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2024-05-19 09:35:11

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome

Number of genes found: 148

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Methylococcus capsulatus str. Bath, Bath
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA MCA2661 prophage LambdaMc01, peptidase, U7 familychromosome CDS2842178 1227 + 0.693562
NA MCA0853 putative ATP-dependent proteasechromosome CDS899506 2535 - 0.654832
NA MCA0026 putative type III restriction-modification system, R subunitchromosome CDS25693 2649 - 0.639487
NA MCA3111 conserved hypothetical proteinchromosome CDS3301356 444 - 0.594595
NA MCA0856 conserved hypothetical proteinchromosome CDS904186 273 - 0.611722
NA MCA2133 glutaredoxin family proteinchromosome CDS2297773 264 - 0.628788
NA MCA2210 conserved hypothetical proteinchromosome CDS2385383 567 - 0.708995
NA MCA1305 DnaK-related proteinchromosome CDS1392651 1977 + 0.655539
NA MCA0314 putative hflC proteinchromosome CDS309013 963 + 0.64486
NA MCA1023 antioxidant, AhpC/Tsa family proteinchromosome CDS1076157 606 - 0.612211
NA MCA2408 conserved hypothetical proteinchromosome CDS2585844 483 + 0.608696
NA MCA0403 putative suppressor for copper-sensitivity Dchromosome CDS406200 489 + 0.691207
NA MCA2532 heat shock protein, Hsp20 familychromosome CDS2708225 435 - 0.618391
NA MCA0982 heat shock protein, Hsp20 familychromosome CDS1026594 531 + 0.613936
NA MCA2088 conserved hypothetical proteinchromosome CDS2247145 231 - 0.619048
NA MCA1257 resA domain proteinchromosome CDS1338701 498 + 0.638554
NA MCA1730 heat shock protein, Hsp20 familychromosome CDS1848051 450 + 0.588889
NA MCA2020 conserved hypothetical proteinchromosome CDS2168884 558 + 0.629032
NA MCA1396 DnaJ domain proteinchromosome CDS1483434 669 - 0.687593
NA MCA0164 nickel-iron hydrogenase, accessory proteinchromosome CDS174586 579 - 0.671848
NA MCA1725 putative serine proteasechromosome CDS1843589 1125 - 0.633778
NA MCA1467 serine protease, MucDchromosome CDS1557968 1422 - 0.618847
NA MCA1002 glutathione S-transferase domain proteinchromosome CDS1048642 657 - 0.628615
NA MCA0313 putative hflK proteinchromosome CDS308027 990 + 0.632323
NA MCA1478 putative signal peptide peptidase SppAchromosome CDS1571117 984 - 0.630081
NA MCA2286 hypothetical proteinchromosome CDS2482039 600 - 0.616667
NA MCA1599 putative serine protease, MucDchromosome CDS1706633 1515 + 0.662046
NA MCA2477 conserved hypothetical proteinchromosome CDS2655537 2040 - 0.665686
NA MCA1069 conserved hypothetical proteinchromosome CDS1123973 570 + 0.591228
NA MCA2703 serine protease, trypsin familychromosome CDS2887788 897 - 0.587514
NA MCA2787 putative membrane proteinchromosome CDS2978374 1218 - 0.65353
NA MCA0042 antioxidant, AhpC/Tsa familychromosome CDS43745 507 + 0.64497
NA MCA1232 radical activating enzyme family proteinchromosome CDS1298063 648 + 0.652778
NA MCA1778 cytochrome oxidase assembly proteinchromosome CDS1908712 972 + 0.647119
NA MCA2192 dolichyl-phosphate-mannose-protein mannosyltransferase family proteinchromosome CDS2366512 1344 + 0.593006
NA MCA1640 putative nodulation protein nolNOchromosome CDS1745002 1779 + 0.655986
NA MCA0262 ATPase, AAA familychromosome CDS250992 1677 + 0.635063
NA MCA0415 TPR domain proteinchromosome CDS414866 1218 - 0.68555
NA MCA2189 cytochrome c family proteinchromosome CDS2361459 1803 + 0.63117
NA MCA1619 trypsin domain proteinchromosome CDS1725960 537 - 0.711359
NA MCA0073 putative pyruvate formate lyase-activating enzymechromosome CDS75126 1098 + 0.636612
NA MCA1791 conserved hypothetical proteinchromosome CDS1920850 702 - 0.589744
NA MCA1042 thiol:disulfide interchange protein like proteinchromosome CDS1094668 408 + 0.688725
NA MCA2078 glutaredoxin-related proteinchromosome CDS2237391 333 - 0.585586
NA MCA1643 peptidyl-prolyl cis-trans isomerase family proteinchromosome CDS1749200 978 - 0.619632
NA MCA2978 putative lipoproteinchromosome CDS3153707 696 - 0.647988
NA MCA0202 conserved hypothetical proteinchromosome CDS208872 312 - 0.605769
NA MCA1750 OsmC/Ohr family proteinchromosome CDS1866582 417 - 0.601918
NA MCA3112 SPFH domain/Band 7 familychromosome CDS3301796 930 - 0.604301
NA MCA1731 heat shock protein, Hsp20 familychromosome CDS1848521 381 + 0.632546
NA MCA0731 hypothetical proteinchromosome CDS770686 1752 - 0.593607
NA MCA2665 conserved hypothetical proteinchromosome CDS2845105 447 + 0.709172
NA MCA2139 Mg chelatase-related proteinchromosome CDS2301564 1458 + 0.688615
NA MCA1732 heat shock protein, Hsp20 familychromosome CDS1848980 504 + 0.630952
NA MCA2704 serine protease, subtilase familychromosome CDS2888751 1695 - 0.667847
NA MCA2614 thioredoxin family proteinchromosome CDS2802293 816 + 0.660539
NA MCA0664 antioxidant, AhpC/Tsa familychromosome CDS697616 486 - 0.635802
NA MCA0062 protoheme IX farnesyl transferasechromosome CDS63501 897 - 0.641026
NA MCA0538 peptidase, M48 familychromosome CDS553808 1362 - 0.632159
NA MCA0908 ATPase, AAA familychromosome CDS952211 1530 - 0.652288
NA MCA2055 conserved hypothetical proteinchromosome CDS2208843 765 - 0.577778
NA MCA1812 peptidase, U32 familychromosome CDS1945078 1431 + 0.62963
NA MCA0259 glutaredoxin-related proteinchromosome CDS250085 333 + 0.663664
NA MCA2552 PpiC-type peptidylprolyl isomerase domain proteinchromosome CDS2732435 939 - 0.610224
NA MCA1041 thiol:disulfide interchange protein, DsbD familychromosome CDS1092330 2238 + 0.654155
NA MCA0882 putative cytochrome c oxidase assembly proteinchromosome CDS928526 549 + 0.555556
NA MCA1163 putative nodulation protein nolNOchromosome CDS1219794 1755 + 0.638746
NA MCA1544 conserved hypothetical proteinchromosome CDS1645518 237 - 0.687764
NA MCA2600 putative ATP-dependent proteasechromosome CDS2785556 2355 + 0.672611
NA MCA0875 serine protease, subtilase familychromosome CDS921704 1992 + 0.659639
NA MCA1955 putative peptide methionine sulfoxide reductasechromosome CDS2106910 609 - 0.589491
NA MCA0523 putative peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome CDS538995 471 + 0.619958
aat MCA1792 leucyl/phenylalanyl-tRNA--protein transferasechromosome CDS1921575 708 - 0.587571
bsaA MCA0841 glutathione peroxidasechromosome CDS886981 495 - 0.634343
cbpA MCA1727 curved DNA-binding proteinchromosome CDS1845689 927 - 0.652643
ccmA MCA0954 heme exporter protein CcmAchromosome CDS996935 567 - 0.666667
ccmB MCA0953 heme exporter protein CcmBchromosome CDS996082 678 - 0.660767
ccmC MCA0952 heme exporter protein CcmCchromosome CDS995346 732 - 0.603825
ccmE MCA0419 cytochrome c-type biogenesis protein CcmEchromosome CDS419080 462 - 0.616883
ccmF MCA0418 cytochrome c-type biogenesis protein CcmFchromosome CDS417110 1974 - 0.665653
ccmH MCA0416 cytochrome c-type biogenesis protein CcmHchromosome CDS416089 462 - 0.627706
clpA MCA1789 ATP-dependent Clp protease, ATP-binding subunit ClpAchromosome CDS1918320 2271 + 0.594452
clpB MCA3106 ATP-dependent Clp protease, ATP-binding subunit ClpBchromosome CDS3293305 2580 - 0.632171
clpP-1 MCA0242 ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS238108 621 + 0.62963
clpP-2 MCA0529 ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS543746 588 + 0.62415
clpX-1 MCA0243 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome CDS238818 1269 + 0.621749
clpX-2 MCA0530 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome CDS544429 1287 + 0.6115
clpX-3 MCA1829 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome CDS1958646 1335 - 0.653933
cysT MCA1183 sulfate ABC transporter, permease proteinchromosome CDS1237920 837 - 0.671446
djlA MCA0020 DnaJ-like protein DjlAchromosome CDS19221 831 - 0.649819
dnaJ MCA1855 dnaJ proteinchromosome CDS1991986 1134 - 0.634921
dnaK MCA1856 dnaK proteinchromosome CDS1993215 1926 - 0.61215
dsbA MCA2602 thiol:disulfide interchange protein DsbAchromosome CDS2788778 651 - 0.600614
dsbB MCA3059 disulfide bond formation protein Bchromosome CDS3244437 495 + 0.640404
dsbC MCA0575 thiol:disulfide interchange protein DsbCchromosome CDS604619 633 + 0.605055
dsbE-1 MCA0417 thiol:disulfide interchange protein DsbEchromosome CDS416547 567 - 0.62963
dsbE-2 MCA0434 thiol:disulfide interchange protein DsbEchromosome CDS445809 546 + 0.64652
ftsH-1 MCA0851 cell division protein FtsHchromosome CDS896534 1914 - 0.640021
ftsH-2 MCA1848 cell division protein FtsHchromosome CDS1983073 1917 - 0.624413
ftsY MCA0133 cytochrome oxidase assembly family protein/cell division protein FtsYchromosome CDS136994 2016 + 0.683036
gcp MCA2990 O-sialoglycoprotein endopeptidasechromosome CDS3163099 1014 - 0.663708
glnD MCA0565 protein-P-II uridylyltransferasechromosome CDS593310 2634 - 0.637813
glnE MCA2345 glutamate-ammonia-ligase adenylyltransferasechromosome CDS2537102 2847 - 0.614331
groEL-1 MCA0707 chaperonin, 60 kDa subunitchromosome CDS744091 1638 + 0.636752
groEL-2 MCA1202 chaperonin, 60 kDa subunitchromosome CDS1259157 1680 + 0.672619
groEL-3 MCA1704 chaperonin, 60 kDa subunitchromosome CDS1821661 1629 - 0.622468
groES-1 MCA0706 chaperonin, 10 kDa subunitchromosome CDS743738 291 + 0.61512
groES-2 MCA1705 chaperonin, 10 kDa subunitchromosome CDS1823333 291 - 0.56701
grpE MCA1857 GrpE proteinchromosome CDS1995209 558 - 0.641577
gst MCA0074 glutathione S-transferasechromosome CDS76264 612 + 0.622549
gstB MCA1303 glutathione S-transferasechromosome CDS1390735 615 - 0.643902
hflC MCA1980 hflC proteinchromosome CDS2131647 864 - 0.592593
hflK MCA1981 hflK proteinchromosome CDS2132510 1212 - 0.627063
hscA MCA0252 chaperone protein HscAchromosome CDS244889 1860 + 0.676882
hscB MCA0251 co-chaperone Hsc20chromosome CDS244356 534 + 0.616105
hslO MCA2980 33 kda chaperoninchromosome CDS3155284 870 + 0.602299
hslU MCA2015 heat shock protein HslVU, ATPase subunit HslUchromosome CDS2164069 1323 + 0.647014
hslV MCA2014 ATP-dependent protease HslVchromosome CDS2163509 564 + 0.624114
htpG MCA0848 heat shock protein HtpGchromosome CDS893231 1905 - 0.612073
htpX MCA1383 heat shock protein HtpXchromosome CDS1469052 885 - 0.638418
htrA MCA2343 protease DOchromosome CDS2534666 1398 + 0.612303
hypB MCA1602 hydrogenase accessory protein HypBchromosome CDS1708878 852 + 0.664319
hypC MCA1600 hydrogenase assembly chaperone hypC/hupFchromosome CDS1708260 237 + 0.666667
hypD MCA1603 hydrogenase expression/formation protein HypDchromosome CDS1709742 1101 + 0.70663
hypE MCA1676 hydrogenase expression/formation protein HypEchromosome CDS1786202 852 - 0.659624
hypF MCA1604 [NiFe] hydrogenase maturation protein HypFchromosome CDS1710851 2265 + 0.701987
lon MCA0531 ATP-dependent protease Lachromosome CDS545845 2430 + 0.603292
msrA MCA2979 peptide methionine sulfoxide reductasechromosome CDS3154535 669 - 0.648729
pcm-1 MCA1211 protein-L-isoaspartate O-methyltransferasechromosome CDS1274479 660 + 0.657576
pcm-2 MCA2419 protein-L-isoaspartate O-methyltransferasechromosome CDS2595383 660 + 0.695455
pcm-3 MCA2831 protein-L-isoaspartate O-methyltransferasechromosome CDS3019589 699 - 0.668097
pilD MCA2094 leader peptidase PilDchromosome CDS2250563 870 - 0.645977
pmoA MCA1797 methane monooxygenase, A subunitchromosome CDS1927548 744 - 0.596774
pmoA2 MCA2854 methane monooxygenase, A subunitchromosome CDS3048017 744 - 0.598118
ppiB MCA0516 peptidyl-prolyl cis-trans isomerase Bchromosome CDS534781 498 + 0.594378
ppiD MCA0533 peptidyl-prolyl cis-trans isomerse Dchromosome CDS549020 1818 + 0.609461
radA MCA1385 DNA repair protein RadAchromosome CDS1470818 1344 + 0.662946
slyD MCA0081 peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome CDS85182 483 + 0.6294
smpB MCA2620 SsrA-binding proteinchromosome CDS2806860 474 - 0.601266
sspA MCA1959 stringent starvation protein Achromosome CDS2111428 654 - 0.61315
sufB MCA0992 FeS assembly protein SufBchromosome CDS1038135 1446 - 0.628631
sufC MCA0991 FeS assembly ATPase SufCchromosome CDS1037341 765 - 0.648366
sufD MCA0990 FeS assembly protein SufDchromosome CDS1036035 1305 - 0.667433
surA MCA0602 peptidyl-prolyl cis-trans isomerase SurAchromosome CDS636744 1365 + 0.63663
tig MCA0528 trigger factorchromosome CDS542565 1116 + 0.620072
trxA-1 MCA0057 thioredoxinchromosome CDS58769 330 - 0.606061
trxA-2 MCA2134 thioredoxinchromosome CDS2298409 420 + 0.683333
trxB MCA1694 thioredoxin-disulfide reductasechromosome CDS1812382 954 - 0.636268