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2024-05-08 06:01:50

Gene list

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COG category: Inorganic ion transport and metabolism
Organism: Vibrio cholerae O1 biovar eltor str. N16961, N16961

Number of genes found: 195

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Vibrio cholerae O1 biovar eltor str. N16961, N16961
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VC0042 potassium uptake protein TrkHchromosome I CDS39103 1446 - 0.51314
VC0043 potassium uptake protein TrkAchromosome I CDS40560 1377 - 0.52215
VC0069 multidrug resistance protein, putativechromosome I CDS69296 1203 + 0.501247
VC0078 ferritinchromosome I CDS76782 546 + 0.445055
VC0089 cytochrome c551 peroxidasechromosome I CDS86574 1002 + 0.477046
VC0100 glpE proteinchromosome I CDS98786 321 - 0.461059
VC0123 cyaY proteinchromosome I CDS118690 315 - 0.485714
VC0139 DPS family proteinchromosome I CDS132791 471 - 0.464968
VC0172 peptide ABC transporter, permease proteinchromosome I CDS171999 1029 + 0.501458
VC0173 peptide ABC transporter, permease proteinchromosome I CDS173030 939 + 0.506922
VC0200 iron(III) compound receptorchromosome I CDS206433 2157 + 0.495596
VC0201 iron(III) ABC transporter, ATP-binding proteinchromosome I CDS208648 858 + 0.52331
VC0202 iron(III) ABC transporter, periplasmic iron-compound-binding proteinchromosome I CDS209496 960 + 0.535417
VC0203 iron(III) ABC transporter, permease proteinchromosome I CDS210452 1962 + 0.560143
VC0302 conserved hypothetical proteinchromosome I CDS309994 1191 + 0.534845
VC0304 guanosine-5'-triphosphate,3'-diphosphatepyrophos phatasechromosome I CDS314843 1494 - 0.502008
VC0338 transporter, putativechromosome I CDS357398 1437 - 0.502436
VC0356 conserved hypothetical proteinchromosome I CDS377287 396 + 0.489899
VC0357 conserved hypothetical proteinchromosome I CDS377679 357 + 0.467787
VC0358 conserved hypothetical proteinchromosome I CDS378045 276 + 0.423913
VC0364 bacterioferritin-associated ferredoxinchromosome I CDS383247 189 + 0.439153
VC0365 bacterioferritinchromosome I CDS383505 477 + 0.402516
VC0378 zinc uptake regulation protein, putativechromosome I CDS393507 468 - 0.438034
VC0384 sulfite reductase (NADPH) flavoprotein alpha-componentchromosome I CDS396876 1845 + 0.486721
VC0385 sulfite reductase (NADPH) hemoprotein beta-componentchromosome I CDS398720 1734 + 0.491926
VC0389 Na+/H+ antiporter, putativechromosome I CDS407506 1335 - 0.444944
VC0442 apaG proteinchromosome I CDS471271 381 - 0.47769
VC0475 iron-regulated outer membrane virulence protein, TonB receptor familychromosome I CDS504802 1959 + 0.498213
VC0538 thiosulfate ABC transporter, periplasmic thiosulfate-binding proteinchromosome I CDS569959 1002 + 0.494012
VC0540 sulfate ABC transporter, permease proteinchromosome I CDS571899 864 + 0.515046
VC0541 sulfate ABC transporter, ATP-binding proteinchromosome I CDS572759 1131 + 0.507515
VC0558 hemolysin, putativechromosome I CDS592295 1281 - 0.466042
VC0586 carbonic anhydrase, putativechromosome I CDS614080 669 - 0.467862
VC0587 sulfate permease family proteinchromosome I CDS614896 1647 + 0.501518
VC0608 iron(III) ABC transporter, periplasmic iron-compound-binding proteinchromosome I CDS638885 1059 + 0.457035
VC0609 iron(III) ABC transporter, permease proteinchromosome I CDS640027 1626 + 0.49139
VC0617 peptide ABC transporter, ATP-binding proteinchromosome I CDS652483 984 - 0.485772
VC0618 peptide ABC transporter, permease proteinchromosome I CDS653469 1026 - 0.512671
VC0619 peptide ABC transporter, permease proteinchromosome I CDS654497 987 - 0.483283
VC0676 nptA proteinchromosome I CDS722512 1149 - 0.478677
VC0721 phosphate ABC transporter, periplasmic phosphate-binding protein, putativechromosome I CDS774276 978 + 0.52454
VC0722 exopolyphosphatasechromosome I CDS775321 1572 - 0.473919
VC0723 polyphosphate kinasechromosome I CDS776804 2106 - 0.468661
VC0725 phosphate ABC transporter, permease proteinchromosome I CDS781313 1647 + 0.493625
VC0726 phosphate ABC transporter, ATP-binding proteinchromosome I CDS782962 822 + 0.484185
VC0727 phosphate transport system regulatory protein PhoUchromosome I CDS783817 711 + 0.4782
VC0730 copper homeostasis proteinchromosome I CDS785567 765 - 0.508497
VC0776 ferric vibriobactin ABC transporter, periplasmic ferric vibriobactin-binding proteinchromosome I CDS832470 978 + 0.49591
VC0777 ferric vibriobactin ABC transporter, permease proteinchromosome I CDS833444 1053 + 0.528015
VC0778 ferric vibriobactin ABC transporter, permease proteinchromosome I CDS834475 1077 + 0.522748
VC0779 ferric vibriobactin ABC transporter, ATP-binding proteinchromosome I CDS835668 840 + 0.509524
VC0894 thiamin biosynthesis protein ThiIchromosome I CDS952846 1548 + 0.481266
VC0905 lipoprotein YaeCchromosome I CDS965193 828 - 0.471014
VC0906 ABC transporter, permease proteinchromosome I CDS966039 678 - 0.533923
VC0907 ABC transporter, ATP-binding proteinchromosome I CDS966706 1035 - 0.488889
VC0959 hemolysin, putativechromosome I CDS1023611 876 - 0.497717
VC0992 glutathione-regulated potassium-efflux system protein KefB, putativechromosome I CDS1056821 1587 - 0.47511
VC1033 cation transport ATPase, E1-E2 familychromosome I CDS1097641 2307 + 0.536194
VC1071 transporter, putativechromosome I CDS1137847 1236 + 0.507282
VC1089 periplasmic binding protein-related proteinchromosome I CDS1157232 813 - 0.468635
VC1092 oligopeptide ABC transporter, permease proteinchromosome I CDS1160448 921 + 0.464712
VC1093 oligopeptide ABC transporter, permease proteinchromosome I CDS1161382 903 + 0.497231
VC1094 oligopeptide ABC transporter, ATP-binding proteinchromosome I CDS1162309 975 + 0.499487
VC1123 hypothetical proteinchromosome I CDS1191714 540 + 0.488889
VC1207 hypothetical proteinchromosome I CDS1282693 948 - 0.486287
VC1261 conserved hypothetical proteinchromosome I CDS1335279 1215 + 0.485597
VC1264 iron-regulated protein A, putativechromosome I CDS1337809 1308 + 0.5
VC1288 periplasmic glucans biosynthesis protein MdoGchromosome I CDS1364570 1638 - 0.483516
VC1314 transporter, putativechromosome I CDS1397026 1464 + 0.472678
VC1333 hypothetical proteinchromosome I CDS1416672 552 - 0.485507
VC1356 sulfite reductase, gamma subunit-related proteinchromosome I CDS1446592 330 - 0.451515
VC1369 conserved hypothetical proteinchromosome I CDS1458740 1017 + 0.45821
VC1391 multidrug transporter, putativechromosome I CDS1481602 1407 + 0.52452
VC1393 sugE proteinchromosome I CDS1484824 315 + 0.488889
VC1411 multidrug resistance protein VceBchromosome I CDS1504292 1536 + 0.468099
VC1436 FixS-related proteinchromosome I CDS1533229 165 - 0.418182
VC1437 cation transport ATPase, E1-E2 familychromosome I CDS1533397 2373 - 0.467762
VC1525 ABC transporter, ATP-binding proteinchromosome I CDS1640002 723 + 0.489627
VC1560 catalase/peroxidasechromosome I CDS1671041 2175 + 0.511264
VC1581 NADH dehydrogenase, putativechromosome I CDS1691206 1551 + 0.526757
VC1583 superoxide dismutase, Cu-Znchromosome I CDS1695314 516 - 0.507752
VC1585 catalasechromosome I CDS1696499 1704 - 0.448357
VC1597 multidrug transporter, putativechromosome I CDS1709719 1434 - 0.490237
VC1618 multidrug resistance protein, putativechromosome I CDS1730964 1218 + 0.498358
VC1627 Na+/H+ antiporter proteinchromosome I CDS1750016 1149 - 0.475196
VC1634 multidrug resistance proteinchromosome I CDS1759459 1206 - 0.515755
VC1655 magnesium transporterchromosome I CDS1786971 1356 + 0.499263
VC1695 formate transporter 1, putativechromosome I CDS1829274 843 - 0.46382
VC1901 Na+/H+ antiporterchromosome I CDS2049552 1593 + 0.469554
VC1962 lipoproteinchromosome I CDS2113168 492 + 0.481707
VC1966 conserved hypothetical proteinchromosome I CDS2115867 1881 + 0.496013
VC2031 sulfate permease family proteinchromosome I CDS2184950 1566 + 0.492337
VC2045 superoxide dismutase, Fechromosome I CDS2203190 585 + 0.473504
VC2077 ferrous iron transport protein Bchromosome I CDS2233741 2277 - 0.469038
VC2078 ferrous iron transport protein Achromosome I CDS2236014 231 - 0.47619
VC2081 zinc ABC transporter, periplasmic zinc-binding proteinchromosome I CDS2240563 894 - 0.469799
VC2082 zinc ABC transporter, ATP-binding proteinchromosome I CDS2241531 789 + 0.462611
VC2083 zinc ABC transporter, permease proteinchromosome I CDS2242312 783 + 0.498084
VC2106 ferric uptake regulation proteinchromosome I CDS2263275 453 + 0.439294
VC2145 tyrA proteinchromosome I CDS2300344 909 - 0.488449
VC2150 conserved hypothetical proteinchromosome I CDS2302839 396 + 0.454545
VC2165 arsenate reductasechromosome I CDS2313757 351 + 0.475783
VC2210 vibriobactin utilization protein ViuBchromosome I CDS2360905 816 - 0.458333
VC2211 ferric vibriobactin receptorchromosome I CDS2362024 2064 - 0.462694
VC2215 cation transport ATPase, E1-E2 familychromosome I CDS2368152 2748 + 0.510189
VC2300 ampG protein, putativechromosome I CDS2454099 1389 + 0.478762
VC2323 conserved hypothetical proteinchromosome I CDS2476209 969 - 0.535604
VC2330 conserved hypothetical proteinchromosome I CDS2480146 1245 - 0.516466
VC2334 conserved hypothetical proteinchromosome I CDS2484430 984 + 0.481707
VC2339 chromate resistance protein-related proteinchromosome I CDS2490959 1143 + 0.512686
VC2381 conserved hypothetical proteinchromosome I CDS2545920 831 + 0.507822
VC2441 conserved hypothetical proteinchromosome I CDS2619893 687 + 0.459971
VC2442 pho4 family proteinchromosome I CDS2620683 1302 + 0.496928
VC2522 conserved hypothetical proteinchromosome I CDS2707506 999 + 0.495495
VC2534 magnesium transporterchromosome I CDS2715455 1362 + 0.53304
VC2538 thiamine ABC transporter, permease protein, putativechromosome I CDS2719742 1593 - 0.527307
VC2558 adenylylsulfate kinasechromosome I CDS2739165 648 - 0.533951
VC2559 sulfate adenylate transferase, subunit 1chromosome I CDS2739823 1431 - 0.484976
VC2606 glutathione-regulated potassium-efflux system protein KefBchromosome I CDS2774826 1971 - 0.519533
VC2654 conserved hypothetical proteinchromosome I CDS2824905 435 - 0.452874
VC2690 conserved hypothetical proteinchromosome I CDS2858008 909 - 0.514852
VC2691 periplasmic protein cpxP, putativechromosome I CDS2859114 504 - 0.513889
VC2694 superoxide dismutase, Mnchromosome I CDS2861967 669 + 0.512706
VC2703 conserved hypothetical proteinchromosome I CDS2874699 1746 - 0.519473
VC2722 cysQ proteinchromosome I CDS2895950 906 + 0.530905
VC2756 potassium uptake protein TrkHchromosome I CDS2940002 1458 - 0.489026
VC2761 multidrug resistance proteinchromosome I CDS2946786 1230 + 0.489431
VCA0025 transporter, NadC familychromosome II CDS30484 1389 + 0.4946
VCA0064 TonB system receptor, putativechromosome II CDS70872 2142 + 0.505602
VCA0070 phosphate ABC transporter, periplasmic phosphate-binding proteinchromosome II CDS79395 900 + 0.464444
VCA0071 phosphate ABC transporter, permease proteinchromosome II CDS80309 984 + 0.502033
VCA0072 phosphate ABC transporter, permease proteinchromosome II CDS81292 870 + 0.481609
VCA0073 phosphate ABC transporter, ATP-binding proteinchromosome II CDS82190 756 + 0.47619
VCA0077 sulfate permease family proteinchromosome II CDS86658 1662 - 0.495788
VCA0083 multidrug resistance protein Dchromosome II CDS93581 1212 + 0.488449
VCA0085 hypothetical proteinchromosome II CDS95459 1203 + 0.466334
VCA0100 phage shock protein Echromosome II CDS107928 372 - 0.491935
VCA0103 sulfate permease family proteinchromosome II CDS110871 1779 + 0.510399
VCA0151 oxidoreductase, putativechromosome II CDS168622 1353 + 0.469327
VCA0152 conserved hypothetical proteinchromosome II CDS170049 324 - 0.515432
VCA0153 conserved hypothetical proteinchromosome II CDS170372 312 - 0.448718
VCA0154 conserved hypothetical proteinchromosome II CDS170643 477 - 0.473795
VCA0155 NADH dehydrogenase, putativechromosome II CDS171116 1497 - 0.489646
VCA0156 conserved hypothetical proteinchromosome II CDS172609 354 - 0.50565
VCA0157 NADH dehydrogenase, putativechromosome II CDS172962 2676 - 0.494021
VCA0194 potassium channel protein, putativechromosome II CDS211093 843 - 0.474496
VCA0214 multidrug resistance protein Dchromosome II CDS232449 1245 - 0.498795
VCA0227 iron(III) ABC transporter, periplasmic iron-compound-binding proteinchromosome II CDS248766 1002 + 0.447106
VCA0228 iron(III) ABC transporter, permease proteinchromosome II CDS249820 939 + 0.463259
VCA0229 iron(III) ABC transporter, permease proteinchromosome II CDS250748 951 + 0.491062
VCA0230 iron(III) ABC transporter, ATP-binding proteinchromosome II CDS251701 765 + 0.499346
VCA0260 hypothetical proteinchromosome II CDS279248 195 - 0.492308
VCA0261 hypothetical proteinchromosome II CDS279430 327 - 0.461774
VCA0267 multidrug resistance protein Dchromosome II CDS283612 1140 + 0.466667
VCA0274 carbonic anhydrasechromosome II CDS291259 720 + 0.491667
VCA0403 hypothetical proteinchromosome II CDS376324 258 + 0.410853
VCA0408 hypothetical proteinchromosome II CDS379262 348 + 0.373563
VCA0460 hypothetical proteinchromosome II CDS410246 348 + 0.367816
VCA0524 conserved hypothetical proteinchromosome II CDS458389 963 - 0.47352
VCA0526 conserved hypothetical proteinchromosome II CDS459498 1407 - 0.482587
VCA0529 potassium uptake protein, Kup systemchromosome II CDS463691 1863 + 0.489533
VCA0540 formate transporter 1, putativechromosome II CDS476605 1452 - 0.482094
VCA0546 conserved hypothetical proteinchromosome II CDS484280 957 + 0.473354
VCA0549 phnA proteinchromosome II CDS485878 576 - 0.475694
VCA0554 oxalate/formate antiporter, putativechromosome II CDS490884 1233 - 0.49635
VCA0576 heme transport protein HutAchromosome II CDS514944 2097 + 0.377682
VCA0601 ABC transporter, permease proteinchromosome II CDS537161 1779 - 0.514334
VCA0603 ABC transporter, periplasmic substrate-binding proteinchromosome II CDS540239 1020 - 0.485294
VCA0620 thiosulfate sulfurtransferase SseA, putativechromosome II CDS554614 831 + 0.511432
VCA0625 TonB receptor-related proteinchromosome II CDS560275 2355 - 0.475159
VCA0643 conserved hypothetical proteinchromosome II CDS578263 267 + 0.404494
VCA0644 NADH oxidase, putativechromosome II CDS578595 1704 + 0.504695
VCA0669 sugar transporter family proteinchromosome II CDS605452 1296 + 0.468364
VCA0677 napD proteinchromosome II CDS612218 342 + 0.453216
VCA0685 iron(III) ABC transporter, periplasmic iron-compound-binding proteinchromosome II CDS621501 1035 + 0.485024
VCA0686 iron(III) ABC transporter, permease proteinchromosome II CDS622639 2103 + 0.495483
VCA0706 phosphoglycerate transport regulatory protein PgtC, putativechromosome II CDS648171 1323 - 0.494331
VCA0724 molybdenum ABC transporter, ATP-binding proteinchromosome II CDS667937 1101 - 0.540418
VCA0725 molybdenum ABC transporter, permease proteinchromosome II CDS669051 699 - 0.543634
VCA0726 molybdenum ABC transporter, periplasmic molybdenum-binding proteinchromosome II CDS669750 765 - 0.564706
VCA0753 conserved hypothetical proteinchromosome II CDS697461 1155 + 0.510823
VCA0807 ABC transporter, periplasmic substrate-binding proteinchromosome II CDS751488 837 + 0.459976
VCA0818 magnesium transporter MgtE, putativechromosome II CDS764273 1365 + 0.489377
VCA0834 hypothetical proteinchromosome II CDS779097 954 + 0.485325
VCA0865 hemagglutinin/proteasechromosome II CDS817359 1830 - 0.5
VCA0907 conserved hypothetical proteinchromosome II CDS862985 531 - 0.47081
VCA0908 conserved hypothetical proteinchromosome II CDS863540 582 - 0.453608
VCA0913 hemin ABC transporter, periplasmic hemin-binding protein HutBchromosome II CDS867550 834 + 0.498801
VCA0914 hemin ABC transporter, permease protein, putativechromosome II CDS868395 1032 + 0.525194
VCA0915 hemin ABC transporter, ATP-binding protein HutDchromosome II CDS869494 711 + 0.520394
VCA0972 conserved hypothetical proteinchromosome II CDS918331 1305 - 0.465134
VCA1015 Na+/H+ antiporterchromosome II CDS963699 1434 + 0.493026
VCA1053 conserved hypothetical proteinchromosome II CDS1003208 501 - 0.502994
VCA1099 ABC transporter, permease proteinchromosome II CDS1054920 957 + 0.498433
VCA1100 ABC transporter, permease proteinchromosome II CDS1055857 813 + 0.498155