfer_4044 Integral membrane protein TerCchromosome CDS4509440 720 - 0.65
NA Rfer_2620 transport system permease proteinchromosome CDS2883119 1077 - 0.684308
NA Rfer_1441 pyridoxamine 5'-phosphate oxidase-related, FMN-bindingchromosome CDS1554718 489 + 0.576687
NA Rfer_1618 Phosphonate uptake transporterchromosome CDS1750383 825 + 0.636364
NA Rfer_1143 Heavy metal transport/detoxification proteinchromosome CDS1226642 384 + 0.604167
NA Rfer_0985 extracellular solute-binding protein, family 5chromosome CDS1034175 1536 - 0.613932
NA Rfer_0064 ferrous iron transport protein Bchromosome CDS66445 1887 + 0.653948
NA Rfer_3836 Rhodanese-likechromosome CDS4281780 423 - 0.628842
NA Rfer_1516 Drug resistance transporter EmrB/QacA subfamilychromosome CDS1633008 1584 + 0.611742
NA Rfer_0185 Phosphonate ABC transporter PhnC, ATP-bindingchromosome CDS183015 882 - 0.672336
NA Rfer_0531 ApaGchromosome CDS556888 393 - 0.600509
NA Rfer_3613 Rhodanese-likechromosome CDS4028646 483 + 0.6853
NA Rfer_2625 TonB-dependent receptorchromosome CDS2887993 1974 - 0.571935
NA Rfer_3292 NADH dehydrogenase (quinone)chromosome CDS3654895 2025 - 0.605926
NA Rfer_1775 ABC transporter relatedchromosome CDS1910288 837 - 0.660693
NA Rfer_1595 ABC transporter relatedchromosome CDS1730406 1086 + 0.623389
NA Rfer_0063 FeoAchromosome CDS66180 258 + 0.635659
NA Rfer_2582 Na+/H+ antiporter NhaAchromosome CDS2843972 1182 - 0.592217
NA Rfer_1451 Hemerythrin-like, metal-bindingchromosome CDS1561656 834 - 0.514389
NA Rfer_3279 NADH/Ubiquinone/plastoquinone (complex I)chromosome CDS3640227 1443 + 0.610534
NA Rfer_3276 NADH dehydrogenase (quinone)chromosome CDS3636687 2016 + 0.615079
NA Rfer_0729 cation diffusion facilitator family transporterchromosome CDS769192 915 + 0.63388
NA Rfer_2791 nitrate/nitrite antiporterchromosome CDS3082012 1629 + 0.611418
NA Rfer_0982 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-likechromosome CDS1031324 1005 - 0.677612
NA Rfer_4134 putative lipoproteinchromosome CDS4608059 1278 + 0.628326
NA Rfer_4140 C4-dicarboxylate transporter/malic acid transport proteinchromosome CDS4612877 1125 - 0.591111
NA Rfer_1144 Heavy metal translocating P-type ATPasechromosome CDS1227119 2556 + 0.622848
NA Rfer_1098 sodium/hydrogen exchangerchromosome CDS1176129 1260 + 0.604762
NA Rfer_2099 major facilitator superfamily MFS_1chromosome CDS2272672 1221 - 0.573301
NA Rfer_1465 anion transporterchromosome CDS1574637 1473 - 0.589274
NA Rfer_3741 nitrate transport permeasechromosome CDS4173101 867 - 0.598616
NA Rfer_1326 Alkaline phosphatasechromosome CDS1423867 1617 + 0.660482
NA Rfer_3080 sodium/calcium exchanger membrane proteinchromosome CDS3412993 1005 + 0.58408
NA Rfer_0015 anion transporterchromosome CDS16906 1428 + 0.581232
NA Rfer_1946 major facilitator superfamily MFS_1chromosome CDS2089331 1263 + 0.61441
NA Rfer_1616 ABC transporter relatedchromosome CDS1748669 834 + 0.664269
NA Rfer_3659 major facilitator superfamily MFS_1chromosome CDS4077067 1221 + 0.599509
NA Rfer_2878 Rieske (2Fe-2S) proteinchromosome CDS3180207 1158 + 0.622625
NA Rfer_0854 Heavy metal translocating P-type ATPasechromosome CDS890186 2439 + 0.619106
NA Rfer_0314 major facilitator superfamily MFS_1chromosome CDS313865 1212 + 0.544554
NA Rfer_3114 binding-protein-dependent transport systems inner membrane componentchromosome CDS3452278 885 - 0.564972
NA Rfer_0516 major facilitator superfamily MFS_1chromosome CDS538923 1326 - 0.61463
NA Rfer_2051 periplasmic solute binding proteinchromosome CDS2219636 912 - 0.575658
NA Rfer_1155 Cl-channel, voltage gatedchromosome CDS1240547 1323 - 0.571429
NA Rfer_0184 Phosphonate-binding periplasmic proteinchromosome CDS182005 969 - 0.569659
NA Rfer_2558 Nitrite reductase (NAD(P)H) large subunit, NirDchromosome CDS2817932 348 + 0.591954
NA Rfer_2858 molybdenum ABC transporter, periplasmic molybdate-binding proteinchromosome CDS3157322 756 + 0.612434
NA Rfer_3913 Rhodanese-likechromosome CDS4371274 399 + 0.666667
NA Rfer_3200 periplasmic copper-bindingchromosome CDS3542942 1299 + 0.597383
NA Rfer_1206 major facilitator superfamily MFS_1chromosome CDS1292342 1227 + 0.597392
NA Rfer_2542 Potassium efflux system proteinchromosome CDS2801774 1887 + 0.614732