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2024-05-01 07:23:48

Gene list

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COG category: Inorganic ion transport and metabolism
Organism: Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529

Number of genes found: 153

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Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Bd0368 Cation efflux system proteinchromosome CDS345768 1038 + 0.537572
NA Bd0150 hypothetical protein predicted by Glimmer/Criticachromosome CDS135732 1011 + 0.504451
NA Bd2285 Multisubunit Na+/H+ antiporterchromosome CDS2179983 297 - 0.538721
NA Bd2594 hypothetical protein predicted by Glimmer/Criticachromosome CDS2513516 1134 - 0.529982
NA Bd0693 Major facilitator family transporterchromosome CDS644543 1185 - 0.555274
NA Bd2628 chromosome CDS2544847 1101 + 0.552225
NA Bd3499 hypothetical protein predicted by Glimmer/Criticachromosome CDS3409126 312 - 0.503205
NA Bd1656 Ferric uptake regulator-like proteinchromosome CDS1588493 450 + 0.511111
NA Bd2656 hypothetical protein predicted by Glimmer/Criticachromosome CDS2578863 396 - 0.522727
NA Bd2280 putative multisubunit Na+/H+ antiporterchromosome CDS2177611 330 - 0.551515
NA Bd0237 conserved hypothetical proteinchromosome CDS223413 786 - 0.510178
NA Bd2609 cation transport ATPase, E1-E2 familychromosome CDS2525910 2397 + 0.537338
NA Bd1348 putative cation-transporting ATPasechromosome CDS1274157 276 - 0.456522
NA Bd0575 Iron-regulated protein A precursorchromosome CDS532495 1086 + 0.502762
NA Bd2172 putative Na+/H+ exchange proteinchromosome CDS2072468 1167 + 0.523565
NA Bd1236 probable DNA-binding stress proteinchromosome CDS1172837 504 + 0.509921
NA Bd1753 putative multidrug efflux transporterchromosome CDS1693383 438 + 0.527397
NA Bd2221 Na/Pi-cotransporter family proteinchromosome CDS2116850 1608 + 0.516169
NA Bd3763 putative arsenical pump-driving ATPasechromosome CDS3637323 921 - 0.52443
NA Bd0333 ampG proteinchromosome CDS316952 1344 - 0.550595
NA Bd0008 hypothetical protein predicted by Glimmer/Criticachromosome CDS9925 357 + 0.445378
NA Bd3539 probable phosphodiesterase/ alkaline phosphatase Dchromosome CDS3442607 1320 + 0.512879
NA Bd0476 conserved hypothetical proteinchromosome CDS446719 1812 - 0.516004
NA Bd2084 cation:proton antiporterchromosome CDS1994650 2241 - 0.506917
NA Bd2005 hypothetical protein predicted by Glimmer/Criticachromosome CDS1918731 978 + 0.449898
NA Bd2346 conserved hypothetical proteinchromosome CDS2247486 2568 + 0.492991
NA Bd1291 hypothetical protein predicted by Glimmer/Criticachromosome CDS1223828 687 + 0.439592
NA Bd0660 conserved hypothetical proteinchromosome CDS611069 1095 - 0.50411
NA Bd3331 hypothetical protein predicted by Glimmer/Criticachromosome CDS3244077 297 + 0.457912
NA Bd1302 putative molybdopterin biosynthesis proteinchromosome CDS1232363 324 + 0.512346
NA Bd0265 hypothetical protein predicted by Glimmer/Criticachromosome CDS253815 555 + 0.526126
NA Bd1435 putative NAD(FAD)-dependent dehydrogenaseschromosome CDS1352131 1566 + 0.54023
NA Bd1742 putative sulfurylasechromosome CDS1675389 522 + 0.532567
NA Bd1554 hypothetical protein predicted by Glimmer/Criticachromosome CDS1480907 579 - 0.507772
NA Bd1607 Cytochrome c3chromosome CDS1537756 546 + 0.490842
NA Bd3822 conserved hypothetical proteinchromosome CDS3690443 339 + 0.483776
NA Bd0658 glutathione-regulated K+ efflux antiporterchromosome CDS608772 1953 + 0.525346
NA Bd2384 hypothetical protein predicted by Glimmer/Criticachromosome CDS2290671 1104 - 0.524457
NA Bd1735 putative carbonic anhydrasechromosome CDS1669807 891 - 0.516274
NA Bd3372 ABC-type Manganese and zinc uptake system, ATPase component.chromosome CDS3284573 570 + 0.501754
NA Bd0260 hypothetical protein predicted by Glimmer/Criticachromosome CDS249122 804 + 0.471393
NA Bd3180 hypothetical protein predicted by Glimmer/Criticachromosome CDS3100534 759 + 0.536232
NA Bd2683 hypothetical protein predicted by Glimmer/Criticachromosome CDS2606444 1440 + 0.527778
NA Bd3762 Adventurous gliding motility protein Rchromosome CDS3636253 1074 - 0.50838
NA Bd0325 probable arsenate reductasechromosome CDS309646 348 - 0.520115
NA Bd1577 multidrug resistance proteinchromosome CDS1507123 1188 - 0.531987
NA Bd2308 MFS transporterchromosome CDS2202639 1197 - 0.524645
NA Bd2284 NADH dehydrogenasechromosome CDS2178526 1461 - 0.530459
NA Bd0355 putative arsenate reductasechromosome CDS332610 360 - 0.45
NA Bd2226 Cation efflux system protein, AcrB/AcrD/AcrF family proteinchromosome CDS2123203 3033 + 0.527201
NA Bd1689 hypothetical protein predicted by Glimmer/Criticachromosome CDS1625547 1224 + 0.392974
NA Bd1572 TonB-dependent receptorchromosome CDS1499244 2130 - 0.510798
NA Bd0460 hypothetical protein predicted by Glimmer/Criticachromosome CDS432517 336 - 0.488095
NA Bd0880 putative periplasmic protein cpxPchromosome CDS831842 435 + 0.510345
NA Bd2297 Heavy-metal transporting CPX-type ATPasechromosome CDS2190337 2079 - 0.498316
NA Bd0731 hypothetical protein predicted by Glimmer/Criticachromosome CDS692428 1218 - 0.514778
NA Bd2215 cation-efflux system membrane proteinchromosome CDS2113287 933 - 0.50911
NA Bd2283 conserved hypothetical proteinchromosome CDS2178191 339 - 0.498525
NA Bd3532 conserved hypothetical proteinchromosome CDS3436119 411 - 0.518248
NA Bd1720 putative permeasechromosome CDS1655684 1257 + 0.509149
NA Bd0754 putative proteasechromosome CDS716548 534 - 0.488764
NA Bd3549 rhodanese-related sulfurtransferaseschromosome CDS3453366 360 + 0.505556
NA Bd3371 ABC-type metal ion transport system, periplasmic component.chromosome CDS3283701 876 + 0.523973
NA Bd0984 conserved hypothetical proteinchromosome CDS929462 441 - 0.535147
NA Bd1887 2-oxoglutarate/malate translocatorchromosome CDS1807713 1467 + 0.541922
NA Bd2747 hypothetical protein predicted by Glimmer/Criticachromosome CDS2668168 450 + 0.506667
NA Bd2779 putative amine oxidasechromosome CDS2690950 1623 + 0.526186
NA Bd2888 hypothetical protein predicted by Glimmer/Criticachromosome CDS2797773 207 + 0.521739
NA Bd1003 conserved hypothetical proteinchromosome CDS950557 366 + 0.530055
NA Bd1392 TonB-dependent siderophore receptor, putativechromosome CDS1317552 2097 - 0.530758
NA Bd2286 NADH dehydrogenasechromosome CDS2180276 2562 - 0.517955
NA Bd0061 chromosome CDS55889 915 + 0.513661
NA Bd1463 hypothetical protein predicted by Glimmer/Criticachromosome CDS1384618 648 + 0.493827
appB Bd2192 dipeptide transport system permease protein DppBchromosome CDS2092633 972 + 0.52572
appC Bd2193 ABC transporter, membrane spanning proteinchromosome CDS2093616 1215 + 0.525926
appD Bd2189 putative oligopeptide transport system ATP-binding proteinchromosome CDS2088910 969 + 0.53354
bfr Bd1514 bacterioferritinchromosome CDS1437156 429 + 0.454545
cah Bd2259 chromosome CDS2157431 738 - 0.48645
catA Bd0798 chromosome CDS747723 1434 - 0.51046
cbaB Bd3294 oxidase-related proteinchromosome CDS3213570 1041 - 0.501441
ccoS Bd2610 cytochrome oxidase maturation protein, cbb3-typechromosome CDS2528303 156 + 0.455128
ccpA Bd0904 chromosome CDS857411 1089 - 0.51607
chaA Bd2135 probable Ca2+/H+ antiporter ChaAchromosome CDS2042214 1116 + 0.511649
chrA Bd1832 chromate transport proteinchromosome CDS1757772 1137 - 0.532982
copA Bd2224 copper-transporting ATPase copAchromosome CDS2120504 2175 - 0.530575
corA Bd1030 magnesium and cobalt transport proteinchromosome CDS977306 927 - 0.473571
corD Bd2556 ApaG proteinchromosome CDS2469463 429 + 0.487179
cutA Bd0980 divalent cation tolerance proteinchromosome CDS926365 315 - 0.488889
dps Bd2620 putative DNA protection during starvation or oxydative stress transcription regulator proteinchromosome CDS2537035 507 + 0.493097
eriC Bd1816 chloride channel proteinchromosome CDS1743324 1329 - 0.519187
eriC2 Bd2173 voltage-gated chloride channel family proteinchromosome CDS2073653 1221 - 0.530713
eriC3 Bd2378 chloride channel proteinchromosome CDS2283060 1329 + 0.541008
fecA Bd2648 outer membrane iron(III) dicitrate receptorchromosome CDS2573171 2064 + 0.528585
fecB Bd2385 ABC-type Fe3+-siderophores transport systemschromosome CDS2291870 804 - 0.519901
feoA Bd1866 putative ferrous iron transport protein Achromosome CDS1790975 231 + 0.480519
feoB Bd1867 ferrous iron transport protein Bchromosome CDS1791181 1917 + 0.527908
fur Bd2444 ferric uptake regulation proteinchromosome CDS2356422 498 - 0.514056
futA Bd1074 putative iron ABC transporterchromosome CDS1017506 993 + 0.483384
gufA Bd2621 gufA proteinchromosome CDS2537567 756 + 0.558201
katA Bd1154 chromosome CDS1094604 1530 + 0.516993
kdpA Bd1757 potassium-transporting ATPase, A subunitchromosome CDS1695304 483 + 0.534162
kdpA Bd1755 potassium-transporting ATPase, A subunitchromosome CDS1694848 426 + 0.502347
kef Bd2267 putative potassium/proton antiporterchromosome CDS2165200 2220 - 0.522523
kup Bd1998 KUP system, potassium uptake transmembrane proteinchromosome CDS1912073 2010 + 0.508458
mgtE Bd2544 Mg2+ transporter MgtEchromosome CDS2453260 1344 + 0.545387
mtbA Bd2344 mtbAchromosome CDS2243692 1365 - 0.517949
mxcB Bd3361 iron utilization proteinchromosome CDS3277237 792 + 0.532828
napA Bd0345 Na/H antiporterchromosome CDS327682 885 - 0.515254
norB Bd2599 nitric-oxide reductase subunit Bchromosome CDS2519163 1326 - 0.535445
norD Bd2597 norD proteinchromosome CDS2516565 1830 - 0.536612
nrfA Bd2825 nitrite reductase periplasmic cytochrome c552chromosome CDS2729673 1380 + 0.531159
nrtA Bd2020 ABC-type transporter nitrate-binding proteinchromosome CDS1930370 933 - 0.473741
nrtB Bd2021 ABC-type nitrate transporter, permease proteinchromosome CDS1931299 762 - 0.48294
nrtC Bd2022 ABC-type nitrate transporter, ATP-binding proteinchromosome CDS1932057 801 - 0.493134
nuoL Bd3888 NADH dehydrogenase I chain Lchromosome CDS3756297 1932 - 0.506729
oppB Bd2710 oligopeptide ABC transporter, permease proteinchromosome CDS2631265 933 - 0.513398
oppC Bd2709 oligopeptide transport system permease proteinchromosome CDS2630444 825 - 0.513939
pacL Bd0916 Cation transporting ATPasechromosome CDS868516 2478 + 0.533898
phnA Bd2652 Alkylphosphonate utilization operon proteinchromosome CDS2577162 357 + 0.492997
phnC Bd3104 phosphonate ABC transporter ATP-binding proteinchromosome CDS3012259 786 - 0.533079
phnD Bd3105 Phosphonates-binding proteinchromosome CDS3013041 894 - 0.496644
phnD Bd0302 Phosphonates-binding proteinchromosome CDS292438 918 + 0.518519
phnE Bd3103 ABC-type phosphonates transport system permease proteinchromosome CDS3011271 969 - 0.514964
phoD Bd2513 putative phosphodiesterase/alkaline phosphatase Dchromosome CDS2418889 1068 + 0.521536
phoD Bd0859 Alkylphosphonate ABC tranporterchromosome CDS807098 891 + 0.483726
phoU Bd1016 phosphate transport system regulatory proteinchromosome CDS964596 675 + 0.497778
pilI Bd0861 pilus biogenesis protein and ABC-type transporterchromosome CDS808743 759 + 0.505929
ppk Bd1010 chromosome CDS954925 2181 + 0.513067
ppx Bd1525 chromosome CDS1447317 990 + 0.494949
ppx Bd1014 chromosome CDS962483 957 - 0.535005
pspE Bd0919 phage shock proteinchromosome CDS871527 381 + 0.480315
pstA Bd1660 phosphate ABC transporter, permease proteinchromosome CDS1592539 918 + 0.518519
pstB Bd1661 phosphate transport system ATP-binding proteinchromosome CDS1593460 768 + 0.509115
pstC Bd1659 Permease protein of phosphate ABC transporterchromosome CDS1591600 939 + 0.531416
pstS Bd1658 Periplasmic phosphate-binding protein of ABC transporterchromosome CDS1590589 1002 + 0.481038
sac1 Bd2145 Sulfur deprivation response regulatorchromosome CDS2050506 1839 - 0.528004
slc39 Bd2019 solute carrier family 39 (iron-regulated transporter)chromosome CDS1929044 1323 + 0.51096
sodB Bd3617 chromosome CDS3513569 621 + 0.483092
sodB Bd2407 chromosome CDS2316430 582 + 0.503436
sodC Bd0295 chromosome CDS279177 570 - 0.489474
sodC Bd1401 superoxide dismutasechromosome CDS1326143 543 + 0.500921
sseA Bd2337 thiosulfate sulfurtransferasechromosome CDS2235421 846 - 0.50591
ssuA Bd2750 putative solute-binding periplasmic protein of ABC transportchromosome CDS2670249 1032 - 0.516473
ssuB Bd2748 ABC transporter ATP-binding proteinchromosome CDS2668621 801 - 0.524345
ssuC Bd2749 ABC transporter , permease componentchromosome CDS2669421 828 - 0.531401
sugE Bd2506 molecular chaperone sugEchromosome CDS2411801 396 - 0.535354
tcaB Bd0395 drug resistance transporter, Bcr/CflA familychromosome CDS372640 1191 - 0.529807
tetA Bd0657 tetracycline-efflux transporterchromosome CDS607628 1104 - 0.536232
tetA Bd0461 multidrug resistance proteinchromosome CDS432856 1218 - 0.529557
thiP Bd0594 thiamine transport system permease protein ThiPchromosome CDS550930 1464 + 0.510929
thiQ Bd0595 ABC-type thiamine transport protein, ATP-bindingchromosome CDS552371 627 + 0.53429
ydeR Bd3656 MFS permeasechromosome CDS3546676 1227 + 0.541972
ygjT Bd3076 putative transport proteinchromosome CDS2987250 978 + 0.492843