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2024-05-06 12:34:29

Gene list

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COG category: Inorganic ion transport and metabolism
Organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18

Number of genes found: 263

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Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
HCM1.133 putative membrane proteinpHCM1 CDS104146 345 + 0.486957
HCM1.145 hypothetical proteinpHCM1 CDS112435 393 + 0.547074
HCM1.26c hypothetical proteinpHCM1 CDS8364 609 - 0.525452
STY0042 putative secreted sulfatasechromosome CDS40128 1494 + 0.525435
STY0047 Na(+)/H(+) antiporter 1chromosome CDS46186 1167 + 0.563839
STY0089 putative metabolite transport proteinchromosome CDS91996 1164 + 0.54811
STY0098 puatative sulfatasechromosome CDS96050 1305 + 0.472031
STY0099 hypothetical proteinchromosome CDS97351 312 + 0.403846
STY0101 glutathione-regulated potassium-efflux system protein KefCchromosome CDS98592 1863 + 0.578637
STY0104 CorD proteinchromosome CDS102087 378 - 0.539683
STY0124 putative ABC transporter integral membrane proteinchromosome CDS125516 1611 - 0.594662
STY0183 2-keto-3-deoxygluconate permeasechromosome CDS192388 954 + 0.57652
STY0193 carbonic anhydrasechromosome CDS203598 663 - 0.506787
STY0219 ferrichrome transport ATP-binding protein FhuCchromosome CDS230387 798 + 0.590226
STY0220 ferrichrome-binding periplasmic protein precursorchromosome CDS231184 891 + 0.590348
STY0221 ferrichrome transport protein FhuB precursorchromosome CDS232071 2058 + 0.608358
STY0225 putative membrane proteinchromosome CDS235669 1422 + 0.57173
STY0266 copper homeostasis protein CutF precursor (lipoprotein nlpE)chromosome CDS279279 702 + 0.551282
STY0272 putative lipoprotein precursorchromosome CDS283821 816 - 0.48652
STY0273 putative ABC transporter permease proteinchromosome CDS284675 639 - 0.536776
STY0274 putative ABC transporter ATP-binding proteinchromosome CDS285321 1032 - 0.526163
STY0326 conserved hypothetical proteinchromosome CDS339076 261 + 0.371648
STY0352 probable secreted proteinchromosome CDS360350 408 - 0.465686
STY0380 possible outer membrane proteinchromosome CDS390264 525 + 0.413333
STY0387 putative metabolite transport proteinchromosome CDS393469 1254 + 0.54067
STY0396 ferrioxamine B receptor precursorchromosome CDS404257 2091 + 0.527499
STY0411 putative membrane proteinchromosome CDS424815 216 + 0.490741
STY0414 possible efflux pumpchromosome CDS427110 1200 + 0.5225
STY0464 thiamine biosynthesis protein ThiIchromosome CDS470077 1449 + 0.52864
STY0475 hpothetical major facilitator family transport proteinchromosome CDS480564 1365 - 0.554579
STY0486 AmpG proteinchromosome CDS490748 1476 - 0.565718
STY0536 putative transport proteinchromosome CDS543376 1677 - 0.569469
STY0538 fosmidomycin resistance proteinchromosome CDS545267 1221 - 0.552007
STY0544 copper-transporting ATPasechromosome CDS551169 2502 - 0.590328
STY0568 probable metabolite transport proteinchromosome CDS574305 1248 + 0.459135
STY0628 ferrienterobactin receptor precursorchromosome CDS625677 2256 - 0.54078
STY0629 enterochelin esterasechromosome CDS628121 1215 + 0.597531
STY0634 ferric enterobactin transport ATP-binding protein FepCchromosome CDS634904 795 - 0.567296
STY0635 ferric enterobactin transport protein FepGchromosome CDS635695 990 - 0.6
STY0636 ferric enterobactin transport protein FepDchromosome CDS636684 1008 - 0.612103
STY0637 hypothetical membrane protein p43chromosome CDS637802 1245 + 0.590361
STY0638 ferrienterobactin-binding periplasmic protein precursorchromosome CDS639109 957 - 0.575758
STY0712 haemolysin-related proteinchromosome CDS708474 879 - 0.517634
STY0731 ferric uptake regulation proteinchromosome CDS732380 453 - 0.476821
STY0745 potassium-transporting ATPase C chainchromosome CDS745574 588 - 0.596939
STY0746 potassium-transporting ATPase B chainchromosome CDS746167 1710 - 0.58538
STY0747 potassium-transporting ATPase A chainchromosome CDS747897 1680 - 0.570238
STY0802 ABC transporter permease (FecCD_family)chromosome CDS799013 1080 + 0.559259
STY0803 ABC transporter ATP-binding proteinchromosome CDS800092 777 + 0.563707
STY0811 putative molybdenum transport ATP-binding protein ModF (photorepair protein PhrA)chromosome CDS807495 1476 - 0.549458
STY0814 molybdate-binding periplasmic protein precursorchromosome CDS810271 774 + 0.550388
STY0815 molybdenum transport system permease protein ModBchromosome CDS811044 690 + 0.591304
STY0816 molybdenum transport ATP-binding protein ModCchromosome CDS811736 1059 + 0.555241
STY0870 DNA protection during starvation proteinchromosome CDS861286 504 - 0.484127
STY0901 putative membrane proteinchromosome CDS895006 1212 - 0.572607
STY0919 probable sulfatasechromosome CDS910653 1488 + 0.516129
STY0974 probable formate transporter (formate channel)chromosome CDS967949 858 - 0.482517
STY1051 putative bacteriophage proteinchromosome CDS1033902 507 + 0.532544
STY1111 hypothetical protein in helD-serT intergenic region; putative sulfite reductasechromosome CDS1083598 330 - 0.506061
STY1169 putative transporterchromosome CDS1131729 1281 + 0.45121
STY1187 periplasmic glucans biosynthesis protein MdoG precursorchromosome CDS1146694 1536 + 0.510417
STY1191 putative membrane transport proteinchromosome CDS1151523 1215 - 0.548148
STY1204 putative membrane transporterchromosome CDS1161336 1209 - 0.56493
STY1281 putative calcium/proton antiporterchromosome CDS1235888 1101 - 0.503179
STY1283 conserved hypothetical proteinchromosome CDS1237565 354 - 0.516949
STY1287 nitrite extrusion protein (nitrite facilitator)chromosome CDS1242299 1398 + 0.545064
STY1305 oligopeptide transport system permease protein OppBchromosome CDS1266224 921 + 0.508143
STY1308 oligopeptide transport ATP-binding protein OppDchromosome CDS1268078 1008 + 0.521825
STY1310 possible membrane transport proteinchromosome CDS1270134 837 + 0.477897
STY1320 conserved hypothetical proteinchromosome CDS1277897 879 - 0.536974
STY1375 phage shock protein E precursorchromosome CDS1329002 315 + 0.434921
STY1409 putative membrane transport proteinchromosome CDS1359382 984 + 0.533537
STY1415 putative multidrug transporterchromosome CDS1365999 339 + 0.430678
STY1442 putative exported proteinchromosome CDS1394233 1626 + 0.552891
STY1455 tellurite resistance protein TehAchromosome CDS1405735 1014 + 0.545365
STY1478 probable TonB-dependent receptor YncD precursorchromosome CDS1429522 2121 - 0.532296
STY1489 nitrite extrusion proteinchromosome CDS1444944 1389 - 0.521238
STY1517 putative multidrug efflux proteinchromosome CDS1472365 1242 + 0.496779
STY1519 membrane transport proteinchromosome CDS1475409 1287 + 0.462315
STY1544 putative membrane proteinchromosome CDS1496807 1188 + 0.520202
STY1554 putative membrane transport proteinchromosome CDS1506463 1380 - 0.501449
STY1574 putative voltage gated chloride channel proteinchromosome CDS1523846 1290 + 0.582946
STY1579 putative membrane transport proteinchromosome CDS1528279 1254 + 0.551834
STY1584 putative membrane proteinchromosome CDS1532014 330 - 0.554545
STY1585 putative conserved membrane proteinchromosome CDS1532330 363 - 0.449036
STY1682 copper-zinc superoxide dismutasechromosome CDS1610160 522 - 0.557471
STY1691 superoxide dismutasechromosome CDS1616737 582 + 0.513746
STY1694 putative integral membrane transport proteinchromosome CDS1619853 1206 + 0.544776
STY1764 conserved hypothetical proteinchromosome CDS1687445 192 + 0.510417
STY1793 catalase HPIIchromosome CDS1713175 2253 + 0.539725
STY1805 putative exported proteinchromosome CDS1724211 486 - 0.493827
STY1840 putative membrane proteinchromosome CDS1757163 1185 + 0.579747
STY1850 conserved hypothetical proteinchromosome CDS1762192 363 - 0.509642
STY1861 putative ABC transport ATP-binding subunitchromosome CDS1770057 591 - 0.573604
STY1863 putative inner membrane transport proteinchromosome CDS1771432 813 - 0.565806
STY1864 putative inner membrane transport proteinchromosome CDS1772234 978 - 0.533742
STY1907 putative sulphate transporterchromosome CDS1800435 1686 + 0.568802
STY1929 putative Na+/H+ exchangerchromosome CDS1821412 1734 + 0.546713
STY1935 regulator of intracellular pH; Na+/H+ antiporterchromosome CDS1828430 1545 + 0.530744
STY1937 conserved hypothetical proteinchromosome CDS1830754 342 + 0.51462
STY2025 putative bacteriophage proteinchromosome CDS1897826 651 - 0.482335
STY2036 putative bacteriophage proteinchromosome CDS1905864 498 - 0.556225
STY2058 putative membrane proteinchromosome CDS1920237 555 + 0.324324
STY2080 putative cation transporterchromosome CDS1934303 876 - 0.522831
STY2099 high-affinity zinc uptake system periplasmic binding proteinchromosome CDS1952055 960 - 0.504167
STY2100 high-affinity zinc uptake system ATP-binding proteinchromosome CDS1953078 756 + 0.530423
STY2101 high-affinity zinc uptake system membrane proteinchromosome CDS1953830 786 + 0.552163
STY2115 putative copper homeostasis proteinchromosome CDS1965952 780 - 0.537179
STY2141 ferritin-like proteinchromosome CDS1992209 504 + 0.488095
STY2143 ferritinchromosome CDS1993618 498 + 0.457831
STY2342 putative transporter proteinchromosome CDS2179688 1413 + 0.542109
STY2371 putative nucleoside permeasechromosome CDS2201854 1272 + 0.512579
STY2409 putative n-hydroxybenzoate transporterchromosome CDS2240981 1359 - 0.588668
STY2434 colicin I receptor precursorchromosome CDS2262909 1992 - 0.545683
STY2443 sugar efflux transporterchromosome CDS2274082 1182 + 0.541455
STY2486 putative napAB assembly proteinchromosome CDS2315852 264 - 0.55303
STY2489 putative ABC transporter ATP-binding proteinchromosome CDS2317713 1644 - 0.55292
STY2509 putative transmembrane transport proteinchromosome CDS2342844 1191 - 0.494542
STY2520 putative transport proteinchromosome CDS2354466 1290 - 0.54186
STY2548 NADH dehydrogenase I chain Lchromosome CDS2382686 1842 - 0.579262
STY2563 putative sodium/sulphate transporterchromosome CDS2399017 1827 - 0.558292
STY2603 putative transmembrane transporterchromosome CDS2439613 1179 - 0.608142
STY2625 putative membrane proteinchromosome CDS2459776 942 + 0.497877
STY2645 putative membrane proteinchromosome CDS2479743 1236 + 0.591424
STY2657 xanthosine permeasechromosome CDS2494155 1257 - 0.488465
STY2678 sulphate transport ATP-binding protein CysAchromosome CDS2512849 1095 - 0.587215
STY2679 sulphate transport system permease protein CysWchromosome CDS2513933 876 - 0.545662
STY2681 thiosulphate-binding protein precursorchromosome CDS2515641 1017 - 0.536873
STY2683 conserved hypothetical proteinchromosome CDS2517843 900 - 0.552222
STY2689 putative membrane proteinchromosome CDS2522340 330 + 0.442424
STY2720 conserved hypothetical proteinchromosome CDS2557647 357 + 0.521008
STY2736 putative arsenate reductase (arsenical pump modifier)chromosome CDS2573190 360 + 0.566667
STY2742 polyphosphate kinasechromosome CDS2578652 2067 + 0.497339
STY2743 exopolyphosphatasechromosome CDS2580723 1542 + 0.538911
STY2779 putative thiosulfate sulfurtransferasechromosome CDS2637127 843 + 0.590747
STY2801 putative 3-phenylpropionate permeasechromosome CDS2656457 1140 - 0.578947
STY2820 putative transmembrane transport proteinchromosome CDS2683501 1197 - 0.466165
STY2847 alpha-ketoglutarate permeasechromosome CDS2709975 1302 - 0.517665
STY2918 conserved hypothetical proteinchromosome CDS2799245 528 + 0.558712
STY2938 putative transmembrane transport proteinchromosome CDS2812335 1185 + 0.592405
STY2941 multidrug resistance protein Bchromosome CDS2815862 1539 + 0.569851
STY2973 formate hydrogenlyase subunit 3chromosome CDS2849437 1827 - 0.613027
STY3036 possible membrane transport proteinchromosome CDS2903746 1209 - 0.542597
STY3075 sulfite reductase (NADPH) hemoprotein alpha subunitchromosome CDS2937829 1713 - 0.569177
STY3076 sulfite reductase (NADPH) flavoprotein beta subunitchromosome CDS2939541 1800 - 0.576667
STY3091 possible secreted proteinchromosome CDS2954726 1119 + 0.409294
STY3149 putative membrane proteinchromosome CDS3020503 714 + 0.504202
STY3152 putative membrane proteinchromosome CDS3022923 1203 - 0.584372
STY3160 L-arabinose isomerasechromosome CDS3032758 1416 - 0.524011
STY3231 putative membrane proteinchromosome CDS3097596 675 + 0.6
STY3232 possible ABC-transport protein, ATP-binding componentchromosome CDS3098252 684 + 0.559942
STY3233 possible ABC-transport protein, ATP-binding componentchromosome CDS3098929 657 + 0.595129
STY3244 galactose-proton symport (galactose transporter)chromosome CDS3109024 1395 + 0.551971
STY3268 nucleoside permeasechromosome CDS3127850 1257 + 0.512331
STY3305 hexuronate transporterchromosome CDS3150313 1305 - 0.526437
STY3312 hypothetical proteinchromosome CDS3161255 714 - 0.588235
STY3313 possible ABC-transport protein, periplasmic-binding componentchromosome CDS3161965 1053 - 0.536562
STY3340 possible membrane transport proteinchromosome CDS3182112 1455 + 0.55945
STY3368 putative membrane proteinchromosome CDS3210588 774 + 0.55814
STY3392 conserved hypothetical proteinchromosome CDS3236659 768 - 0.55599
STY3404 possible drug efflux proteinchromosome CDS3249773 969 + 0.524252
STY3493 putative membrane proteinchromosome CDS3334497 978 + 0.554192
STY3519 putative sialic acid transporterchromosome CDS3361024 1491 - 0.549966
STY3536 possible membrane transport proteinchromosome CDS3377394 1353 - 0.513673
STY3607 magnesium and cobalt transport proteinchromosome CDS3460368 951 - 0.536278
STY3615 putative membrane proteinchromosome CDS3469681 354 + 0.502825
STY3616 CyaY proteinchromosome CDS3470104 321 + 0.554517
STY3641 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (guanosine pentaphosphatase)chromosome CDS3498321 1482 + 0.555331
STY3760 catalase (hydroperoxidase I)chromosome CDS3621018 2181 - 0.578175
STY3808 periplasmic sulphate binding proteinchromosome CDS3670951 990 - 0.524242
STY3810 putative transmembrane efflux proteinchromosome CDS3673291 897 - 0.526198
STY3811 extracytoplasmic stress protein for protein-mediated toxicitieschromosome CDS3674335 501 - 0.506986
STY3816 manganese superoxide dismutasechromosome CDS3678271 621 - 0.539452
STY3862 conserved hypothetical proteinchromosome CDS3719625 693 + 0.393939
STY3898 membrane transport proteinchromosome CDS3757761 1869 - 0.53237
STY3926 periplasmic phosphate-binding proteinchromosome CDS3789843 1041 + 0.538905
STY3927 phosphate transport system permease proteinchromosome CDS3791019 960 + 0.552083
STY3928 phosphate transport system permease proteinchromosome CDS3791978 891 + 0.560045
STY3929 phosphate transport ATP-binding proteinchromosome CDS3792955 774 + 0.520672
STY3930 phosphate transport system regulatory proteinchromosome CDS3793743 726 + 0.557851
STY3936 putative membrane transport proteinchromosome CDS3799204 1188 - 0.553872
STY3946 putative membrane transport proteinchromosome CDS3813583 1263 - 0.476643
STY3981 multidrug resistance protein Dchromosome CDS3847855 1185 - 0.583122
STY4092 putative secreted proteinchromosome CDS3951821 432 + 0.497685
STY4169 dipeptide transport system permease protein DppBchromosome CDS4028942 1020 + 0.568627
STY4170 dipeptide transport system permease protein DppCchromosome CDS4029971 903 + 0.601329
STY4171 dipeptide transport ATP-binding protein DppDchromosome CDS4030884 984 + 0.559959
STY4194 hypothetical metabolite transport proteinchromosome CDS4059043 1323 - 0.582766
STY4214 putative low-affinity inorganic phosphate transporterchromosome CDS4080174 1497 - 0.537074
STY4222 putative membrane proteinchromosome CDS4087158 1293 - 0.481052
STY4230 putative membrane proteinchromosome CDS4096560 1218 + 0.592775
STY4235 heavy metal-transporting ATPasechromosome CDS4101355 2199 - 0.602547
STY4406 putative membrane proteinchromosome CDS4274669 1632 + 0.560662
STY4467 putative sodium/hydrogen exchanger family proteinchromosome CDS4352725 1692 + 0.556147
STY4475 cytochrome c552 precursorchromosome CDS4361222 1437 + 0.545581
STY4478 cytochrome c-type biogenesis proteinchromosome CDS4364001 957 + 0.588297
STY4488 conserved hypothetical proteinchromosome CDS4375285 336 - 0.497024
STY4489 ProP; putative proline/betaine transporterchromosome CDS4376088 1503 + 0.529607
STY4771 putative sugar transporterchromosome CDS4631069 1209 - 0.473118
STY4782 putative membrane proteinchromosome CDS4641054 777 + 0.563707
STY4872 putative membrane proteinchromosome CDS4733220 1185 - 0.562025
STY4874 putative sugar transport proteinchromosome CDS4735982 1242 - 0.572464
amtB probable ammonium transporterchromosome CDS513755 1287 + 0.557887
bcr bicyclomycin resistance proteinchromosome CDS2288870 1191 - 0.538203
bfr bacterioferritinchromosome CDS4231652 477 + 0.425577
btuF cobalamin periplasmic binding proteinchromosome CDS238277 801 - 0.555556
cbiN putative cobalt transport protein CbiNchromosome CDS2059418 282 - 0.5
cbiO putative cobalt transport ATP-binding protein CbiOchromosome CDS2057930 816 - 0.523284
cbiQ putative cobalt transport protein CbiQchromosome CDS2058754 678 - 0.538348
citA citrate-proton symporterchromosome CDS727357 1305 - 0.54023
citT citrate carrierchromosome CDS665734 1506 - 0.537185
corA putative magnesium and cobalt transport proteinpHCM1 CDS2694 951 - 0.525762
corB putative membrane proteinchromosome CDS2735495 1242 + 0.529791
cutA periplasmic divalent cation tolerance protein CutAchromosome CDS4545555 348 - 0.522988
cysC adenosine 5-phosphosulfate kinasechromosome CDS2921921 606 - 0.541254
cysN ATP sulfurylase (ATP:sulfate adenyltransferase) subunitchromosome CDS2922513 1440 - 0.547917
cysQ cysQ proteinchromosome CDS4620142 741 + 0.566802
feoA putative ferrous iron transport proteinchromosome CDS4166474 228 - 0.504386
feoB ferrous iron transport protein Bchromosome CDS4164137 2319 - 0.564899
glpE conserved hypothetical proteinchromosome CDS4148814 327 + 0.547401
hpaX putative 4-hydroxyphenylacetate permeasechromosome CDS1104125 1377 + 0.532317
iroD putative ferric enterochelin esterasechromosome CDS2774411 1245 + 0.617671
iroN TonB-dependent outer membrane siderophore receptor proteinchromosome CDS2776664 2181 - 0.508482
kefB glutathione-regulated potassium-efflux system protein (K(+)/H(+)antiporter)chromosome CDS4220489 1806 + 0.549834
mdfA multidrug translocase MdfAchromosome CDS892908 1233 + 0.549067
merC putative mercury transport proteinpHCM1 CDS173721 423 - 0.65721
merP putative mercuric transport protein periplasmic binding proteinpHCM1 CDS174179 276 - 0.623188
merP putative mercuric transport protein periplasmic binding proteinpHCM1 CDS115439 276 + 0.619565
mgtA Mg(2+) transport ATPase, P-typechromosome CDS4655766 2709 + 0.550757
mgtB Magnesium transport ATPase, P-type 2chromosome CDS3884528 2727 + 0.525119
mntH manganese transport protein MntHchromosome CDS2484329 1242 - 0.550725
nirC putative nitrite transporterchromosome CDS4202176 810 - 0.560494
nirD nitrite reductase (NAD(P)H) small subunitchromosome CDS4203167 327 - 0.565749
pgtC phosphoglycerate transport regulatory protein PgtC precursorchromosome CDS2470438 1194 - 0.539364
phnS probable periplasmic binding component of 2-aminoethylphosphonate transporterchromosome CDS474347 1014 - 0.563116
rfc O-antigen polymerasechromosome CDS1701377 1224 + 0.33415
sfbA lipoproteinchromosome CDS564336 831 + 0.530686
sfbB ABC transporter ATP-binding proteinchromosome CDS565203 1017 + 0.561455
sfbC ABC transporter integral membrane proteinchromosome CDS566212 660 + 0.542424
sitA Iron transport protein, periplasmic-binding proteinchromosome CDS2859262 918 + 0.538126
sitB Iron transport protein, ATP-binding componentchromosome CDS2860176 822 + 0.540146
sitC Iron transport protein, inner membrane componentchromosome CDS2860994 861 + 0.5482
sitD Iron transport protein, inner membrane componentchromosome CDS2861845 849 + 0.507656
smvA methyl viologen resistance protein SmvAchromosome CDS1447243 1488 + 0.579301
sugE SugE proteinchromosome CDS4557993 318 + 0.531447
tcfA putative fimbrial proteinchromosome CDS351764 711 + 0.488045
tetA tetracycline resistance proteinpHCM1 CDS177935 1206 - 0.433665
trkA potassium transport proteinchromosome CDS4248355 1377 - 0.511983
trkH trk system potassium uptake proteinchromosome CDS3424379 1452 - 0.533058
ttrC tetrathionate reductase subunit C (membrane protein)chromosome CDS1656231 1023 + 0.557185
ybgR probable cation transport proteinchromosome CDS796053 939 - 0.548456
ybiR putative membrane proteinchromosome CDS867253 1113 + 0.543576
ycaD probable transport proteinchromosome CDS960124 1149 + 0.516971
ygcZ probable glucarate transporterchromosome CDS2968776 1359 - 0.518028
yheA bacterioferritin-associated ferredoxinchromosome CDS4231386 195 + 0.420513
yheL conserved hypothetical proteinchromosome CDS4226381 288 + 0.527778
yheM conserved hypothetical proteinchromosome CDS4226017 357 + 0.537815
yheN conserved hypothetical proteinchromosome CDS4225631 387 + 0.573643
yhfC putative membrane proteinchromosome CDS4206350 1182 - 0.547377
yhjA probable cytochrome c peroxidasechromosome CDS3828729 1401 + 0.483226
yliC hypothetical ABC transporter permease proteinchromosome CDS883938 921 + 0.547231
yliD hypothetical ABC transporter permease proteinchromosome CDS884861 912 + 0.555921
zur zinc uptake regulation proteinchromosome CDS4306924 516 - 0.562016