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2024-05-17 20:05:07

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome

Number of genes found: 174

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pirellula sp., 1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RB2645 conserved hypothetical protein-putative radical activating enzymechromosome CDS1373182 774 + 0.573643
NA RB6761 conserved hypothetical protein-putative peroxiredoxinchromosome CDS3594163 597 + 0.576214
NA RB7297 conserved hypothetical proteinchromosome CDS3877465 609 + 0.535304
NA RB2784 hypothetical protein-putative transmembrane proteinchromosome CDS1447454 612 - 0.581699
NA RB4756 hypothetical proteinchromosome CDS2437784 270 + 0.507407
NA RB2849 probable thioredoxinchromosome CDS1480307 627 - 0.527911
NA RB9273 similar to dihydrolipoamide acetyltransferasechromosome CDS4957465 558 + 0.507168
NA RB8450 conserved hypothetical proteinchromosome CDS4514838 1887 + 0.550079
NA RB10641 probable beta-subunit of geranylgeranyltransferase or farnesyltransferasechromosome CDS5775513 930 - 0.589247
NA RB10909 hypothetical protein-transmembrane predictionchromosome CDS5920575 804 + 0.56592
NA RB13090 probable monooxygenasechromosome CDS7022518 1125 - 0.560889
NA RB4763 similar to thiol-disulfide interchange protein dsbDchromosome CDS2441926 588 - 0.52381
NA RB5697 probable thiol-disulfide interchange proteinchromosome CDS2973214 1383 + 0.524946
NA RB2966 cell division protein FtsHchromosome CDS1527063 2019 + 0.545815
NA RB7731 hypothetical proteinchromosome CDS4140162 327 - 0.501529
NA RB6911 hypothetical protein-signal peptide and transmembrane predictionchromosome CDS3671445 1293 + 0.563032
NA RB12541 probable thioredoxinchromosome CDS6756939 1476 + 0.552168
NA RB9844 hypothetical protein-putative transmembrane proteinchromosome CDS5301844 954 + 0.563941
NA RB1728 conserved hypothetical protein-putative integraal membrane proteinchromosome CDS899954 858 + 0.553613
NA RB12178 similar to LfgA (potential lateral flagellar protein similar to FlgA)chromosome CDS6568324 1434 - 0.559275
NA RB10887 carbamyltransferase BlmDchromosome CDS5909943 1830 - 0.544809
NA RB9084 glycoprotein endopeptidasechromosome CDS4852354 1077 + 0.583101
NA RB8615 probable thioredoxin related protein ykvVchromosome CDS4595974 2367 + 0.566962
NA RB2426 conserved hypothetical proteinchromosome CDS1261010 1731 - 0.54015
NA RB13193 AAA superfamily ATPasechromosome CDS7083676 987 - 0.526849
NA RB1936 similar to thioredoxin H-typechromosome CDS1019641 3060 + 0.533987
NA RB9354 conserved hypothetical proteinchromosome CDS5011855 552 + 0.547101
NA RB5645 serine proteasechromosome CDS2943152 1671 - 0.546379
NA RB4792 similar to clpB proteinchromosome CDS2454360 639 + 0.519562
NA RB5753 bacterioferritin comigratory proteinchromosome CDS3004163 483 + 0.509317
NA RB11248 similar to protein-S-isoprenylcysteine O-methyltransferasechromosome CDS6100290 963 - 0.582555
NA RB7911 probable secreted proteinasechromosome CDS4225623 1227 - 0.571312
NA RB2244 glutathione peroxidasechromosome CDS1178675 579 + 0.544041
NA RB1903 similar to NrfA-putative nitrite reduction proteinchromosome CDS990721 1443 + 0.541234
NA RB10413 conserved hypothetical protein-putative protease of the subtilase familychromosome CDS5630383 4059 - 0.551614
NA RB1359 probable serine protease do-like DEGPchromosome CDS693488 1890 + 0.567725
NA RB841 subtilisinchromosome CDS442147 2508 - 0.5937
NA RB4182 hypothetical protein-signal peptide predictionchromosome CDS2150524 1350 + 0.564444
NA RB11879 probable periplasmic serine proteinasechromosome CDS6397196 1377 - 0.542484
NA RB13290 hypothetical protein-transmembrane predictionchromosome CDS7123968 648 + 0.501543
NA RB5051 conserved hypothetical protein-putative thioredoxin reductasechromosome CDS2597495 1131 - 0.55084
NA RB7868 conserved hypothetical protein-putative secreted proteinchromosome CDS4204869 702 - 0.554131
NA RB11706 periplasmic serine proteinase Dochromosome CDS6311407 1527 + 0.573019
NA RB4011 hypothetical protein-transmembrane predictionchromosome CDS2070828 834 - 0.532374
NA RB3174 ribosomal large subunit pseudouridine synthase Bchromosome CDS1634867 1188 - 0.590909
NA RB8140 conserved hypothetical proteinchromosome CDS4352189 1743 - 0.543316
NA RB344 probable xanthan lyasechromosome CDS171693 2103 - 0.563005
NA RB12946 hypothetical proteinchromosome CDS6969668 735 + 0.540136
NA RB7102 conserved hypothetical proteinchromosome CDS3773179 942 - 0.515924
NA RB5025 similar to cysteine proteinasechromosome CDS2581935 1518 + 0.525033
NA RB4294 probable cysteine proteinasechromosome CDS2212149 921 - 0.534202
NA RB5241 hypothetical proteinchromosome CDS2698715 660 + 0.556061
NA RB8280 hypothetical proteinchromosome CDS4425318 390 + 0.510256
NA RB5869 probable bacterioferritin comigratory protein (Bcp)chromosome CDS3077796 774 - 0.533592
NA RB9995 conserved hypothetical protein-putative iron-regulated ABC transporterchromosome CDS5383639 1407 - 0.547974
NA RB1048 hypothetical protein-signal peptide predictionchromosome CDS546640 1227 + 0.494703
NA RB9766 putative ATPasechromosome CDS5263361 1023 - 0.513196
NA RB2856 hypothetical proteinchromosome CDS1484442 3234 - 0.564317
NA RB10734 hypothetical protein-signal peptide predictionchromosome CDS5833947 834 + 0.519185
NA RB34 hypothetical proteinchromosome CDS15692 792 - 0.550505
NA RB10357 hypothetical protein-transmembrane predictionchromosome CDS5598846 606 + 0.554455
NA RB11934 conserved hypothetical protein-possibly uncharacterized protein required for cytochrome oxidase assemblychromosome CDS6425493 1071 - 0.586368
NA RB10364 conserved hypothetical protein-putative ATPase with chaperone activitychromosome CDS5601572 1191 + 0.530647
NA RB2785 conserved hypothetical proteinchromosome CDS1448062 2313 - 0.577605
NA RB8674 probable thioredoxinchromosome CDS4615595 1977 + 0.561963
NA RB9955 hypothetical protein-putative conserved hypothetical proteinchromosome CDS5362247 1359 - 0.558499
NA RB6075 putative secreted proteinchromosome CDS3188548 1563 + 0.588612
NA RB12362 peroxiredoxinchromosome CDS6652962 825 - 0.535758
NA RB3446 peptidyl-prolyl cis-trans isomerase cyp2chromosome CDS1780781 1536 - 0.550781
NA RB4061 probable type 4 prepilin-like proteins leader peptide processing enzymechromosome CDS2095498 1467 + 0.559646
NA RB9998 probable ABC-type transporter ATP-binding proteinchromosome CDS5385104 834 - 0.561151
NA RB6384 probable thioredoxin related proteinchromosome CDS3356942 1356 - 0.530973
NA RB6633 hypothetical proteinchromosome CDS3525143 600 + 0.551667
NA RB6669 conserved hypothetical proteinchromosome CDS3543307 5355 + 0.560784
NA RB4954 conserved hypothetical protein-putative thioredoxinchromosome CDS2547861 501 + 0.54491
NA RB7406 hypothetical protein-signal peptide and transmembrane predictionchromosome CDS3960764 393 - 0.53944
NA RB3913 collagenasechromosome CDS2020731 2703 + 0.570847
NA RB3716 conserved hypothetical proteinchromosome CDS1924959 420 - 0.566667
NA RB12080 protein-L-isoaspartate O-methyltransferasechromosome CDS6515753 1479 - 0.577417
NA RB7104 conserved hypothetical proteinchromosome CDS3774053 1032 - 0.555233
NA RB8843 probable stage V sporulation protein K-putative ATPase of the AAA familychromosome CDS4705018 1833 + 0.585379
NA RB3376 hypothetical protein-signal peptide and transmembrane predictionchromosome CDS1740244 2073 + 0.551375
NA RB7673 conserved hypothetical protein-putative periplasmatic serine proteasechromosome CDS4119234 1575 - 0.554921
NA RB5205 probable peptidyl-prolyl cis-trans isomerasechromosome CDS2684362 1881 + 0.527911
NA RB1252 conserved hypothetical proteinchromosome CDS638429 1998 + 0.552052
NA RB3379 conserved hypothetical proteinchromosome CDS1742301 3099 - 0.535334
NA RB9992 conserved hypothetical protein-putative iron-regulated ABC transporterchromosome CDS5382085 1461 - 0.572211
NA RB10789 conserved hypothetical protein-putative alkyl hydroperoxide reductasechromosome CDS5859980 594 - 0.563973
NA RB9029 probable zinc metalloproteinasechromosome CDS4810823 2280 + 0.539912
NA RB9164 conserved hypothetical protein-putative thiol-disulfide isomerase or thioredoxinchromosome CDS4901660 1794 - 0.555184
NA RB4901 hypothetical protein-transmembrane predictionchromosome CDS2520103 639 - 0.558685
NA RB3305 hypothetical protein-putative transmembrane proteinchromosome CDS1695825 1434 + 0.577406
NA RB8093 hypothetical protein-signal peptide and transmembrane predictionchromosome CDS4334451 1191 - 0.523929
NA RB9463 conserved hypothetical proteinchromosome CDS5079098 1887 + 0.561738
NA RB13062 hypothetical protein-signal peptide and transmembrane predictionchromosome CDS7009944 426 + 0.556338
NA RB9491 hypothetical protein-signal peptide and transmembrane predictionchromosome CDS5096385 267 + 0.543071
NA RB8494 prepilin peptidase, type IVchromosome CDS4531481 1374 - 0.544396
NA RB13186 putative subtilisin proteinase-like proteinchromosome CDS7079642 2319 - 0.542044
NA RB1279 probable peptidyl-prolyl cis-trans isomerase, FkbP-typechromosome CDS653260 438 + 0.557078
NA RB11217 probable dinitrogenase reductase activating glycohydrolase (draG)chromosome CDS6081958 1065 - 0.560563
NA RB7208 hypothetical proteinchromosome CDS3822824 537 + 0.497207
NA RB393 similar to peptidasechromosome CDS205043 1965 - 0.547074
NA RB259 hypothetical proteinchromosome CDS131782 555 - 0.576577
NA RB4606 probable protein disulfide-isomerasechromosome CDS2359956 636 - 0.551887
NA RB2066 probable serine proteasechromosome CDS1085462 1131 + 0.584439
NA RB4272 hypothetical proteinchromosome CDS2190545 1326 - 0.515083
PCP RB3898 pyrrolidone-carboxylate peptidasechromosome CDS2015236 732 - 0.57377
TPX RB4586 probable thiol peroxidasechromosome CDS2350844 519 - 0.527938
ate1 RB10567 arginyl-tRNA-protein transferase-related proteinchromosome CDS5734191 804 - 0.564677
ccsA RB8604 probable cytochrome c-type biogenesis proteinchromosome CDS4590203 3684 + 0.564061
clpB RB9103 ClpB proteinchromosome CDS4863850 2700 - 0.541481
clpC RB6751 negative regulator of genetic competence ClpC/MecBchromosome CDS3586111 2580 + 0.546124
clpP RB10826 ATP-dependent clp protease proteolytic subunitchromosome CDS5879229 684 + 0.532164
clpP RB10829 ATP-dependent clp protease proteolytic subunitchromosome CDS5879971 588 + 0.55102
clpX RB9927 ATP-dependent Clp protease ATP-binding subunit clpXchromosome CDS5347256 1401 - 0.54818
comM RB9808 comM proteinchromosome CDS5281208 1542 + 0.577173
cpaA RB5170 similar to type IV prepilin peptidase CpaAchromosome CDS2658816 558 + 0.532258
cyoE RB11931 protoheme IX farnesyltransferasechromosome CDS6424310 1170 - 0.595726
cypH RB8649 peptidylprolyl isomerasechromosome CDS4607622 624 + 0.536859
degP RB7368 serine proteinase, HtrA/DegQ/DegS familychromosome CDS3943271 1134 + 0.571429
degP RB12752 serine proteinasechromosome CDS6871994 1530 + 0.569935
degP RB2062 probable serine protease DO-likechromosome CDS1084162 1317 + 0.579347
degP RB7367 periplasmic serine proteinase DOchromosome CDS3941421 1908 + 0.552411
degP RB7371 HtrA [similar to serine proteases, trypsin family]chromosome CDS3944401 2070 + 0.568599
degP RB6490 protease Do-like (S2 serine-type protease)chromosome CDS3435918 1200 - 0.560833
dipZ RB6813 DipZ protein, thioredoxin related to cytochrome cchromosome CDS3619749 1167 - 0.547558
dnaJ RB8972 chaperone protein DnaJchromosome CDS4781697 1176 + 0.585884
dnaJ RB10242 DnaJ1 proteinchromosome CDS5535126 993 - 0.574018
dnaK RB5755 probable chaperone protein DnaKchromosome CDS3006427 2967 + 0.565554
dnaK RB2429 chaperone protein HscCchromosome CDS1263537 1764 - 0.566327
dnaK RB5754 probable chaperone protein DnaKchromosome CDS3004578 1938 + 0.568627
dnaK RB9105 DnaK proteinchromosome CDS4866720 2115 - 0.549409
dsbB RB11876 thiol:disulfide interchange protein dsbD [precursor]chromosome CDS6392375 2742 + 0.556528
dsbD RB13184 probable thiol:disulfide interchange proteinchromosome CDS7078691 624 - 0.552885
dys1 RB1381 similar to deoxyhypusine synthase (Dhs)chromosome CDS705784 1113 + 0.549865
fixW RB9386 probable FixW proteinchromosome CDS5033729 1209 - 0.533499
fkpA RB3240 FKBP-type peptidyl-prolyl cis-trans isomerase fkpAchromosome CDS1665040 600 + 0.548333
fkpA RB342 FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS170094 573 + 0.574171
fliJ RB12499 similar to flagellar FliJ proteinchromosome CDS6728739 483 - 0.559006
fliS RB3750 similar to flagellar protein FliSchromosome CDS1938427 492 + 0.567073
ftsH RB5566 cell division protein FtsHchromosome CDS2895383 2187 - 0.554641
ftsH RB5871 cell division protein FtsH homologchromosome CDS3078660 1458 - 0.526063
ftsH RB3314 probable cell division protein FtsHchromosome CDS1702618 585 - 0.57094
glnD RB2974 uridylyltransferase/uridylyl-removing enzyme glnDchromosome CDS1532322 2652 - 0.567496
glnE RB6825 glutamate-ammonia-ligase adenylyltransferasechromosome CDS3626621 3486 + 0.554217
groEL RB10629 heat shock protein GroELchromosome CDS5769500 1620 + 0.558642
groEL RB8966 60 kDa chaperoninchromosome CDS4777493 1983 + 0.580938
groEL RB8970 60 kDa chaperonin 5chromosome CDS4779905 1623 + 0.567468
groES RB10627 GroES/HSP10 homologchromosome CDS5769148 282 + 0.592199
groES RB8969 10 kDa chaperoninchromosome CDS4779554 306 + 0.555556
groS RB281 probable GroES chaperoninchromosome CDS139597 330 - 0.539394
grpE RB8974 molecular chaperone GrpEchromosome CDS4782869 603 + 0.583748
hsp20 RB10283 heat shock protein SP21chromosome CDS5557737 324 + 0.533951
hsp20 RB10279 heat shock protein, HSP20 familychromosome CDS5557118 456 + 0.541667
htrA RB9382 probable serine protease do-like [Precursor]chromosome CDS5029471 1389 + 0.572354
mip RB10129 macrophage infectivity potentiatorchromosome CDS5466713 717 - 0.529986
msrA RB11847 peptide methionine sulfoxide reductasechromosome CDS6379337 732 + 0.528689
msrA RB11878 putative methionine sulfoxide reductasechromosome CDS6396598 507 + 0.564103
msrB RB2268 peptide methionine sulfoxide reductasechromosome CDS1190541 849 - 0.541814
msrB RB7900 probable peptide methionine sulfoxide reductase msrBchromosome CDS4220692 585 - 0.528205
mucD RB9222 probable MucD-putative a secreted serine proteinasechromosome CDS4932617 1428 + 0.564426
ppiB RB7244 peptidylprolyl isomerasechromosome CDS3849148 432 - 0.530093
ppiC RB8476 peptidyl-prolyl cis-trans isomerase C2chromosome CDS4524113 282 - 0.539007
ppiD RB6620 probable peptidyl-prolyl cis-trans isomerasechromosome CDS3518213 1188 - 0.554714
prdX2 RB8238 peroxiredoxin 2chromosome CDS4403997 597 + 0.551089
smpB RB4867 ssrA-binding proteinchromosome CDS2495722 633 - 0.540284
sppA RB1371 proteinase IV homolog yteIchromosome CDS700085 1407 - 0.56361
tig RB5681 trigger factorchromosome CDS2965080 1764 + 0.527778
trx RB7223 thioredoxin reductasechromosome CDS3832051 1134 + 0.568783
trx RB5782 probable thioredoxinchromosome CDS3030299 1521 - 0.573307
trx RB5897 probable protein disulfide-isomerasechromosome CDS3090681 1134 - 0.544974
trxA RB10378 thioredoxinchromosome CDS5610063 435 - 0.567816
trxA RB12160 thioredoxin 1chromosome CDS6562778 327 - 0.519878
trxB RB1488 putative thioredoxin reductasechromosome CDS764421 1764 + 0.553855