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2024-05-06 04:31:44

Gene list

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COG category: Inorganic ion transport and metabolism
Organism: Xanthomonas oryzae pv. oryzae KACC10331, KACC10331

Number of genes found: 233

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Xanthomonas oryzae pv. oryzae KACC10331, KACC10331
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XOO0626 ferrichrome-iron receptor 3chromosome CDS648960 2142 + 0.641923
NA XOO1724 DNA-binding related proteinchromosome CDS1786095 594 - 0.62963
NA XOO2166 conserved hypothetical proteinchromosome CDS2272370 2232 + 0.627688
NA XOO2061 conserved hypothetical proteinchromosome CDS2163358 987 - 0.644377
NA XOO1898 conserved hypothetical proteinchromosome CDS2000928 510 + 0.615686
NA XOO1233 Oar proteinchromosome CDS1256977 3261 + 0.625882
NA XOO3069 conserved hypothetical proteinchromosome CDS3300668 153 + 0.640523
NA XOO1505 transcriptional regulator fur familychromosome CDS1538672 534 + 0.661049
NA XOO2709 phosphate-binding proteinchromosome CDS2869141 930 - 0.653763
NA XOO3375 conserved hypothetical proteinchromosome CDS3598363 525 - 0.634286
NA XOO2197 NADH dehydrogenasechromosome CDS2309286 1572 - 0.687023
NA XOO2980 MFS transporterchromosome CDS3186520 1416 + 0.639124
NA XOO2704 conserved hypothetical proteinchromosome CDS2864116 990 - 0.665657
NA XOO2539 conserved hypothetical proteinchromosome CDS2683107 1332 + 0.638138
NA XOO4150 bacterioferritin-associated ferredoxinchromosome CDS4429509 270 - 0.607407
NA XOO3070 conserved hypothetical proteinchromosome CDS3300847 261 + 0.651341
NA XOO0533 MFS transporterchromosome CDS555588 246 + 0.715447
NA XOO1805 conserved hypothetical proteinchromosome CDS1899143 2910 - 0.58488
NA XOO2829 TonB-dependent siderophore receptor, putativechromosome CDS3027668 393 + 0.653944
NA XOO1988 conserved hypothetical proteinchromosome CDS2090476 357 + 0.605042
NA XOO4196 conserved hypothetical proteinchromosome CDS4472108 435 + 0.636782
NA XOO4385 conserved hypothetical proteinchromosome CDS4658805 315 - 0.68254
NA XOO0907 bacterioferritinchromosome CDS937210 561 - 0.59893
NA XOO1248 potassium channel related proteinchromosome CDS1277029 1083 + 0.671283
NA XOO0890 conserved hypothetical proteinchromosome CDS914984 390 + 0.594872
NA XOO4285 conserved hypothetical proteinchromosome CDS4560897 1599 - 0.636648
NA XOO4490 conserved hypothetical proteinchromosome CDS4787386 807 + 0.701363
NA XOO3107 conserved hypothetical proteinchromosome CDS3332383 360 + 0.586111
NA XOO3031 cytochrome C peroxidasechromosome CDS3253852 993 + 0.64854
NA XOO3768 ABC transporter substrate binding proteinchromosome CDS4020657 741 + 0.631579
NA XOO0534 MFS transporterchromosome CDS555836 942 + 0.66242
NA XOO3775 conserved hypothetical proteinchromosome CDS4024206 648 - 0.640432
NA XOO3632 conserved hypothetical proteinchromosome CDS3891703 351 + 0.720798
NA XOO0250 OmpA-related proteinchromosome CDS266041 3039 - 0.633103
NA XOO2596 ring hydroxylating dioxygenase alpha-subunitchromosome CDS2746112 1146 + 0.56719
NA XOO1113 conserved hypothetical proteinchromosome CDS1137113 780 - 0.64359
NA XOO3781 conserved hypothetical proteinchromosome CDS4027339 246 - 0.605691
NA XOO3861 TonB-dependent receptor, putativechromosome CDS4120320 2583 - 0.626791
NA XOO1959 Outer membrane receptor proteins, mostly Fe transportchromosome CDS2055500 2181 - 0.650619
NA XOO4396 probable TonB-dependent receptorchromosome CDS4670287 2889 + 0.609553
NA XOO2866 conserved hypothetical proteinchromosome CDS3077063 285 - 0.638596
NA XOO4069 conserved hypothetical proteinchromosome CDS4353760 354 + 0.581921
NA XOO4205 MFS transporterchromosome CDS4481787 1224 + 0.673203
NA XOO4286 conserved hypothetical proteinchromosome CDS4562619 975 - 0.63282
NA XOO0715 outer membrane proteinchromosome CDS734086 801 + 0.619226
NA XOO2975 conserved hypothetical proteinchromosome CDS3181230 651 - 0.608295
NA XOO4554 conserved hypothetical proteinchromosome CDS4852124 1572 - 0.659669
NA XOO1090 glutaredoxin-like proteinchromosome CDS1110572 927 - 0.662352
NA XOO2827 Outer membrane receptor proteins, mostly Fe transportchromosome CDS3024417 1968 + 0.65498
NA XOO0291 conserved hypothetical proteinchromosome CDS301111 687 + 0.694323
NA XOO3769 ABC transporter substrate binding proteinchromosome CDS4021428 321 + 0.607477
NA XOO4327 hypothetical proteinchromosome CDS4606762 594 + 0.632997
abc XOO0713 ABC transporter ATP-binding proteinchromosome CDS732097 1203 + 0.665835
ampG XOO0510 signal transducerchromosome CDS526366 1296 + 0.632716
amtB XOO4486 ammonium transporterchromosome CDS4782740 1476 - 0.663279
apaG XOO3749 ApaG proteinchromosome CDS4004202 384 + 0.661458
arsC XOO1073 arsenate reductasechromosome CDS1097436 312 + 0.586538
arsC XOO1074 arsenate reductasechromosome CDS1097865 201 + 0.641791
bcr XOO3541 MFS transporterchromosome CDS3810620 513 - 0.653021
bcr XOO3542 MFS transporterchromosome CDS3810765 723 - 0.651452
bedB XOO1400 benzene 1,2-dioxygenase ferredoxin proteinchromosome CDS1434143 330 - 0.621212
bfeA XOO1366 ferric enterobactin receptorchromosome CDS1398454 2427 - 0.662546
bfeA XOO1604 ferric enterobactin receptorchromosome CDS1648663 2535 - 0.644576
bfeA XOO1363 ferric enterobactin receptorchromosome CDS1392157 2409 - 0.635118
bfeA XOO1364 ferric enterobactin receptorchromosome CDS1394889 2610 - 0.628736
bfr XOO4149 bacterioferritinchromosome CDS4428696 471 - 0.569002
bfrC XOO0861 iron receptorchromosome CDS882433 2202 - 0.650772
brf XOO1994 bacterioferritinchromosome CDS2101191 555 + 0.6
btuB XOO1839 TonB-dependent receptorchromosome CDS1938279 966 - 0.624224
btuB XOO1840 TonB-dependent receptorchromosome CDS1939180 777 - 0.671815
btuB XOO0950 TonB-dependent receptorchromosome CDS982515 2970 + 0.611448
btuB XOO3115 TonB-dependent receptorchromosome CDS3339567 381 - 0.574803
btuB XOO3114 TonB-dependent receptorchromosome CDS3339105 420 - 0.602381
btuB XOO3123 TonB-dependent receptorchromosome CDS3352095 2946 - 0.613035
btuB XOO3119 TonB-dependent receptorchromosome CDS3341798 1089 - 0.651056
btuB XOO3116 TonB-dependent receptorchromosome CDS3339986 507 - 0.589744
btuB XOO3113 TonB-dependent receptorchromosome CDS3338541 528 - 0.598485
catA XOO1897 cation transport proteinchromosome CDS1999938 933 - 0.629153
catB XOO0417 catalase precursorchromosome CDS424086 1524 + 0.614173
cirA XOO4431 TonB-dependent receptorchromosome CDS4724372 2970 + 0.633333
cirA XOO0170 TonB-dependent receptorchromosome CDS171846 1788 + 0.666667
cirA XOO1180 TonB-dependent receptorchromosome CDS1205856 2889 - 0.611976
cirA XOO2826 TonB-dependent receptorchromosome CDS3019781 2964 - 0.652159
cirA XOO0978 colicin I receptorchromosome CDS1010365 2124 + 0.62194
cirA XOO0171 TonB-dependent receptorchromosome CDS173158 1479 + 0.665314
cirA XOO3793 TonB-dependent receptorchromosome CDS4041679 2757 - 0.619151
cirA XOO2500 TonB-dependent receptorchromosome CDS2646506 2274 - 0.612137
cit1 XOO1114 citrate carrier proteinchromosome CDS1137889 1440 - 0.606944
copB XOO0755 copper resistance protein B precursorchromosome CDS768422 1107 - 0.627823
corA XOO4032 magnesium and cobalt transport proteinchromosome CDS4309144 912 - 0.630482
corA XOO2773 magnesium and cobalt transport proteinchromosome CDS2935421 1002 + 0.611776
cutA XOO0562 periplasmic divalent cation tolerance proteinchromosome CDS583115 555 - 0.654054
cutC XOO1761 copper homeostasis proteinchromosome CDS1837932 732 + 0.654372
cynT XOO2457 carbonic anhydrasechromosome CDS2610533 549 - 0.644809
cynX XOO2663 MFS transporterchromosome CDS2823630 1317 + 0.690964
cysA XOO3686 sulfate ABC transporter ATP-binding proteinchromosome CDS3949962 1041 - 0.664745
cysI XOO3400 NADPH-sulfite reductase iron-sulfur proteinchromosome CDS3624233 1722 + 0.647503
cysJ XOO3398 NADPH-sulfite reductase flavoprotein subunitchromosome CDS3622276 1254 + 0.69378
cysQ XOO1788 sulfite synthesis pathway proteinchromosome CDS1881827 1518 + 0.65415
cysW XOO3688 ABC transporter sulfate permeasechromosome CDS3951004 954 - 0.631027
czcD XOO1847 cobalt-zinc-cadmium resistance proteinchromosome CDS1947535 996 + 0.655622
czcD XOO0383 heavy metal transporterchromosome CDS386892 1002 - 0.657685
exuT XOO4430 hexuranate transporterchromosome CDS4722645 1260 - 0.642857
fecA XOO4629 TonB-dependent receptorchromosome CDS4931081 399 - 0.601504
fecA XOO4631 TonB-dependent receptorchromosome CDS4932508 357 - 0.644258
fecA XOO1260 TonB-dependent receptorchromosome CDS1286663 3186 + 0.620213
fecA XOO1359 citrate-dependent iron transporterchromosome CDS1384984 2142 - 0.631186
fecA XOO4632 TonB-dependent receptorchromosome CDS4932952 567 - 0.622575
fecA XOO3403 TonB-dependent receptorchromosome CDS3628404 2061 - 0.650655
fecA XOO3683 TonB-dependent receptorchromosome CDS3944871 2418 + 0.632341
fecA XOO0901 TonB-dependent receptorchromosome CDS929210 3012 + 0.603586
feoA XOO2900 ferrous iron transport proteinchromosome CDS3110580 291 - 0.635739
feoB XOO2899 ferrous iron transport protein Bchromosome CDS3108724 1866 - 0.665059
fepA XOO1727 TonB-dependent receptorchromosome CDS1792164 2715 - 0.60663
fhuA XOO3704 TonB-dependent receptorchromosome CDS3964974 141 + 0.687943
fhuA XOO1530 TonB-dependent receptorchromosome CDS1560860 2421 - 0.633209
fhuA XOO1019 TonB-dependent receptorchromosome CDS1039041 777 - 0.593308
fhuA XOO1992 iron receptorchromosome CDS2096007 2127 - 0.627174
fhuA XOO3703 TonB-dependent receptorchromosome CDS3964595 507 + 0.668639
fhuA XOO1221 TonB-dependent receptorchromosome CDS1246324 1353 + 0.631929
fhuE XOO1177 outer membrane receptor for ferric iron uptakechromosome CDS1203104 708 + 0.618644
fpvA XOO0271 ferripyoverdine receptorchromosome CDS283194 1014 + 0.638067
fpvA XOO0269 ferripyoverdine receptorchromosome CDS282445 756 + 0.646825
fur XOO2027 ferric uptake regulator Furchromosome CDS2125636 453 + 0.584989
fyuA XOO1099 TonB-dependent receptorchromosome CDS1120998 2307 - 0.636758
fyuA XOO3909 TonB-dependent receptorchromosome CDS4167070 1443 - 0.615385
fyuA XOO3907 TonB-dependent receptorchromosome CDS4165901 792 - 0.585859
fyuA XOO3908 TonB-dependent receptorchromosome CDS4166679 363 - 0.589532
fyuA XOO0897 TonB-dependent receptorchromosome CDS924153 2733 + 0.632272
fyuA XOO3906 TonB-dependent receptorchromosome CDS4165523 333 - 0.54955
iroN XOO0394 TonB-dependent receptorchromosome CDS398167 3075 - 0.636748
iroN XOO3924 TonB-dependent receptorchromosome CDS4189778 2517 - 0.609058
iroN XOO1784 TonB-dependent receptorchromosome CDS1875083 2712 - 0.611726
iroN XOO0029 TonB-dependent receptorchromosome CDS30581 399 + 0.614035
katE XOO3423 catalasechromosome CDS3650699 2244 + 0.607397
kch XOO1218 ion transporterchromosome CDS1242856 2424 - 0.659653
kdpA XOO3846 potassium-transporting ATPase A chainchromosome CDS4105825 1794 - 0.638796
kdpB XOO3845 potassium-transporting ATPase B chainchromosome CDS4103764 2049 - 0.646657
kdpC XOO3844 potassium-transporting ATPase C chainchromosome CDS4103094 618 - 0.676375
kefB XOO2188 transport proteinchromosome CDS2298684 2133 + 0.643694
kefB XOO2187 transport proteinchromosome CDS2298394 321 + 0.607477
kefB XOO2189 transport proteinchromosome CDS2299810 405 + 0.65679
kefC XOO0469 glutathione-regulated potassium-efflux system proteinchromosome CDS482382 1818 - 0.654015
kgtP XOO4604 dicarboxylate transport proteinchromosome CDS4907567 1431 - 0.614955
kup XOO1662 potassium uptake proteinchromosome CDS1725559 1908 + 0.643082
mauG XOO0119 methylamine utilization protein precursorchromosome CDS119494 1062 - 0.551789
mdoG XOO0239 periplasmic glucan biosynthesis proteinchromosome CDS250363 1605 + 0.636137
mgtE XOO0470 Mg++ transporterchromosome CDS484877 1368 + 0.652778
mgtE XOO1276 Mg++ transporterchromosome CDS1308756 1362 - 0.650514
modA XOO1195 molybdate-binding periplasmic protein; permeasechromosome CDS1222545 810 - 0.649383
modB XOO1194 molybdate transport permease proteinchromosome CDS1221842 693 - 0.676768
modC XOO1193 ATP-binding component of molybdate transportchromosome CDS1221228 654 - 0.648318
nasF XOO3098 nitrate transport ATP-binding proteinchromosome CDS3325450 372 - 0.647849
nasF XOO3099 nitrate transport ATP-binding proteinchromosome CDS3325454 246 - 0.634146
natA XOO0388 sodium ABC transporter ATP-binding proteinchromosome CDS391081 861 + 0.632985
natB XOO0389 ABC transporter sodium permeasechromosome CDS391938 1194 + 0.631491
ndhF XOO4064 NADH dehydrogenase subunit 5chromosome CDS4348236 2829 + 0.633439
nodQ XOO3396 ATP sulfurylase; adenylylsulfate kinasechromosome CDS3619211 1980 - 0.641414
nodQ XOO1943 ATP sulfurylase/adenylylsulfate kinasechromosome CDS2044464 231 - 0.718615
nodQ XOO1942 ATP sulfurylase/adenylylsulfate kinasechromosome CDS2043669 795 - 0.627673
nrtB XOO3772 permeasechromosome CDS4022583 762 + 0.691601
nrtCD XOO3770 ABC transporter ATP-binding componentchromosome CDS4021752 621 + 0.63124
nrtCD XOO3771 ABC transporter ATP-binding componentchromosome CDS4022137 450 + 0.64
nuoL XOO3224 NADH-ubiquinone oxidoreductase NQO12 subunitchromosome CDS3464470 2160 - 0.606481
oar XOO3320 Oar proteinchromosome CDS3551120 3189 + 0.60646
oar XOO3204 Oar proteinchromosome CDS3441028 3195 - 0.564319
oprO XOO1116 polyphosphate-selective porin Ochromosome CDS1142521 1272 - 0.643082
oprO XOO2460 polyphosphate-selective porin Ochromosome CDS2612805 1251 + 0.628297
oprO XOO1104 porin Ochromosome CDS1128964 1242 - 0.608696
pedG XOO3103 putative FAD-dependent monooxygenasechromosome CDS3327766 390 + 0.648718
phaC XOO4065 PhaCchromosome CDS4351061 378 + 0.613757
phaD XOO4066 PhaDchromosome CDS4351435 1545 + 0.656958
phaE XOO4067 PhaEchromosome CDS4352976 507 + 0.619329
phaF XOO4068 PhaFchromosome CDS4353479 285 + 0.607018
phoA XOO3296 alkaline phosphatasechromosome CDS3528843 1707 + 0.682484
phoD XOO4555 alkaline phosphatase Dchromosome CDS4853872 1719 - 0.678883
phoU XOO2466 phosphate regulon transcriptional regulatorchromosome CDS2619413 777 + 0.643501
phoX XOO2461 phosphate binding proteinchromosome CDS2614146 1119 + 0.62109
phuR XOO1532 outer membrane hemin receptorchromosome CDS1565447 204 - 0.715686
phuR XOO1531 outer membrane hemin receptorchromosome CDS1563631 1836 - 0.639434
pitA XOO2974 transport proteinchromosome CDS3180093 1128 - 0.648936
piuB XOO0407 iron-uptake factorchromosome CDS413118 2667 + 0.661042
pmrB XOO2001 multidrug resistance membrane translocasechromosome CDS2108643 1581 + 0.633776
ppk XOO3668 polyphosphate kinasechromosome CDS3924277 2118 + 0.639282
ppx XOO3669 exopolyphosphatasechromosome CDS3926467 1626 + 0.656827
proP XOO2231 Prop transport proteinchromosome CDS2345293 1164 - 0.636598
proP XOO0038 proline/betaine transporterchromosome CDS39651 600 - 0.655
proP XOO0037 proline-betaine transporterchromosome CDS38719 933 - 0.63344
pstA XOO2464 ABC transporter phosphate permeasechromosome CDS2617628 870 + 0.627586
pstB XOO2465 phosphate ABC transporter ATP-binding proteinchromosome CDS2618460 891 + 0.603816
pstC XOO2463 ABC transporter phosphate permeasechromosome CDS2616654 975 + 0.64
pstS XOO2462 ABC transporter phosphate binding proteinchromosome CDS2615405 1137 + 0.649956
ptr XOO1253 MFS transporterchromosome CDS1281447 345 - 0.631884
rmrB XOO3985 MFS transporterchromosome CDS4254528 1308 - 0.65367
rmrB XOO2779 transport proteinchromosome CDS2942800 1593 - 0.639046
rpfD XOO2874 regulatory proteinchromosome CDS3087250 1083 - 0.66482
sac1 XOO3374 sulfur deprivation response regulatorchromosome CDS3596443 1863 + 0.630703
sbp XOO3690 ABC transporter sulfate binding proteinchromosome CDS3952818 1098 - 0.636612
smf2 XOO2205 manganese transport proteinchromosome CDS2318063 1407 - 0.628287
sodB XOO3208 iron superoxide dismutasechromosome CDS3446758 579 + 0.633851
sodC2 XOO4481 superoxide dismutasechromosome CDS4778189 741 - 0.653171
sodM XOO2712 superoxidase dismutasechromosome CDS2872091 612 - 0.607843
sodM XOO2828 superoxidase dismutasechromosome CDS3026743 774 + 0.617571
srpA XOO0447 catalasechromosome CDS453959 1092 - 0.678571
sseA XOO2447 thiosulfate sulfurtransferasechromosome CDS2604677 873 - 0.689576
suc1 XOO1100 sugar transporterchromosome CDS1123565 1479 + 0.636917
sugE XOO4155 SugEchromosome CDS4432936 402 - 0.606965
tetA XOO0289 tetracycline-efflux transporterchromosome CDS299831 1305 + 0.672031
tetV XOO2680 drug:proton antiporterchromosome CDS2842400 1251 + 0.67466
ttuB XOO4621 MFS transporterchromosome CDS4922409 1479 - 0.661258
vanK XOO4221 MFS transporterchromosome CDS4500443 1413 - 0.639774
xcysJ XOO3399 sulfite reductase flavoproteinchromosome CDS3623519 606 + 0.660066
xylE XOO2909 MFS transporterchromosome CDS3116940 1506 - 0.644754
yadF XOO2423 carbonic anhydrasechromosome CDS2583625 762 + 0.604987
yadQ XOO1536 chloride channelchromosome CDS1568007 1446 - 0.665284
yaeE XOO0714 ABC transporter permeasechromosome CDS733296 696 + 0.686782
ybaL XOO1362 cation:proton antiporterchromosome CDS1389297 2121 - 0.66761
ybaR XOO4018 sulfate permeasechromosome CDS4289531 1530 - 0.649673
ybeX XOO2771 polar amino acid transporterchromosome CDS2933232 897 + 0.630992
ycaD XOO1653 transmembrane transport proteinchromosome CDS1716174 1524 - 0.652231
yceE XOO1356 transport proteinchromosome CDS1380530 1197 - 0.660819
ychM XOO2456 sulfate transporterchromosome CDS2609529 1008 - 0.604167
ychM XOO2455 sulfate transporterchromosome CDS2609426 363 - 0.61708
ygjT XOO4626 export proteinchromosome CDS4927345 1113 + 0.625337
yhjE XOO2788 metabolite transport proteinchromosome CDS2954400 1536 - 0.638021
yhjX XOO2791 integral membrane transporterchromosome CDS2959451 1710 - 0.646784
yieO XOO2799 drug resistance translocasechromosome CDS2975806 1515 + 0.650165
yjcE XOO0675 Na+:H+ antiporterchromosome CDS695245 1788 + 0.650447
yjl094C XOO1557 cation:proton antiporterchromosome CDS1588788 1266 + 0.632701
ylmA XOO4515 ABC transporter ATP-binding proteinchromosome CDS4814963 873 + 0.662085
yncD XOO0017 iron transporterchromosome CDS19672 2211 + 0.677069
ynfM XOO4349 MFS transporterchromosome CDS4626338 1398 - 0.669528
yojM XOO4482 superoxide dismutase like proteinchromosome CDS4778892 606 - 0.70297