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2024-05-02 17:50:26

Gene list

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COG category: Inorganic ion transport and metabolism
Organism: Photorhabdus luminescens subsp. laumondii TTO1, TTO1

Number of genes found: 213

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Photorhabdus luminescens subsp. laumondii TTO1, TTO1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA plu0567 chromosome CDS642061 1212 + 0.30033
NA plu4257 chromosome CDS4979634 1629 - 0.422959
NA plu2892 chromosome CDS3422992 432 - 0.418981
NA plu0740 chromosome CDS851429 1014 - 0.476331
NA plu2607 chromosome CDS3048878 1197 + 0.42523
NA plu3136 chromosome CDS3696159 1167 - 0.397601
NA plu2199 chromosome CDS2586407 1386 + 0.423521
NA plu1999 chromosome CDS2369608 1335 + 0.485393
NA plu3628 chromosome CDS4278537 579 - 0.364421
NA plu3992 chromosome CDS4680048 963 - 0.403946
NA plu4424 chromosome CDS5175988 1197 - 0.432749
NA plu3134 chromosome CDS3692924 1323 - 0.380197
NA plu2687 chromosome CDS3190475 894 - 0.392617
NA plu3554 chromosome CDS4188321 417 - 0.434053
NA plu2577 chromosome CDS3018661 984 - 0.413618
NA plu4255 chromosome CDS4976523 1221 - 0.343161
NA plu2976 chromosome CDS3481532 405 + 0.254321
NA plu1090 chromosome CDS1262741 1515 + 0.49505
NA plu0739 chromosome CDS848739 2604 - 0.462366
NA plu2636 chromosome CDS3086440 795 + 0.446541
NA plu1000 chromosome CDS1185511 1209 + 0.368073
NA plu3738 chromosome CDS4407509 1137 + 0.413369
NA plu4680 chromosome CDS5456759 1518 + 0.424242
NA plu1280 chromosome CDS1488886 1191 - 0.45508
NA plu0427 chromosome CDS455150 360 + 0.411111
NA plu3830 chromosome CDS4499634 1707 + 0.491506
NA plu4161 chromosome CDS4861438 1104 - 0.439312
NA plu2789 chromosome CDS3309647 429 + 0.32634
NA plu3848 chromosome CDS4519729 630 - 0.436508
NA plu1505 chromosome CDS1802922 1155 + 0.319481
NA plu4084 chromosome CDS4770938 1188 - 0.349327
NA plu0203 chromosome CDS209221 312 + 0.362179
NA plu2631 chromosome CDS3081215 198 + 0.348485
NA plu4205 chromosome CDS4918735 744 - 0.372312
NA plu3530 chromosome CDS4128470 1677 - 0.35003
NA plu1442 chromosome CDS1735205 1191 + 0.404702
NA plu0031 chromosome CDS26532 1011 + 0.400593
NA plu2089 chromosome CDS2473197 1206 - 0.492537
NA plu4035 chromosome CDS4725525 975 + 0.418462
NA plu2635 chromosome CDS3085439 1002 + 0.452096
NA plu0428 chromosome CDS455530 288 + 0.451389
NA plu0426 chromosome CDS454745 396 + 0.477273
NA plu0985 chromosome CDS1168812 1230 - 0.478862
NA plu3561 chromosome CDS4195575 1533 - 0.449446
NA plu0538 chromosome CDS594566 231 - 0.307359
NA plu2751 chromosome CDS3262945 357 + 0.431373
NA plu4232 chromosome CDS4955352 1449 + 0.412008
NA plu2317 chromosome CDS2715460 1245 + 0.468273
NA plu2715 chromosome CDS3218668 2277 - 0.386034
NA plu4564 chromosome CDS5328093 1227 - 0.370823
NA plu3924 chromosome CDS4602260 1524 - 0.481627
NA plu2040 chromosome CDS2409735 834 - 0.459233
NA plu4840 chromosome CDS5612938 438 - 0.413242
NA plu0926 chromosome CDS1066958 1386 + 0.445887
NA plu2765 chromosome CDS3276940 792 - 0.388889
NA plu2316 chromosome CDS2713457 2007 + 0.43996
NA plu4671 chromosome CDS5447737 1086 - 0.421731
NA plu0867 chromosome CDS995109 654 - 0.414373
NA plu0117 chromosome CDS121670 1212 + 0.329208
NA plu0728 chromosome CDS836225 1287 + 0.378399
NA plu1247 chromosome CDS1442315 1197 + 0.455305
NA plu1533 chromosome CDS1834716 222 - 0.378378
NA plu4328 chromosome CDS5057684 1209 - 0.354839
NA plu1132 chromosome CDS1312578 264 - 0.340909
NA plu2074 chromosome CDS2456014 1701 - 0.458554
NA plu1003 chromosome CDS1188823 1212 + 0.335809
NA plu2224 chromosome CDS2616468 1275 - 0.421176
NA plu1542 chromosome CDS1844996 1173 + 0.481671
NA plu2634 chromosome CDS3084624 819 + 0.478632
NA plu2170 chromosome CDS2556480 1026 - 0.464912
NA plu2633 chromosome CDS3083554 1074 + 0.430168
NA plu1174 chromosome CDS1357842 951 + 0.3796
NA plu1786 chromosome CDS2129319 336 - 0.431548
NA plu2566 chromosome CDS3010746 333 - 0.408408
NA plu2248 chromosome CDS2644252 582 - 0.396907
NA plu2482 chromosome CDS2922556 1758 - 0.432878
NA plu0148 chromosome CDS154613 387 + 0.405685
NA plu3849 chromosome CDS4520355 675 - 0.420741
NA plu0061 chromosome CDS56074 1392 - 0.40158
NA plu2852 chromosome CDS3385953 987 - 0.467072
NA plu1346 chromosome CDS1615201 513 - 0.345029
NA plu3736 chromosome CDS4405167 1071 - 0.410831
NA plu3093 chromosome CDS3608327 1833 - 0.480087
NA plu3519 chromosome CDS4116251 2031 - 0.467257
NA plu1254 chromosome CDS1452261 1293 - 0.41918
NA plu4422 chromosome CDS5172338 1650 - 0.464242
NA plu3679 chromosome CDS4333767 714 + 0.442577
NA plu2956 chromosome CDS3460369 423 - 0.378251
NA plu0472 chromosome CDS511849 1194 - 0.471524
NA plu2851 chromosome CDS3385156 801 - 0.410737
NA plu1879 chromosome CDS2225254 1266 - 0.523697
NA plu0916 chromosome CDS1056029 1194 + 0.511725
NA plu3239 chromosome CDS3834188 1152 - 0.50434
NA plu4882 chromosome CDS5652650 1218 - 0.407225
NA plu1875 chromosome CDS2219006 1239 + 0.375303
NA plu1409 chromosome CDS1691868 1233 + 0.320357
NA plu3880 chromosome CDS4556901 1380 + 0.423913
NA plu2123 chromosome CDS2509464 417 + 0.426859
NA plu2853 chromosome CDS3387063 1125 - 0.443556
NA plu0937 chromosome CDS1078270 1182 + 0.274112
NA plu3838 chromosome CDS4510608 2073 + 0.363242
NA plu4090 chromosome CDS4777477 1164 - 0.404639
NA plu2850 chromosome CDS3383046 1980 - 0.428283
NA plu1226 chromosome CDS1418302 1338 - 0.412556
NA plu0476 chromosome CDS516753 1152 + 0.452257
NA plu3814 chromosome CDS4481075 1275 + 0.449412
NA plu3302 chromosome CDS3916424 1008 - 0.388889
NA plu2124 chromosome CDS2509885 330 + 0.448485
NA plu1833 chromosome CDS2178378 981 - 0.295617
NA plu1005 chromosome CDS1191071 1353 + 0.337029
NA plu3513 chromosome CDS4104961 3045 - 0.397701
NA plu3937 chromosome CDS4621869 1239 + 0.446328
NA plu2721 chromosome CDS3229022 387 + 0.390181
NA plu1514 chromosome CDS1813365 1146 - 0.303665
afuA plu0812 Periplasmic ferric iron-binding protein AfuAchromosome CDS942344 1035 - 0.45314
afuB plu0811 Permease component of transport system for ferric iron, AfuB proteinchromosome CDS940156 2067 - 0.496855
ampG plu3873 AmpG proteinchromosome CDS4549142 1479 + 0.437458
amtB plu3856 Probable ammonium transport protein AmtBchromosome CDS4529787 1320 - 0.44697
apaG plu0608 ApaG proteinchromosome CDS690749 378 - 0.455026
bcr plu2866 bicyclonycin resistance protein (sulfonamide resistance protein)chromosome CDS3401448 1185 - 0.42616
bfd plu4729 bacterioferritin-associated ferredoxinchromosome CDS5499407 195 - 0.405128
bfr plu4728 bacterioferritin (BFR) (cytochrome B-1) (cytochrome B-557)chromosome CDS5498854 477 - 0.356394
btuF plu0905 Vitamin B12 transport protein BtuF precursorchromosome CDS1039790 828 - 0.46256
copA plu3824 Copper-transporting P-type ATPasechromosome CDS4491114 2736 + 0.492325
corA plu4635 Magnesium and cobalt transport protein CorAchromosome CDS5403116 951 - 0.457413
corC plu1309 Magnesium and cobalt efflux protein CorCchromosome CDS1518844 882 - 0.438776
cpxP plu4793 periplasmic protein precursorchromosome CDS5566624 495 - 0.438384
cutC plu2101 Copper homeostasis protein CutCchromosome CDS2486288 747 + 0.436412
cutF plu0691 Copper homeostasis protein CutF precursorchromosome CDS794390 672 + 0.41369
cyaY plu4642 CyaY protein, which belongs to the frataxin familychromosome CDS5409889 321 + 0.426791
cynS plu0112 cyanate lyase (cyanate hydrolase) (cyanase)chromosome CDS115374 471 + 0.484076
cynT plu0111 carbonic anhydrasechromosome CDS114687 660 + 0.5
cysA plu1390 Sulfate transport ATP-binding protein cysAchromosome CDS1669023 1089 + 0.467401
cysC plu0711 adenylylsulfate kinase (APS kinase) (adenosine 5'-phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase)chromosome CDS820700 633 + 0.469194
cysI plu0704 sulfite reductase [NADPH] hemoprotein beta-component (SIR-HP)chromosome CDS813451 1731 + 0.455228
cysJ plu0703 sulfite reductase [NADPH] flavoprotein alpha-componentchromosome CDS811649 1803 + 0.441486
cysN plu0710 sulfate adenylyltransferase subunit 1 (sulfate adenylate transferase) (SAT) (ATP-sulfurylase large subunit)chromosome CDS819313 1386 + 0.450938
cysP plu1387 Thiosulfate-binding protein precursor cysPchromosome CDS1666308 1023 + 0.428153
cysQ plu4559 CysQ proteinchromosome CDS5322063 744 - 0.452957
cysW plu1389 Sulfate transport system permease protein cysWchromosome CDS1668163 846 + 0.445626
dppB plu0301 Dipeptide transport system permease protein DppBchromosome CDS319676 1020 + 0.49902
dppC plu0302 Dipeptide transport system permease protein DppCchromosome CDS320706 900 + 0.516667
dppD plu0303 Dipeptide transport ATP-binding protein dppDchromosome CDS321618 981 + 0.502548
emrB plu1275 multidrug resistance protein Bchromosome CDS1484036 1542 - 0.435149
fecA plu4446 Iron(III) dicitrate outer membrane transporter precursor protein FecAchromosome CDS5194611 2361 + 0.523083
fecB plu4447 Iron(III) dicitrate-binding periplasmic protein precursor FecBchromosome CDS5197031 909 + 0.531353
fecC plu4448 Iron(III) dicitrate transport system permease protein FecCchromosome CDS5197936 999 + 0.556557
fecD plu4449 Iron(III) dicitrate transport system permease protein FecDchromosome CDS5198931 957 + 0.552769
fecE plu4450 Iron(III) dicitrate transport ATP-binding protein FecEchromosome CDS5199888 768 + 0.5
fecR plu4445 Protein fecRchromosome CDS5193561 966 + 0.503106
feoA plu0209 ferrous iron transport protein Achromosome CDS214227 234 - 0.418803
feoB plu0208 ferrous iron transport protein Bchromosome CDS211862 2313 - 0.463035
fepB plu4623 Ferric enterobactin binding periplasmic protein precursor FepBchromosome CDS5389720 1017 + 0.478859
fepC plu4626 Ferric enterobactin transport ATP-binding protein FepCchromosome CDS5392776 813 + 0.451415
fepD plu4624 Ferric enterobactin transport system permease protein FepDchromosome CDS5390733 1014 + 0.501972
fepG plu4625 Ferric enterobactin transport system permease protein FepGchromosome CDS5391733 1059 + 0.503305
fhuE plu4622 FhuE receptor precursor (Outer-membrane receptor for ferric iron uptake)chromosome CDS5387408 2244 + 0.463904
focA plu1614 Formate transporter 1 FocA (Formate channel 1)chromosome CDS1928972 858 - 0.395105
fsr plu3829 Fosmidomycin resistance proteinchromosome CDS4498175 1218 + 0.418719
ftnA plu2689 nonheme ferritin 1chromosome CDS3191952 504 - 0.382937
fur plu1327 ferric uptake transcription regulator (ferric uptake regulator)chromosome CDS1543814 447 - 0.425056
glpE plu0197 Thiosulfate sulfurtransferase GlpEchromosome CDS205415 336 - 0.443452
gppA plu4666 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (guanosine pentaphosphate phosphohydrolase) (pppGpp-5'-phosphohydrolase)chromosome CDS5439582 1503 + 0.45509
hcaC plu2206 3-phenylpropionate dioxygenase ferredoxin subunit (digoxigenin ferredoxin subunit)chromosome CDS2594274 318 + 0.443396
hcaE plu2204 3-phenylpropionate dioxygenase alpha subunit (digoxigenin alpha subunit)chromosome CDS2592374 1362 + 0.472834
hctA plu3290 Probable 3-phenylpropionic acid transporterchromosome CDS3905596 1146 - 0.444154
hemR plu1238 Hemin receptor precursor protein HemRchromosome CDS1429831 2301 - 0.43329
hmuR plu2632 Hemin receptor precursorchromosome CDS3081502 2022 + 0.44906
hpaX plu0981 4-hydroxyphenylacetate permeasechromosome CDS1164251 1377 - 0.486565
katE plu3068 catalasechromosome CDS3575953 1443 + 0.440748
kdpA plu1420 potassium-transporting ATPase A chainchromosome CDS1706551 1707 - 0.473345
kdpB plu1419 potassium-transporting ATPase B chainchromosome CDS1704464 2067 - 0.488147
kdpC plu1418 potassium-transporting ATPase C chainchromosome CDS1703871 582 - 0.441581
metI plu0696 D-methionine transport permease protein MetIchromosome CDS799133 654 - 0.392966
metN plu0697 D-methionine transport ATP-binding protein MetNchromosome CDS799779 1032 - 0.408915
metQ plu0695 D-methionine-binding periplasmic protein precursor MetQchromosome CDS798252 816 - 0.378676
modA plu1476 molybdate-binding periplasmic protein precursorchromosome CDS1770069 771 + 0.450065
modB plu1477 molybdenum transport system permease proteinchromosome CDS1770976 699 + 0.486409
modC plu1478 molybdenum transport ATP-binding proteinchromosome CDS1771668 1065 + 0.446009
modF plu1473 Protein ModFchromosome CDS1766935 1476 - 0.429539
nhaA plu0587 Na(+)/H(+) antiporter 1 (sodium/proton antiporter 1)chromosome CDS668004 1167 + 0.437018
nhaB plu2563 Na(+)/H(+) antiporter 2 (Sodium/proton antiporter 2)chromosome CDS3007885 1548 + 0.420543
nuoL plu3079 NADH dehydrogenase I chain L (NADH-ubiquinone oxidoreductase chain L) (NUO12)chromosome CDS3591162 1848 - 0.488636
oppB plu2492 Oligopeptide transport system permease protein OppBchromosome CDS2931930 921 - 0.442997
oppC plu2491 Oligopeptide transport system permease protein OppCchromosome CDS2931007 909 - 0.456546
oppD plu2490 Oligopeptide transport ATP-binding protein OppFchromosome CDS2929999 999 - 0.456456
phoA plu4256 alkaline phosphatase precursor (APASE)chromosome CDS4978087 1443 - 0.455994
phoU plu0218 Phosphate transport system protein PhoUchromosome CDS225144 732 + 0.45765
pitA plu0119 Low-affinity inorganic phosphate transporterchromosome CDS124616 1491 + 0.466801
ppk plu2763 polyphosphate kinasechromosome CDS3273000 2070 + 0.42029
ppx plu2764 exopolyphosphatase (exopolypase) (metaphosphatase)chromosome CDS3275073 1533 + 0.439661
pstA plu0216 Phosphate transport system permease protein PstAchromosome CDS223454 885 + 0.491525
pstB plu0217 Phosphate transport system permease protein PstBchromosome CDS224365 777 + 0.429858
pstC plu0215 Phosphate transport system permease protein PstCchromosome CDS222481 972 + 0.484568
pstS plu0214 Phosphate-binding periplasmic protein precursor PstSchromosome CDS221324 1041 + 0.448607
sbp plu4773 sulfate-binding protein precursor (sulfate starvation-induced protein 2) (SSI2)chromosome CDS5554387 996 - 0.443775
sodA plu0075 superoxide dismutase [Mn]chromosome CDS73631 627 + 0.433812
sseA plu1522 3-mercaptopyruvate sulfurtransferase (Rhodanese-like protein)chromosome CDS1823983 837 - 0.439665
sugE plu4129 SugE proteinchromosome CDS4817909 315 - 0.444444
thiI plu3884 Thiamine biosynthesis protein ThiIchromosome CDS4560120 1449 - 0.414079
thiP plu0618 Thiamine transport system permease proteinchromosome CDS703020 1611 - 0.484792
trkA plu4698 trk system potassium uptake proteinchromosome CDS5482313 1377 + 0.397967
trkH plu4399 Trk system potassium uptake proteinchromosome CDS5145671 1452 - 0.429752
wzyE plu4652 Putative ECA polymerasechromosome CDS5423479 1380 - 0.418116
yfeA plu2672 Iron (chelated) ABC transporter, periplasmic-binding protein YfeAchromosome CDS3175519 921 + 0.39848
yfeB plu2673 Iron transport system ATP-binding protein YfeBchromosome CDS3176436 897 + 0.434783
yfeC plu2674 Chelated iron transport system membrane protein YfeCchromosome CDS3177329 879 + 0.440273
yfeD plu2675 Chelated iron transport system membrane protein yfeD homologchromosome CDS3178204 888 + 0.438063
zntA plu4108 lead, cadmium, zinc and mercury transporting ATPasechromosome CDS4795724 2286 + 0.468941
znuA plu2115 High affinity zinc uptake system precursor protein ZnuAchromosome CDS2497848 948 + 0.420886
znuB plu2113 High-affinity zinc uptake system membrane protein ZnuBchromosome CDS2496216 786 - 0.466921
znuC plu2114 High affinity zinc uptake system ATP-binding protein ZnuCchromosome CDS2496998 798 - 0.412281
zur plu4373 zinc uptake regulation protein (Zinc uptake regulator)chromosome CDS5105533 513 + 0.438596