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2024-05-14 19:37:31

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome

Number of genes found: 147

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Saccharophagus degradans 2-40, 2-40
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Sde_2665 Heat shock protein HslUchromosome CDS3380498 1161 - 0.472007
NA Sde_0756 conserved hypothetical proteinchromosome CDS975634 423 + 0.482269
NA Sde_0077 hypothetical proteinchromosome CDS98054 882 + 0.469388
NA Sde_1363 regulatory protein, LacIchromosome CDS1763868 1323 + 0.501134
NA Sde_0678 conserved hypothetical proteinchromosome CDS863183 585 + 0.490598
NA Sde_2233 Nitrate transport ATP-binding subunits C and Dchromosome CDS2837334 708 - 0.464689
NA Sde_0222 Dual specificity protein phosphatasechromosome CDS282846 507 + 0.485207
NA Sde_0883 Bvg accessory factorchromosome CDS1141596 291 + 0.453608
NA Sde_1871 cytochrome C-type biogenesis protein CcmFchromosome CDS2360769 2028 + 0.473866
NA Sde_0043 putative cytochrome oxidase assembly proteinchromosome CDS48155 1185 + 0.475105
NA Sde_1536 Fibronectin, type IIIchromosome CDS1980897 2694 + 0.42242
NA Sde_3748 regulatory protein, ArsRchromosome CDS4747108 1272 + 0.498428
NA Sde_1943 conserved hypothetical proteinchromosome CDS2445251 705 - 0.419858
NA Sde_3588 peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome CDS4547916 732 - 0.474044
NA Sde_3731 protease DOchromosome CDS4730041 1431 - 0.501048
NA Sde_1870 Cysteinyl-tRNA synthetase, class Iachromosome CDS2360306 474 + 0.491561
NA Sde_1180 RecJ exonucleasechromosome CDS1521678 483 - 0.418219
NA Sde_0568 Alpha amylase, catalytic subdomainchromosome CDS702571 624 + 0.459936
NA Sde_3655 thioredoxinchromosome CDS4636158 327 + 0.434251
NA Sde_3093 Trypsin-like serine proteases typically periplasmicchromosome CDS3945583 1407 - 0.46553
NA Sde_2733 dnaK proteinchromosome CDS3462095 1932 - 0.457039
NA Sde_0406 DNA repair proteinchromosome CDS502403 1365 + 0.552381
NA Sde_1608 Endopeptidase Clpchromosome CDS2067298 639 + 0.455399
NA Sde_3604 conserved hypothetical proteinchromosome CDS4564876 2322 - 0.481481
NA Sde_1862 Protein-methionine-S-oxide reductasechromosome CDS2354630 648 + 0.462963
NA Sde_2009 conserved hypothetical proteinchromosome CDS2529689 612 - 0.454248
NA Sde_0188 Urease, alpha subunitchromosome CDS237775 882 + 0.412698
NA Sde_2741 ssrA-binding protein (Small protein B)chromosome CDS3470304 489 + 0.484663
NA Sde_1828 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)chromosome CDS2321161 378 + 0.388889
NA Sde_2099 heat shock protein HSP90chromosome CDS2682122 1908 - 0.446017
NA Sde_1181 thiol:disulfide interchange protein DsbDchromosome CDS1522189 1887 - 0.445681
NA Sde_2602 (Protein-PII) uridylyltransferasechromosome CDS3299450 2703 + 0.483907
NA Sde_1867 UDP-2,3-diacylglucosamine hydrolasechromosome CDS2358470 720 + 0.479167
NA Sde_1691 Flavodoxin, long chainchromosome CDS2161392 732 - 0.497268
NA Sde_2637 Cell wall hydrolase/autolysinchromosome CDS3337591 279 + 0.458781
NA Sde_3167 DEAD/DEAH box helicase-likechromosome CDS4043505 1155 + 0.511688
NA Sde_2430 response regulator receiver domain protein (CheY-like)chromosome CDS3075552 603 - 0.45937
NA Sde_1552 thiol peroxidasechromosome CDS1997574 507 - 0.473373
NA Sde_1566 conserved hypothetical proteinchromosome CDS2009849 519 - 0.418112
NA Sde_2720 cell division protein FtsHchromosome CDS3447442 1926 - 0.490654
NA Sde_0185 putative competence protein ComMchromosome CDS234416 594 - 0.542088
NA Sde_2047 hypothetical proteinchromosome CDS2583223 870 - 0.416092
NA Sde_2016 Cell surface receptor IPT/TIGchromosome CDS2539292 1098 - 0.428051
NA Sde_2548 ClpB proteinchromosome CDS3231880 2631 - 0.477385
NA Sde_2732 dnaJ proteinchromosome CDS3460815 1125 - 0.497778
NA Sde_0884 chaperonin, 60 kDachromosome CDS1141943 1644 + 0.46837
NA Sde_0253 Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family-likechromosome CDS316464 840 - 0.454762
NA Sde_1201 metal dependent phosphohydrolasechromosome CDS1546076 786 - 0.479644
NA Sde_2698 heat shock protein HslUchromosome CDS3424365 1317 + 0.457099
NA Sde_1907 DnaJ-domain containing proteinchromosome CDS2409285 888 + 0.459459
NA Sde_2247 ATPasechromosome CDS2854507 1395 - 0.484588
NA Sde_0796 serine protease, subtilase familychromosome CDS1029791 1203 + 0.407315
NA Sde_2711 conserved hypothetical xanthine dehydrogenase accessory factorchromosome CDS3439836 1005 + 0.491542
NA Sde_0720 Anthranilate phosphoribosyl transferasechromosome CDS931225 1026 + 0.534113
NA Sde_1427 GMP synthase-likechromosome CDS1845726 573 - 0.439791
NA Sde_2526 putative radical activating enzymechromosome CDS3199086 651 - 0.502304
NA Sde_1639 hypothetical proteinchromosome CDS2103526 561 - 0.488414
NA Sde_2920 Fibro-slimechromosome CDS3704150 648 - 0.529321
NA Sde_1692 thioredoxin reductase 1chromosome CDS2162255 945 - 0.485714
NA Sde_1905 hypothetical proteinchromosome CDS2406705 558 + 0.476703
NA Sde_2271 hypothetical proteinchromosome CDS2886051 1431 + 0.433962
NA Sde_2664 protease subunit HflCchromosome CDS3379620 876 - 0.474886
NA Sde_1540 ATP-dependent helicase HrpBchromosome CDS1986830 366 - 0.445355
NA Sde_1331 putative thioredoxinchromosome CDS1725484 858 + 0.4662
NA Sde_0218 urease accessory protein Dchromosome CDS279049 888 + 0.492117
NA Sde_0223 urease accessory protein UreFchromosome CDS283384 666 + 0.45045
NA Sde_3979 Glucose-inhibited division protein A subfamilychromosome CDS5009922 699 + 0.454936
NA Sde_1823 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)chromosome CDS2316032 378 + 0.388889
NA Sde_0362 Glutathione S-transferase-likechromosome CDS448189 678 + 0.482301
NA Sde_1250 Protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS1600482 672 + 0.511905
NA Sde_0536 Cellulose-binding, family IIchromosome CDS657248 522 - 0.48659
NA Sde_2035 conserved hypothetical proteinchromosome CDS2563309 426 - 0.401408
NA Sde_3160 Glutamyl-tRNA(Gln) amidotransferase C subunitchromosome CDS4036541 636 - 0.424528
NA Sde_2855 Helix-turn-helix, AraC typechromosome CDS3610554 396 + 0.530303
NA Sde_1607 Ankyrinchromosome CDS2065583 1335 + 0.448689
NA Sde_1612 Peptidase M20D, amidohydrolasechromosome CDS2072736 1866 + 0.44105
NA Sde_0486 response regulator receiver (CheY-like) modulated CheW proteinchromosome CDS598656 531 - 0.489642
NA Sde_1555 peptidyl-prolyl cis-trans isomerase FklBchromosome CDS1999787 624 - 0.503205
NA Sde_3528 glutathione S-transferasechromosome CDS4482289 633 + 0.492891
NA Sde_3827 putative glutathione S-transferasechromosome CDS4826695 627 + 0.500797
NA Sde_1714 peptidyl-prolyl cis-trans isomerase Achromosome CDS2188851 570 - 0.426316
NA Sde_2931 Glutathione peroxidasechromosome CDS3722689 480 - 0.447917
NA Sde_3151 conserved hypothetical proteinchromosome CDS4026552 1995 + 0.474185
NA Sde_3626 heat shock protein HSP33chromosome CDS4598646 894 + 0.46085
NA Sde_1155 regulatory protein, MarRchromosome CDS1491242 249 + 0.445783
NA Sde_1901 transcriptional regulator, MerR familychromosome CDS2401862 492 - 0.414634
NA Sde_2438 glutaredoxin-related proteinchromosome CDS3083954 333 - 0.471471
NA Sde_3430 putative glutathione S-transferasechromosome CDS4368116 657 + 0.429224
NA Sde_2564 Ribosomal protein S2chromosome CDS3253712 456 - 0.480263
NA Sde_2048 tRNA pseudouridine synthasechromosome CDS2584100 795 - 0.381132
NA Sde_0224 urease accessory protein UreGchromosome CDS284061 624 + 0.429487
NA Sde_3551 thiol:disulfide interchange protein DsbE, putativechromosome CDS4513937 522 + 0.469349
NA Sde_2811 alkyl hydroperoxide reductase, F subunitchromosome CDS3547392 1617 + 0.469388
NA Sde_1872 Heat shock protein DnaJ-likechromosome CDS2362811 543 + 0.46593
NA Sde_0090 Peptidase C60, sortase A and Bchromosome CDS111429 558 - 0.480287
NA Sde_0215 ComM-related proteinchromosome CDS274693 855 - 0.51462
NA Sde_1860 Aconitate hydratase 2chromosome CDS2352022 708 - 0.457627
NA Sde_2837 molecular chaperone (small heat shock protein)chromosome CDS3584833 483 - 0.451346
NA Sde_2263 response regulator receiver domain protein (CheY-like)chromosome CDS2872665 648 + 0.432099
NA Sde_1660 putative bacterioferritin comigratory proteinchromosome CDS2128360 477 + 0.412998
NA Sde_2979 glutathione S-transferasechromosome CDS3785987 636 - 0.444969
NA Sde_0814 C-type cytochrome biogenesis proteinchromosome CDS1059935 1794 - 0.491081
NA Sde_1877 cytochrome C-type biogenesis protein CcmHchromosome CDS2368062 444 + 0.459459
NA Sde_2575 Molybdopterin cofactor biosynthesis MoaC regionchromosome CDS3269531 258 - 0.44186
NA Sde_1165 Protein-methionine-S-oxide reductasechromosome CDS1501384 405 + 0.511111
NA Sde_0800 N-acetyl-gamma-glutamyl-phosphate reductasechromosome CDS1043696 573 - 0.474695
NA Sde_1246 TonB-dependent receptorchromosome CDS1597645 303 + 0.432343
NA Sde_0739 L-ribulokinasechromosome CDS953369 1293 - 0.501934
NA Sde_0567 Glucan 1,4-alpha-glucosidasechromosome CDS700283 2091 + 0.493544
NA Sde_3325 SelT/selW/selH selenoproteinchromosome CDS4253976 1263 - 0.451306
NA Sde_1690 Arginyltransferasechromosome CDS2160656 711 - 0.452883
NA Sde_1208 thiol:disulfide interchange protein DsbCchromosome CDS1551628 795 + 0.47673
NA Sde_2752 putative ATP-dependent Lon proteasechromosome CDS3482579 2049 - 0.498292
NA Sde_0389 Glutamate-ammonia-ligase adenylyltransferasechromosome CDS480101 2940 - 0.526871
NA Sde_3585 disulfide bond formation protein Bchromosome CDS4545585 501 + 0.516966
NA Sde_1740 hypothetical proteinchromosome CDS2216113 2622 + 0.455378
NA Sde_0336 Thiamine biosynthesis protein ThiCchromosome CDS420793 273 - 0.465201
NA Sde_0759 putative ATPasechromosome CDS977922 1494 + 0.502008
NA Sde_1068 TonB-dependent receptorchromosome CDS1369174 489 + 0.431493
NA Sde_1777 Lipoprotein releasing system, ATP-binding proteinchromosome CDS2267852 273 + 0.490842
NA Sde_0299 hypothetical proteinchromosome CDS370030 1734 + 0.538062
NA Sde_2982 conserved hypothetical proteinchromosome CDS3787932 525 - 0.424762
NA Sde_0275 ATPasechromosome CDS339858 1152 + 0.444444
NA Sde_1600 Aminodeoxychorismate lyasechromosome CDS2056591 510 + 0.443137
NA Sde_1834 Cytochrome c-type biogenesis protein CcmBchromosome CDS2329000 513 + 0.393762
NA Sde_3142 phosphatase kdsCchromosome CDS4017246 903 - 0.483942
NA Sde_0496 glutaredoxinchromosome CDS609061 255 + 0.494118
NA Sde_0897 Translation elongation factor Gchromosome CDS1160074 1833 - 0.479542
NA Sde_3206 glutathione S-transferase, putativechromosome CDS4082419 618 + 0.477346
NA Sde_3877 conserved hypothetical proteinchromosome CDS4888610 726 - 0.493113
NA Sde_1937 conserved hypothetical proteinchromosome CDS2442163 648 + 0.447531
NA Sde_2836 putative heat shock proteinchromosome CDS3584123 594 - 0.444444
NA Sde_1049 Elongation factor Pchromosome CDS1342732 1299 + 0.449577
NA Sde_3533 conserved hypothetical proteinchromosome CDS4489031 951 + 0.465825
NA Sde_3694 peptidyl-prolyl cis-trans isomerase FkpA, FKBP-typechromosome CDS4679919 429 - 0.459207
NA Sde_1622 putative peptidasechromosome CDS2086468 990 + 0.481818
NA Sde_1609 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome CDS2068121 1296 + 0.459105
NA Sde_1868 heme exporter protein CcmCchromosome CDS2359237 741 + 0.492578
NA Sde_2697 Dihydrodipicolinate reductasechromosome CDS3423713 540 + 0.511111
NA Sde_2810 alkyl hydroperoxide reductase, C subunitchromosome CDS3546753 567 + 0.465608
NA Sde_2734 GrpE proteinchromosome CDS3464197 585 - 0.499145
NA Sde_1610 Endopeptidase Lachromosome CDS2069588 2418 + 0.459471
NA Sde_2576 Molybdopterin converting factor, subunit 1chromosome CDS3270047 1512 + 0.492063
NA Sde_3358 conserved hypothetical proteinchromosome CDS4286252 321 - 0.498442
NA Sde_3433 glutathione S-transferase family proteinchromosome CDS4370416 645 + 0.43876
NA Sde_1687 protein of unknown function DUF104chromosome CDS2155032 2286 + 0.494751
NA Sde_3185 Protein-methionine-S-oxide reductasechromosome CDS4059931 576 - 0.480903