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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough

Number of genes found: 121

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Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA DVU1404 radical SAM domain proteinSubName: Full=Radical SAM domain protein; chromosome CDS1473006 1107 - 0.627823
NA DVU0654 peptidase, U32 familySubName: Full=Peptidase, U32 family; chromosome CDS726616 1227 - 0.682152
NA DVU2247 antioxidant, AhpC/Tsa familySubName: Full=Antioxidant, AhpC/Tsa family; chromosome CDS2344057 615 - 0.595122
NA DVU1876 dnaJ protein, putativeSubName: Full=DnaJ protein, putative; chromosome CDS1943843 951 - 0.669821
NA DVU2658 conserved hypothetical proteinRecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG synthase; EC=4.3.99.3; AltName: Full=Queuosine biosynthesis protein QueE; chromosome CDS2770670 651 - 0.625192
NA DVU2630 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS2746127 876 + 0.676941
NA DVU2569 peptidyl-prolyl cis-trans isomerase, FKBP-typeRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS2682688 426 + 0.629108
NA DVU2524 cytochrome c3, putativeSubName: Full=Cytochrome c3, putative; chromosome CDS2635568 498 + 0.574297
NA DVU1902 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1976382 939 - 0.654952
NA DVU2441 heat shock protein, Hsp20 familySubName: Full=Heat shock protein, Hsp20 family; chromosome CDS2547504 411 + 0.53528
NA DVU1468 peptidase/PDZ domain proteinSubName: Full=Peptidase/PDZ domain protein; chromosome CDS1548081 1449 - 0.642512
NA DVU2019 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2096176 2070 - 0.557005
NA DVU2170 minor capsid protein CSubName: Full=Minor capsid protein C; chromosome CDS2266987 1221 - 0.658477
NA DVU0263 acidic cytochrome c3SubName: Full=Acidic cytochrome c3; chromosome CDS306015 381 - 0.64042
NA DVU1457 thioredoxin reductase, putativeSubName: Full=Thioredoxin reductase, putative; chromosome CDS1536247 930 - 0.625806
NA DVU1022 SUF system FeS assembly ATPase SufC, putativeSubName: Full=SUF system FeS assembly ATPase SufC, putative; chromosome CDS1125448 777 - 0.620335
NA DVU2407 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2511892 501 - 0.656687
NA DVU1233 protein-P-II uridylyltransferase, putativeRecName: Full=Bifunctional uridylyltransferase/uridylyl-removing enzyme; Short=UTase/UR; AltName: Full=Bifunctional [protein-PII] modification enzyme; AltName: Full=Bifunctional nitrogen sensor protein; chromosome CDS1320326 2721 + 0.641308
NA DVU3362 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3532518 381 + 0.543307
NA DVU1683 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1761202 1737 + 0.582614
NA DVU0514 FlgA family proteinSubName: Full=FlgA family protein; chromosome CDS587379 933 + 0.683816
NA DVU1510 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1582432 564 - 0.441489
NA DVU0913 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1007363 438 - 0.579909
NA DVU0577 formate dehydrogenase formation protein FdhE, putativeSubName: Full=Formate dehydrogenase formation protein FdhE, putative; chromosome CDS641591 882 + 0.633787
NA DVU0657 heat shock protein, Hsp20 familySubName: Full=Heat shock protein, Hsp20 family; chromosome CDS729163 414 + 0.664251
NA DVU1065 peptidyl-prolyl cis-trans isomerse domain proteinSubName: Full=Peptidyl-prolyl cis-trans isomerse domain protein; chromosome CDS1167904 1890 + 0.653968
NA DVU0300 radical SAM domain proteinSubName: Full=Radical SAM domain protein; chromosome CDS347569 738 - 0.623306
NA DVU3314 peptidase, U32 familySubName: Full=Peptidase, U32 family; chromosome CDS3490740 1977 - 0.672736
NA DVU1472 ATP-dependent protease, putativeSubName: Full=ATP-dependent protease, putative; chromosome CDS1552107 2448 + 0.613154
NA DVU2791 cytochrome c family proteinSubName: Full=Cytochrome c family protein; chromosome CDS2893852 780 + 0.629487
NA DVU1586 thioredoxin family proteinSubName: Full=Thioredoxin family protein; chromosome CDS1669924 468 + 0.587607
NA DVU0517 peptidase, M23/M37 familySubName: Full=Peptidase, M23/M37 family; chromosome CDS590194 1833 + 0.704855
NA DVU3320 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS3498575 381 - 0.645669
NA DVU1462 cytochrome c assembly protein, putativeSubName: Full=Cytochrome c assembly protein, putative; chromosome CDS1541371 732 - 0.612022
NA DVU2334 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2429794 285 + 0.621053
NA DVU1901 peptidyl-prolyl cis-trans isomerase domain proteinSubName: Full=Peptidyl-prolyl cis-trans isomerase domain protein; chromosome CDS1975298 1047 - 0.622732
NA DVU3278 peptidase/PDZ domain proteinSubName: Full=Peptidase/PDZ domain protein; chromosome CDS3452517 1557 - 0.679512
NA DVU1191 ATP-dependent protease La, putativeRecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; chromosome CDS1281920 2571 - 0.630105
NA DVUA0030 hypothetical proteinSubName: Full=Uncharacterized protein; pDV CDS33321 702 + 0.636752
NA DVU2494 peptidase, M48 familyRecName: Full=Protease HtpX homolog; EC=3.4.24.-; chromosome CDS2606430 861 + 0.635308
NA DVU0814 bacterioferritin comigratory protein, putativeSubName: Full=Bacterioferritin comigratory protein, putative; chromosome CDS901535 480 - 0.641667
NA DVU0198 minor capsid protein C, degenerateSubName: Full=Minor capsid protein C, degenerate; chromosome CDS244274 1320 + 0.679545
NA DVU1471 heat shock protein, Hsp20 familySubName: Full=Heat shock protein, Hsp20 family; chromosome CDS1551724 369 + 0.623306
NA DVU0702 cytochrome c family proteinSubName: Full=Cytochrome c family protein; chromosome CDS781566 447 + 0.599553
NA DVU0378 thioredoxin, putativeSubName: Full=Thioredoxin, putative; chromosome CDS428443 315 - 0.580952
NA DVU0034 DSBA-like thioredoxin domain proteinSubName: Full=DSBA-like thioredoxin domain protein; chromosome CDS40526 786 + 0.633588
NA DVU3388 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS3562683 828 - 0.64372
NA DVU3077 AhpC/TSA family proteinSubName: Full=AhpC/TSA family protein; chromosome CDS3220001 762 + 0.654856
NA DVU1811 protoheme IX farnesyltransferase, putativeRecName: Full=Protoheme IX farnesyltransferase; EC=2.5.1.-; AltName: Full=Heme B farnesyltransferase; AltName: Full=Heme O synthase; chromosome CDS1875780 864 - 0.619213
NA DVU2825 pyruvate formate-lyase 1 activating enzyme, putativeSubName: Full=Pyruvate formate-lyase 1 activating enzyme, putative; chromosome CDS2933030 924 + 0.642857
NA DVU3125 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS3272173 621 + 0.668277
NA DVU0864 glycoprotease family protein, putativeSubName: Full=Glycoprotease family protein, putative; chromosome CDS956549 786 - 0.685751
NA DVU0283 AhpF family protein/thioredoxin reductaseSubName: Full=AhpF family protein/thioredoxin reductase; chromosome CDS328770 1986 - 0.656596
NA DVU3355 SPFH domain/Band 7 family proteinSubName: Full=SPFH domain/Band 7 family protein; chromosome CDS3526649 756 + 0.600529
NA DVU2810 formate dehydrogenase formation protein FdhE, putativeSubName: Full=Formate dehydrogenase formation protein FdhE, putative; chromosome CDS2912822 834 - 0.659472
NA DVU0684 hflK protein, putativeSubName: Full=HflK protein, putative; chromosome CDS758132 1137 - 0.627089
NA DVU2271 pyruvate formate-lyase activating enzyme, putativeSubName: Full=Pyruvate formate-lyase activating enzyme, putative; chromosome CDS2360039 894 - 0.630872
NA DVU1840 metalloendopeptidase, putative, glycoprotease familyRecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; chromosome CDS1910311 1086 - 0.633518
NA DVU3249 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS3421807 681 + 0.606461
NA DVU0862 flagellar protein FliS/hypothetical protein, fusionSubName: Full=Uncharacterized protein; chromosome CDS953768 906 - 0.674393
NA DVU1003 dnaJ domain proteinSubName: Full=DnaJ domain protein; chromosome CDS1098299 987 + 0.675785
NA DVU3076 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3218992 582 + 0.640893
NA DVU1893 ATP-dependent protease, putativeSubName: Full=ATP-dependent protease, putative; chromosome CDS1965307 2421 + 0.634449
NA DVU0999 thio:disulfide interchange protein, putativeSubName: Full=Thio:disulfide interchange protein, putative; chromosome CDS1093789 2160 + 0.653241
NA DVU0710 competence protein comM, putativeSubName: Full=Competence protein comM, putative; chromosome CDS788925 1665 + 0.681682
NA DVU0683 hflC protein, putativeRecName: Full=Protein HflC; chromosome CDS757279 852 - 0.617371
NA DVU1021 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1124280 1167 - 0.616967
NA DVU2871 minor capsid protein CSubName: Full=Minor capsid protein C; chromosome CDS2965319 1320 - 0.67803
NA DVU1894 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1967938 219 - 0.589041
NA DVU3282 ADP-ribosylglycohydrolase family proteinSubName: Full=ADP-ribosylglycohydrolase family protein; chromosome CDS3457225 900 - 0.656667
NA DVU0725 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS808323 2148 - 0.668063
NA DVU0658 heat shock protein, Hsp20 familySubName: Full=Heat shock protein, Hsp20 family; chromosome CDS729587 462 + 0.67316
NA DVU1290 nitrate reductase, gamma subunit, putativeSubName: Full=Nitrate reductase, gamma subunit, putative; chromosome CDS1384047 1005 - 0.583085
NA DVU2117 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS2212495 567 + 0.633157
NA DVU1552 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1628591 1131 - 0.634836
NA DVU2553 NifU family proteinSubName: Full=NifU family protein; chromosome CDS2665224 246 - 0.621951
NA DVU0151 HAMP domain/sigma-54 interaction domain proteinSubName: Full=HAMP domain/sigma-54 interaction domain protein; chromosome CDS184043 2874 + 0.642658
NA DVU0883 glutaredoxin, putativeSubName: Full=Glutaredoxin, putative; chromosome CDS974481 258 + 0.534884
NA DVU1670 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1749981 639 - 0.602504
NA DVU2687 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2800560 531 + 0.623352
NA DVU1501 ClpP protease family proteinSubName: Full=ClpP protease family protein; chromosome CDS1576227 735 - 0.591837
NA DVU2442 heat shock protein, Hsp20 familySubName: Full=Heat shock protein, Hsp20 family; chromosome CDS2547975 354 + 0.590395
aat DVU1603 leucyl/phenylalanyl-tRNA--protein transferaseRecName: Full=Leucyl/phenylalanyl-tRNA--protein transferase; EC=2.3.2.6; AltName: Full=L/F-transferase; AltName: Full=Leucyltransferase; AltName: Full=Phenyalanyltransferase; chromosome CDS1685506 705 + 0.662411
ccmB DVU1048 cytochrome c-type biogenesis protein CcmBSubName: Full=Cytochrome c-type biogenesis protein CcmB; chromosome CDS1149864 678 - 0.646018
ccmC DVU1047 cytochrome c-type biogenesis protein CcmCSubName: Full=Cytochrome c-type biogenesis protein CcmC; chromosome CDS1149138 675 - 0.65037
ccmE DVU1051 cytochrome c-type biogenesis protein CcmESubName: Full=Cytochrome c-type biogenesis protein CcmE; chromosome CDS1153168 414 - 0.589372
ccmF DVU1050 cytochrome c-type biogenesis protein CcmFSubName: Full=Cytochrome c-type biogenesis protein CcmF; chromosome CDS1151185 1896 - 0.64346
clpA DVU1602 ATP-dependent Clp protease, ATP-binding subunit ClpASubName: Full=ATP-dependent Clp protease, ATP-binding subunit ClpA; chromosome CDS1683179 2331 + 0.64393
clpB DVU1874 ATP-dependent Clp protease, ATP-binding subunit ClpBRecName: Full=Chaperone protein ClpB; chromosome CDS1940871 2598 - 0.635104
clpP DVU1335 ATP-dependent Clp protease, proteolytic subunitRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS1411273 606 + 0.594059
clpX DVU1336 ATP-dependent Clp protease, ATP-binding subunit ClpXRecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; chromosome CDS1411889 1254 + 0.602871
dnaJ DVU3243 dnaJ proteinRecName: Full=Chaperone protein DnaJ; chromosome CDS3413276 1131 + 0.659593
dnaK DVU0811 dnaK proteinRecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; chromosome CDS897365 1911 - 0.646782
ftsH DVU1278 cell division protein FtsHRecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; chromosome CDS1369986 1971 + 0.619483
groEL DVU1976 chaperonin, 60 kDaRecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; chromosome CDS2050958 1644 - 0.618005
groES DVU1977 chaperonin, 10 kDaRecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; chromosome CDS2052641 288 - 0.604167
grpE DVU0812 heat shock protein GrpERecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; chromosome CDS899494 576 - 0.647569
hslU DVU1467 heat shock protein HslVU, ATPase subunit HslURecName: Full=ATP-dependent protease ATPase subunit HslU; AltName: Full=Unfoldase HslU; chromosome CDS1546644 1326 - 0.640271
hslV DVU1577 ATP-dependent protease hslVRecName: Full=ATP-dependent protease subunit HslV; EC=3.4.25.2; chromosome CDS1659214 546 - 0.628205
htpG DVU2643 heat shock protein HtpGRecName: Full=Chaperone protein HtpG; AltName: Full=Heat shock protein HtpG; AltName: Full=High temperature protein G; chromosome CDS2758472 1914 + 0.623824
hypB DVU2329 hydrogenase accessory protein HypBSubName: Full=Hydrogenase accessory protein HypB; chromosome CDS2425178 675 + 0.64
hypC DVU1924 hydrogenase assembly chaperone hypC/hupFSubName: Full=Hydrogenase assembly chaperone hypC/hupF; chromosome CDS1998226 252 + 0.623016
hypD DVU0325 hydrogenase expression/formation protein HypDSubName: Full=Hydrogenase expression/formation protein HypD; chromosome CDS367932 1098 + 0.648452
hypE DVU0326 hydrogenase expression/formation protein HypESubName: Full=Hydrogenase expression/formation protein HypE; chromosome CDS369036 1026 + 0.668616
hypF DVU3067 [NiFe] hydrogenase maturation protein HypFSubName: Full=[NiFe] hydrogenase maturation protein HypF; chromosome CDS3202929 2520 + 0.661111
lon DVU1337 ATP-dependent protease LaRecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; chromosome CDS1413261 2466 + 0.618816
msrA DVU1984 peptide methionine sulfoxide reductase MsrARecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; chromosome CDS2062136 627 + 0.620415
msrB DVU0576 peptide methionine sulfoxide reductase MsrBRecName: Full=Peptide methionine sulfoxide reductase MsrB; EC=1.8.4.12; AltName: Full=Peptide-methionine (R)-S-oxide reductase; chromosome CDS640793 432 - 0.587963
pcm DVU1849 protein-L-isoaspartate O-methyltransferaseRecName: Full=Protein-L-isoaspartate O-methyltransferase; EC=2.1.1.77; AltName: Full=L-isoaspartyl protein carboxyl methyltransferase; AltName: Full=Protein L-isoaspartyl methyltransferase; AltName: Full=Protein-beta-aspartate methyltransferase; Short=PIMT; chromosome CDS1917440 633 - 0.619273
ppiB-1 DVU0284 peptidyl-prolyl cis-trans isomerase BRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS330783 495 + 0.60202
ppiB-2 DVU1873 peptidyl-prolyl cis-trans isomerase BRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS1940074 495 - 0.563636
ppiC DVU1470 peptidyl-prolyl cis-trans isomerase CSubName: Full=Peptidyl-prolyl cis-trans isomerase C; EC=5.2.1.8; chromosome CDS1551307 285 + 0.624561
pppA DVU1263 type IV prepilin-like proteins leader peptidaseRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS1351308 804 + 0.610696
radA DVU1590 DNA repair protein RadARecName: Full=DNA repair protein radA; chromosome CDS1672298 1371 + 0.65062
smpB DVU0828 SsrA-binding proteinRecName: Full=SsrA-binding protein; chromosome CDS918623 465 - 0.630108
sppA DVU3149 signal peptide peptidase SppA, 36K typeSubName: Full=Signal peptide peptidase SppA, 36K type; EC=3.4.-.-; chromosome CDS3300725 891 - 0.635241
tig DVU1334 trigger factorRecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; chromosome CDS1409785 1302 + 0.59831
tpX DVU1228 thiol peroxidaseRecName: Full=Probable thiol peroxidase; EC=1.11.1.-; chromosome CDS1317780 519 - 0.599229
trx DVU1839 thioredoxinRecName: Full=Thioredoxin; chromosome CDS1909875 324 - 0.580247
trxB-1 DVU0377 thioredoxin reductaseSubName: Full=Thioredoxin reductase; EC=1.8.1.9; chromosome CDS427507 918 - 0.639434
trxB-2 DVU1838 thioredoxin-disulfide reductaseSubName: Full=Thioredoxin-disulfide reductase; EC=1.8.1.9; chromosome CDS1908952 924 - 0.607143