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2024-05-19 16:26:12

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome

Number of genes found: 122

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Idiomarina loihiensis L2TR, L2TR
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA IL0537 Possible regulatory protein containing AAA-type ATPase domainchromosome CDS566156 1614 + 0.437423
NA IL1831 Inactive metal-dependent protease-like proteinchromosome CDS1963355 684 - 0.495614
NA IL2496 Predicted protein-S-isoprenylcysteine methyltransferasechromosome CDS2674996 462 + 0.467532
NA IL2069 Thioredoxin related proteinchromosome CDS2205304 339 - 0.486726
NA IL2345 Uncharacterized conserved secreted proteinchromosome CDS2517601 504 - 0.46627
NA IL0080 OsmC-like organic hydroperoxide reductasechromosome CDS86848 420 - 0.488095
NA IL1722 DnaJ-related proteinchromosome CDS1854074 603 - 0.427861
NA IL0583 Oar-like outer membrane protein protein, OmpA familychromosome CDS620693 3198 + 0.465291
NA IL0991 Zn-dependent peptidase, insulinase familychromosome CDS1048737 2724 + 0.455213
NA IL2342 Peroxiredoxin, AhpC/Tsa familychromosome CDS2512878 630 + 0.473016
NA IL0213 Thiol:disulfide interchange proteinchromosome CDS232897 2085 - 0.516067
NA IL0212 Thioredoxin related proteinchromosome CDS232383 525 - 0.525714
NA IL0146 Membrane protease, stomatin/prohibitin familychromosome CDS156051 915 + 0.454645
NA IL1970 Probable O-sialoglycoprotein endopeptidasechromosome CDS2102114 1035 - 0.501449
NA IL0831 Predicted glutathione S-transferasechromosome CDS887577 963 - 0.462098
NA IL0672 Probable arginyl-tRNA:protein arginylyltransferasechromosome CDS727255 729 + 0.449931
NA IL1229 Membrane associated glutaredoxinchromosome CDS1324796 747 + 0.471218
NA IL2238 Predicted molecular chaperonechromosome CDS2394020 1110 + 0.492793
NA IL0161 Secreted subtilisin-like peptidasechromosome CDS169042 2535 + 0.476923
NA IL0719 Glutathione S-transferase related proteinchromosome CDS776916 639 - 0.464789
NA IL1994 Thioredoxin domain-containing proteinchromosome CDS2129032 852 + 0.450704
NA IL1264 SelR-like methionine sulfoxide reductasechromosome CDS1354424 402 + 0.452736
NA IL0248 hypothetical proteinchromosome CDS262065 579 + 0.488774
NA IL1464 Thioredoxin related proteinchromosome CDS1576209 450 - 0.493333
NA IL1804 Glutaredoxin-related proteinchromosome CDS1938311 339 - 0.477876
NA IL0498 Predicted aspartyl proteasechromosome CDS523629 423 - 0.465721
NA IL0243 Prolyl 4-hydroxylase alpha subunit homolog, 2OG-Fe(II) oxygenase familychromosome CDS258414 618 - 0.5
NA IL0193 Collagenase family proteasechromosome CDS209906 873 + 0.500573
NA IL2314 OsmC-like predicted redox proteinchromosome CDS2479532 432 - 0.497685
NA IL2478 Peroxiredoxin, AhpC/Tsa familychromosome CDS2654650 492 + 0.495935
NA IL0913 Organic radical activating enzymechromosome CDS965040 702 - 0.501424
NA IL0984 Predicted Zn-dependent protease related to HtpXchromosome CDS1040661 837 - 0.498208
NA IL0192 Collagenase family proteasechromosome CDS208908 993 + 0.510574
NA IL0181 Collagenase family proteasechromosome CDS194081 1299 - 0.498845
NA IL1525 Two domain methionine sulfoxide reductase (MsrA/SelR)chromosome CDS1638571 1113 + 0.469901
NA IL1001 Periplasmic parvulin-like peptidyl-prolyl isomerasechromosome CDS1066086 1869 - 0.441413
NA IL0162 Secreted subtilisin-like peptidasechromosome CDS171664 1851 - 0.524581
NA IL2586 Glutathione S-transferase related proteinchromosome CDS2780082 573 - 0.450262
NA IL2576 Peroxiredoxin, AhpC/Tsa familychromosome CDS2767756 546 - 0.474359
NA IL0211 Protein-disulfide isomerasechromosome CDS231622 732 - 0.441257
NA IL0187 Radical enzyme activating proteinchromosome CDS202584 474 + 0.514768
NA IL0689 Glutaredoxin family proteinchromosome CDS744240 384 - 0.429688
NA IL0623 Glutathione S-transferase related proteinchromosome CDS680232 666 - 0.495495
NA IL1098 TPR-containg proteinchromosome CDS1181970 1209 - 0.46981
NA IL1984 Uncharacterized conserved proteinchromosome CDS2116158 273 + 0.450549
NA IL1283 Thioredoxin related proteinchromosome CDS1379368 240 + 0.466667
aat IL0671 Leu/Phe-tRNA-protein transferasechromosome CDS726545 711 + 0.466948
ahpC IL1803 Peroxiredoxin, AhpC/Tsa familychromosome CDS1937546 606 - 0.452145
bcp IL1461 Peroxiredoxin, bacterioferritin comigratory proteinchromosome CDS1573048 471 + 0.428875
ccmA IL1106 ABC-type transport system involved in cytochrome c biogenesis, ATPase componentchromosome CDS1188237 657 - 0.506849
ccmB IL1105 ABC-type transport system involved in cytochrome c biogenesis, permease componentchromosome CDS1187557 684 - 0.502924
ccmC IL1104 ABC-type transport system involved in cytochrome c biogenesis, permease componentchromosome CDS1186818 738 - 0.48103
ccmE IL1102 Cytochrome c-type biogenesis protein CcmEchromosome CDS1186122 483 - 0.465839
ccmF IL1101 Cytochrome c biogenesis factorchromosome CDS1184170 1956 - 0.505112
ccmH IL1099 Cytochrome c-type biogenesis protein CcmHchromosome CDS1183171 462 - 0.454545
ccoN IL1297 Cbb3-type cytochrome oxidase, subunit 1chromosome CDS1395658 1437 + 0.464161
clpA IL0674 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperoneschromosome CDS728281 2271 - 0.470718
clpB IL1181 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperoneschromosome CDS1269520 2574 - 0.473582
clpP IL1005 Protease subunit of ATP-dependent Clp proteasechromosome CDS1072432 621 - 0.463768
clpX IL1004 ATP-dependent protease Clp, ATPase subunitchromosome CDS1071132 1272 - 0.446541
comM IL0215 Competence related ATPase with chaperone activitychromosome CDS235592 1548 + 0.501938
coxG IL0258 Cytochrome c oxidase assembly proteinchromosome CDS271505 570 - 0.473684
ctaA IL0254 Uncharacterized protein required for cytochrome oxidase assemblychromosome CDS268114 990 - 0.487879
cyoE IL0253 Polyprenyltransferasechromosome CDS267204 897 - 0.507246
degQ IL0411 Periplasmic trypsin-like serine proteasechromosome CDS426230 1356 - 0.487463
degS IL0410 Periplasmic trypsin-like serine proteasechromosome CDS425117 1050 - 0.466667
djlA IL2226 DnaJ-domain containing proteinchromosome CDS2379897 831 - 0.493381
dnaJ IL0985 DnaJ molecular chaperonechromosome CDS1041547 1155 - 0.483983
dnaK IL0986 Molecular chaperone (HSP70)chromosome CDS1042804 1929 - 0.470192
dsbA IL2571 Probable disulfide isomerasechromosome CDS2762636 615 - 0.456911
dsbB IL1822 Disulfide bond formation proteinchromosome CDS1956272 546 + 0.485348
dsbC IL0825 Protein-disulfide isomerasechromosome CDS881542 732 - 0.484973
dsbD IL2283 Thiol:disulfide interchange protein, membrane-associated protein disulphide isomerasechromosome CDS2446074 1707 + 0.480961
dsbE IL1100 Probable disulfide isomerasechromosome CDS1183629 549 - 0.48816
fkpA IL2309 FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS2475651 741 - 0.445344
flgA IL1150 Flagellar basal body P-ring biosynthesis proteinchromosome CDS1230076 723 + 0.455048
flgJ IL1139 Flagellum-specific muramidasechromosome CDS1220474 978 - 0.519427
fliJ IL1196 Flagellar biosynthesis chaperonechromosome CDS1284190 444 - 0.459459
fliS IL1133 Flagellin-specific chaperone FliSchromosome CDS1213041 423 - 0.446809
glnD IL0847 UTP:GlnB (protein PII) uridylyltransferasechromosome CDS903553 2640 + 0.475
glnE IL1959 Glutamine synthetase adenylyltransferasechromosome CDS2087038 2847 - 0.48156
groL IL2280 Chaperonin GroEL (HSP60 family)chromosome CDS2443598 1647 - 0.490589
groS IL2281 Co-chaperonin GroES (HSP10)chromosome CDS2445302 291 - 0.463918
grpE IL0987 Molecular chaperone GrpE (heat shock protein)chromosome CDS1044838 666 - 0.477477
grxA IL1366 Glutaredoxinchromosome CDS1468213 267 + 0.434457
gst IL0046 Glutathione S-transferasechromosome CDS50016 639 - 0.489828
hflB IL0975 Membrane ATP-dependent Zn proteaseschromosome CDS1029748 1947 - 0.475603
hflC IL0336 Membrane protease, stomatin/prohibitin familychromosome CDS345658 894 + 0.449664
hflK IL0335 Membrane protease, stomatin/prohibitin familychromosome CDS344504 1155 + 0.474459
hslO IL2029 Redox-responsive chaperonin Hsp33chromosome CDS2171692 825 + 0.486061
hslU IL2457 ATP-dependent protease HslVU (ClpYQ), ATPase subunitchromosome CDS2630090 1353 - 0.478197
hslV IL2458 ATP-dependent protease HslVU (ClpYQ), peptidase subunitchromosome CDS2631444 558 - 0.503584
htpG IL1846 Molecular chaperone, HSP90 familychromosome CDS1977145 1914 - 0.463427
htpX IL1320 Zn-dependent protease with chaperone functionchromosome CDS1421123 864 - 0.476852
ibpA IL2544 Molecular chaperone (small heat shock protein)chromosome CDS2727518 474 + 0.481013
lon IL1003 ATP-dependent Lon proteasechromosome CDS1068686 2325 - 0.458925
lonB IL1288 ATP-dependent serine protease LAchromosome CDS1384319 1917 - 0.472613
msrA IL2039 Peptide methionine sulfoxide reductasechromosome CDS2181778 546 + 0.468864
osmC IL2550 Organic hydroperoxide reductasechromosome CDS2734382 423 - 0.470449
pcm IL0748 Protein-L-isoaspartatecarboxylmethyltransferasechromosome CDS808325 642 - 0.501558
pepO IL0461 Secreted zinc metalloproteinasechromosome CDS478661 2070 + 0.460386
ppiA IL1866 Peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin familychromosome CDS1994903 591 + 0.433164
ppiB IL1032 Peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin familychromosome CDS1107726 498 - 0.443775
ppiC IL2411 Parvulin-like peptidyl-prolyl isomerasechromosome CDS2585574 279 + 0.473118
ptr IL2336 Secreted Zn-dependent peptidase, insulinase familychromosome CDS2501798 2874 + 0.456855
pulO IL0450 Type II pili prepilin peptidase PilD/XcpAchromosome CDS465413 861 - 0.511034
sirA IL0009 Predicted redox protein, regulator of disulfide bond formationchromosome CDS10684 240 - 0.458333
slpA IL1126 FKBP-type peptidyl-prolyl cis-trans isomeraseschromosome CDS1205790 441 - 0.480726
slyD IL0821 FKBP-type peptidyl-prolyl cis-trans isomeraseschromosome CDS876595 483 + 0.488613
smpB IL0898 TmRNA-binding proteinchromosome CDS954848 480 + 0.477083
sms IL1874 ATP-dependent serine proteasechromosome CDS2003607 1365 - 0.525275
sohB IL1038 Periplasmic serine protease, ClpP familychromosome CDS1114386 999 - 0.418418
sppA IL1329 Periplasmic serine protease, ClpP familychromosome CDS1429654 1851 + 0.450567
sspA IL0419 Glutathione S-transferase related proteinchromosome CDS433284 624 + 0.445513
sufB_1 IL0154 Cysteine desulfurase activator SufBchromosome CDS162762 1437 - 0.488518
sufB_2 IL0152 Cysteine desulfurase activator SufBchromosome CDS160753 1251 - 0.508393
sufC IL0153 Cysteine desulfurase activator ATPasechromosome CDS162000 759 - 0.471673
surA IL2230 Periplasmic parvulin-like peptidyl-prolyl isomerase (two homologous domains)chromosome CDS2384830 1299 + 0.464973
tig IL1006 Trigger factorchromosome CDS1073152 1302 - 0.439324
trxA IL2362 Thioredoxinchromosome CDS2533440 327 - 0.412844
trxB IL0670 Thioredoxin reductasechromosome CDS725576 960 + 0.501042
trxC IL0066 Thioredoxin related proteinchromosome CDS68880 429 + 0.438228