Gene list
Applied filters:
COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome
Number of genes found: 125
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Frankia sp. CcI3, CcI3 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Francci3_1204 | trigger factor | chromosome | CDS | 1436871 | 1452 | + | 0.702479 |
NA | Francci3_2034 | Protein-L-isoaspartate(D-aspartate)O-methyltrans ferase | chromosome | CDS | 2394076 | 1227 | - | 0.674817 |
NA | Francci3_0632 | chaperonin Cpn10 | chromosome | CDS | 715256 | 306 | + | 0.660131 |
NA | Francci3_2774 | Endopeptidase Clp | chromosome | CDS | 3270536 | 717 | - | 0.680614 |
NA | Francci3_4490 | hypothetical protein | chromosome | CDS | 5362755 | 438 | + | 0.648402 |
NA | Francci3_3053 | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen | chromosome | CDS | 3619491 | 459 | - | 0.653595 |
NA | Francci3_1206 | Endopeptidase Clp | chromosome | CDS | 1439356 | 681 | + | 0.647577 |
NA | Francci3_3895 | peptide methionine sulfoxide reductase | chromosome | CDS | 4657697 | 702 | - | 0.700855 |
NA | Francci3_4537 | thioredoxin | chromosome | CDS | 5421632 | 327 | + | 0.626911 |
NA | Francci3_4398 | chaperonin GroEL | chromosome | CDS | 5256902 | 1623 | + | 0.671596 |
NA | Francci3_4352 | Chaperone DnaK | chromosome | CDS | 5197168 | 1851 | + | 0.678552 |
NA | Francci3_4477 | HesB/YadR/YfhF | chromosome | CDS | 5349179 | 621 | - | 0.714976 |
NA | Francci3_1947 | hydrogenase expression/formation protein HypD | chromosome | CDS | 2287714 | 1209 | + | 0.690653 |
NA | Francci3_0511 | cytochrome c biogenesis protein, transmembrane region | chromosome | CDS | 596025 | 936 | + | 0.736111 |
NA | Francci3_1070 | hydrogenase expression/formation protein HypD | chromosome | CDS | 1274289 | 1107 | - | 0.710027 |
NA | Francci3_2172 | GrpE protein | chromosome | CDS | 2544489 | 675 | - | 0.758519 |
NA | Francci3_4467 | Protein-L-isoaspartate(D-aspartate)O-methyltrans ferase | chromosome | CDS | 5339193 | 1203 | + | 0.720698 |
NA | Francci3_0557 | peptidase M48, Ste24p | chromosome | CDS | 648954 | 873 | + | 0.657503 |
NA | Francci3_0339 | heat shock protein DnaJ-like | chromosome | CDS | 392906 | 591 | - | 0.739425 |
NA | Francci3_0510 | putative secreted protein | chromosome | CDS | 595361 | 630 | + | 0.71746 |
NA | Francci3_2942 | ADP-ribosylation/Crystallin J1 | chromosome | CDS | 3475595 | 900 | + | 0.732222 |
NA | Francci3_1663 | FeS assembly ATPase SufC | chromosome | CDS | 1997507 | 795 | + | 0.684277 |
NA | Francci3_2627 | 20S proteasome, A and B subunits | chromosome | CDS | 3100245 | 915 | - | 0.68306 |
NA | Francci3_3900 | protein of unknown function DUF255 | chromosome | CDS | 4664721 | 2022 | - | 0.732443 |
NA | Francci3_2906 | hypothetical protein | chromosome | CDS | 3421833 | 624 | - | 0.661859 |
NA | Francci3_2175 | chaperonin GroEL | chromosome | CDS | 2548390 | 1626 | + | 0.661132 |
NA | Francci3_4354 | chaperone DnaJ-like | chromosome | CDS | 5199933 | 1191 | + | 0.720403 |
NA | Francci3_0921 | chaperonin Cpn10 | chromosome | CDS | 1064675 | 441 | + | 0.69161 |
NA | Francci3_4465 | OsmC-like protein | chromosome | CDS | 5337374 | 747 | - | 0.702811 |
NA | Francci3_0831 | putative urease accessory protein | chromosome | CDS | 970416 | 798 | - | 0.755639 |
NA | Francci3_3969 | glycosyl transferase, family 39 | chromosome | CDS | 4748950 | 1710 | + | 0.718713 |
NA | Francci3_1943 | nitrogen-fixing NifU-like | chromosome | CDS | 2283285 | 576 | + | 0.739583 |
NA | Francci3_1653 | cytochrome oxidase assembly | chromosome | CDS | 1986856 | 1029 | - | 0.735666 |
NA | Francci3_1526 | ATPase | chromosome | CDS | 1827916 | 1311 | + | 0.709382 |
NA | Francci3_3531 | hypothetical protein | chromosome | CDS | 4219563 | 1284 | + | 0.709502 |
NA | Francci3_1071 | hydrogenase assembly chaperone hypC/hupF | chromosome | CDS | 1275392 | 282 | - | 0.691489 |
NA | Francci3_3585 | Mg chelatase-related protein | chromosome | CDS | 4285320 | 1536 | - | 0.723958 |
NA | Francci3_2630 | Vesicle-fusing ATPase | chromosome | CDS | 3103680 | 1809 | - | 0.645661 |
NA | Francci3_2611 | peptidylprolyl isomerase, FKBP-type | chromosome | CDS | 3081834 | 708 | - | 0.764124 |
NA | Francci3_2789 | ATPase AAA-2 | chromosome | CDS | 3282367 | 2643 | + | 0.710935 |
NA | Francci3_3945 | peptidase S8 and S53, subtilisin, kexin, sedolisin | chromosome | CDS | 4722728 | 1344 | + | 0.752232 |
NA | Francci3_0028 | OsmC-like protein | chromosome | CDS | 34525 | 429 | - | 0.675991 |
NA | Francci3_3683 | thioredoxin-related | chromosome | CDS | 4419288 | 990 | - | 0.747475 |
NA | Francci3_0830 | putative urease accessory protein | chromosome | CDS | 969314 | 960 | - | 0.726042 |
NA | Francci3_4356 | ATPase AAA-2 | chromosome | CDS | 5201861 | 2610 | + | 0.711877 |
NA | Francci3_2626 | 20S proteasome, A and B subunits | chromosome | CDS | 3099521 | 717 | - | 0.684798 |
NA | Francci3_2663 | urease accessory protein UreG | chromosome | CDS | 3143701 | 750 | + | 0.708 |
NA | Francci3_3316 | protein-L-isoaspartate(D-aspartate)O-methyltrans ferase | chromosome | CDS | 3930523 | 1296 | - | 0.67284 |
NA | Francci3_3144 | Glutamate-ammonia-ligase adenylyltransferase | chromosome | CDS | 3718202 | 3204 | - | 0.751248 |
NA | Francci3_1351 | protein of unknown function DUF107 | chromosome | CDS | 1624948 | 435 | + | 0.689655 |
NA | Francci3_3406 | AAA ATPase, central region | chromosome | CDS | 4040632 | 1338 | + | 0.713004 |
NA | Francci3_4536 | thioredoxin reductase | chromosome | CDS | 5420431 | 1047 | + | 0.690544 |
NA | Francci3_4418 | hypothetical protein | chromosome | CDS | 5283656 | 906 | - | 0.728477 |
NA | Francci3_3210 | peptidase A24A, prepilin type IV | chromosome | CDS | 3802872 | 657 | - | 0.750381 |
NA | Francci3_2171 | heat shock protein DnaJ-like | chromosome | CDS | 2543475 | 1008 | - | 0.749008 |
NA | Francci3_1948 | Hydrogenase expression/formation protein HypE | chromosome | CDS | 2288912 | 1080 | + | 0.70463 |
NA | Francci3_1660 | FeS assembly protein SufB | chromosome | CDS | 1994453 | 1413 | + | 0.666667 |
NA | Francci3_0254 | peptidase M48, Ste24p | chromosome | CDS | 293551 | 1224 | - | 0.736928 |
NA | Francci3_3001 | hypothetical protein | chromosome | CDS | 3555292 | 663 | - | 0.71644 |
NA | Francci3_2230 | peptidase M48, Ste24p | chromosome | CDS | 2602266 | 969 | + | 0.72033 |
NA | Francci3_1381 | peptidyl-prolyl cis-trans isomerase, cyclophilin type | chromosome | CDS | 1660019 | 879 | - | 0.713311 |
NA | Francci3_0069 | peptidase S1 and S6, chymotrypsin/Hap | chromosome | CDS | 86820 | 1740 | - | 0.698851 |
NA | Francci3_3672 | hypothetical protein | chromosome | CDS | 4400225 | 3564 | - | 0.753648 |
NA | Francci3_3487 | AAA ATPase, central region | chromosome | CDS | 4156839 | 2484 | - | 0.687198 |
NA | Francci3_2268 | Protein-methionine-S-oxide reductase | chromosome | CDS | 2646457 | 420 | - | 0.685714 |
NA | Francci3_0627 | peptidase M22, glycoprotease | chromosome | CDS | 711715 | 765 | + | 0.750327 |
NA | Francci3_2173 | Chaperone DnaK | chromosome | CDS | 2545187 | 1926 | - | 0.699896 |
NA | Francci3_1649 | protoheme IX farnesyltransferase | chromosome | CDS | 1983653 | 870 | + | 0.694253 |
NA | Francci3_1069 | Hydrogenase expression/formation protein HypE | chromosome | CDS | 1273235 | 1062 | - | 0.755179 |
NA | Francci3_3380 | conserved hypothetical protein | chromosome | CDS | 4010461 | 639 | + | 0.710485 |
NA | Francci3_1042 | Endopeptidase La | chromosome | CDS | 1238126 | 801 | - | 0.746567 |
NA | Francci3_3050 | hypothetical protein | chromosome | CDS | 3616307 | 1314 | + | 0.681126 |
NA | Francci3_1205 | Endopeptidase Clp | chromosome | CDS | 1438658 | 642 | + | 0.657321 |
NA | Francci3_2855 | Polyketide synthesis cyclase | chromosome | CDS | 3364932 | 390 | - | 0.625641 |
NA | Francci3_1352 | band 7 protein | chromosome | CDS | 1625510 | 945 | + | 0.689947 |
NA | Francci3_0801 | SsrA-binding protein | chromosome | CDS | 932973 | 480 | + | 0.683333 |
NA | Francci3_1207 | ATP-dependent Clp protease, ATP-binding subunit ClpX | chromosome | CDS | 1440399 | 1287 | + | 0.639472 |
NA | Francci3_0530 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | chromosome | CDS | 615191 | 966 | - | 0.698758 |
NA | Francci3_4444 | Peptidylprolyl isomerase | chromosome | CDS | 5311812 | 528 | - | 0.666667 |
NA | Francci3_4314 | ATP-dependent metalloprotease FtsH | chromosome | CDS | 5154370 | 2262 | + | 0.678603 |
NA | Francci3_3741 | Leucyltransferase | chromosome | CDS | 4477932 | 786 | + | 0.731552 |
NA | Francci3_2662 | metalloendopeptidase, putative, glycoprotease family | chromosome | CDS | 3142594 | 1071 | + | 0.747899 |
NA | Francci3_0447 | thioredoxin-related | chromosome | CDS | 528774 | 441 | + | 0.696145 |
NA | Francci3_0513 | cytochrome c assembly protein | chromosome | CDS | 599071 | 1194 | + | 0.713568 |
NA | Francci3_0633 | chaperonin GroEL | chromosome | CDS | 715686 | 1641 | + | 0.687995 |
NA | Francci3_3673 | Heat shock protein 70 | chromosome | CDS | 4404196 | 1671 | - | 0.690604 |
NA | Francci3_3244 | protein-L-isoaspartate(D-aspartate)O-methyltrans ferase | chromosome | CDS | 3838808 | 1068 | + | 0.692884 |
NA | Francci3_2773 | Endopeptidase Clp | chromosome | CDS | 3269865 | 675 | - | 0.660741 |
NA | Francci3_3793 | Glutaredoxin-like protein GlrX | chromosome | CDS | 4545923 | 240 | + | 0.591667 |
NA | Francci3_1047 | Endopeptidase La | chromosome | CDS | 1241014 | 390 | - | 0.728205 |
NA | Francci3_2513 | chaperonin GroEL | chromosome | CDS | 2969278 | 1650 | - | 0.667879 |
NA | Francci3_1819 | Protein-L-isoaspartate(D-aspartate)O-methyltrans ferase | chromosome | CDS | 2154800 | 1233 | + | 0.709651 |
NA | Francci3_4292 | Colicin V production protein | chromosome | CDS | 5122032 | 1185 | + | 0.705485 |
NA | Francci3_1059 | Glutathione peroxidase | chromosome | CDS | 1261160 | 537 | + | 0.648045 |
NA | Francci3_1072 | (NiFe) hydrogenase maturation protein HypF | chromosome | CDS | 1275677 | 2547 | - | 0.755791 |
NA | Francci3_0913 | DSBA oxidoreductase | chromosome | CDS | 1056755 | 813 | - | 0.693727 |
NA | Francci3_1128 | Protein-L-isoaspartate(D-aspartate)O-methyltrans ferase | chromosome | CDS | 1344035 | 1167 | - | 0.712939 |
NA | Francci3_1265 | Chaperone DnaJ | chromosome | CDS | 1511373 | 1140 | + | 0.718421 |
NA | Francci3_3674 | hypothetical protein | chromosome | CDS | 4405907 | 1380 | - | 0.725362 |
NA | Francci3_2174 | heat shock protein Hsp20 | chromosome | CDS | 2547669 | 510 | + | 0.67451 |
NA | Francci3_1938 | hydrogenase accessory protein HypB | chromosome | CDS | 2277083 | 852 | + | 0.700704 |
NA | Francci3_0512 | ResB-like | chromosome | CDS | 596957 | 2115 | + | 0.711584 |
NA | Francci3_4258 | DNA repair protein RadA | chromosome | CDS | 5079510 | 1458 | + | 0.727709 |
NA | Francci3_1920 | heat shock protein Hsp20 | chromosome | CDS | 2257111 | 489 | + | 0.674847 |
NA | Francci3_4158 | transcriptional regulator, XRE family | chromosome | CDS | 4959583 | 1212 | - | 0.603135 |
NA | Francci3_0092 | conserved hypothetical protein | chromosome | CDS | 110569 | 3609 | - | 0.74813 |
NA | Francci3_3830 | peptidase S1 and S6, chymotrypsin/Hap | chromosome | CDS | 4591139 | 1548 | - | 0.74031 |
NA | Francci3_0243 | heat shock protein Hsp90 | chromosome | CDS | 281268 | 1953 | + | 0.665643 |
NA | Francci3_0896 | conserved hypothetical protein | chromosome | CDS | 1038263 | 798 | + | 0.718045 |
NA | Francci3_0295 | heat shock protein DnaJ-like | chromosome | CDS | 342024 | 1155 | - | 0.715151 |
NA | Francci3_4383 | ATPase AAA-2 | chromosome | CDS | 5232309 | 2505 | + | 0.673852 |
NA | Francci3_1661 | FeS assembly protein SufD | chromosome | CDS | 1995865 | 1260 | + | 0.734921 |
NA | Francci3_1988 | peptidase S1 and S6, chymotrypsin/Hap | chromosome | CDS | 2334887 | 1044 | + | 0.704023 |
NA | Francci3_1753 | Radical SAM | chromosome | CDS | 2084720 | 756 | - | 0.68254 |
NA | Francci3_4353 | GrpE protein | chromosome | CDS | 5199015 | 816 | + | 0.738971 |
NA | Francci3_3924 | peptidase S49 | chromosome | CDS | 4692124 | 2049 | - | 0.733041 |
NA | Francci3_0912 | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen | chromosome | CDS | 1056109 | 492 | - | 0.678862 |
NA | Francci3_0420 | UTP-GlnB (protein PII) uridylyltransferase, GlnD | chromosome | CDS | 498762 | 2358 | - | 0.733673 |
NA | Francci3_1946 | hydrogenase assembly chaperone hypC/hupF | chromosome | CDS | 2287415 | 303 | + | 0.69637 |
NA | Francci3_0483 | glutaredoxin 2 | chromosome | CDS | 565223 | 312 | + | 0.727564 |
NA | Francci3_2392 | protein of unknown function DUF182 | chromosome | CDS | 2770221 | 1278 | - | 0.742567 |
NA | Francci3_1079 | hydrogenase accessory protein HypB | chromosome | CDS | 1284931 | 894 | + | 0.715884 |
NA | Francci3_1945 | (NiFe) hydrogenase maturation protein HypF | chromosome | CDS | 2284957 | 2451 | + | 0.74337 |
NA | Francci3_3863 | peptidase S1 and S6, chymotrypsin/Hap | chromosome | CDS | 4625704 | 1005 | - | 0.742289 |
NA | Francci3_1179 | heat shock protein Hsp20 | chromosome | CDS | 1410574 | 588 | + | 0.722789 |