Gene list
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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Geobacter sulfurreducens PCA, PCA
Number of genes found: 148
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Geobacter sulfurreducens PCA, PCA | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | GSU2377 | hypothetical protein | chromosome | CDS | 2604759 | 1575 | - | 0.48254 |
NA | GSU1321 | thioredoxin family protein | chromosome | CDS | 1447467 | 507 | + | 0.613412 |
NA | GSU2891 | hypothetical protein | chromosome | CDS | 3176689 | 1278 | - | 0.65493 |
NA | GSU1996 | cytochrome c family protein | chromosome | CDS | 2187920 | 1032 | + | 0.577519 |
NA | GSU2808 | cytochrome c family protein | chromosome | CDS | 3088058 | 570 | + | 0.589474 |
NA | GSU3316 | cytochrome c biogenesis protein, CcmF/CcyK/CcsA family | chromosome | CDS | 3641415 | 720 | + | 0.634722 |
NA | GSU2102 | pyruvate formate-lyase-activating enzyme, putative | chromosome | CDS | 2314210 | 897 | - | 0.682274 |
NA | GSU0318 | peptidase, M48 family | chromosome | CDS | 348883 | 1245 | + | 0.610442 |
NA | GSU2890 | cytochrome c biogenesis protein, CcmF/CcyK/CcsA family | chromosome | CDS | 3175814 | 828 | - | 0.605072 |
NA | GSU0433 | clpB protein, putative | chromosome | CDS | 462307 | 2628 | + | 0.688737 |
NA | GSU3280 | thioredoxin-related protein | chromosome | CDS | 3600112 | 516 | - | 0.554264 |
NA | GSU1054 | conserved hypothetical protein | chromosome | CDS | 1141298 | 258 | - | 0.577519 |
NA | GSU0014 | phage prohead protease, HK97 family/dnaJ domain protein | chromosome | CDS | 22322 | 885 | + | 0.60678 |
NA | GSU3246 | thioredoxin peroxidase | chromosome | CDS | 3559499 | 606 | - | 0.577558 |
NA | GSU2957 | thioredoxin family protein | chromosome | CDS | 3254879 | 378 | + | 0.624339 |
NA | GSU0202 | conserved hypothetical protein | chromosome | CDS | 212880 | 741 | + | 0.68556 |
NA | GSU2675 | hypothetical protein | chromosome | CDS | 2953225 | 2067 | - | 0.641509 |
NA | GSU0972 | ATPase, AAA family | chromosome | CDS | 1048581 | 2232 | + | 0.66353 |
NA | GSU0850 | hypothetical protein | chromosome | CDS | 910016 | 807 | + | 0.598513 |
NA | GSU2788 | conserved hypothetical protein | chromosome | CDS | 3067408 | 561 | + | 0.631016 |
NA | GSU0331 | trypsin domain/PDZ domain protein | chromosome | CDS | 361506 | 1395 | + | 0.581362 |
NA | GSU0566 | glutaredoxin family protein | chromosome | CDS | 597066 | 252 | + | 0.603175 |
NA | GSU0894 | peptidyl-prolyl cis-trans isomerase, cyclophilin-type | chromosome | CDS | 957394 | 516 | + | 0.591085 |
NA | GSU1995 | hypothetical protein | chromosome | CDS | 2187104 | 729 | - | 0.556927 |
NA | GSU3192 | heat shock protein, Hsp20 family | chromosome | CDS | 3499180 | 450 | + | 0.615556 |
NA | GSU2756 | hypothetical protein | chromosome | CDS | 3031262 | 768 | + | 0.679688 |
NA | GSU2645 | cytochrome c family protein | chromosome | CDS | 2915960 | 876 | - | 0.624429 |
NA | GSU1189 | peptidase, M48 family | chromosome | CDS | 1294633 | 951 | - | 0.635121 |
NA | GSU2496 | hypothetical protein | chromosome | CDS | 2745508 | 1716 | - | 0.593823 |
NA | GSU3347 | peptidase, U32 family | chromosome | CDS | 3677009 | 2373 | + | 0.65571 |
NA | GSU3046 | flagellar protein FlgJ-like protein | chromosome | CDS | 3349686 | 381 | - | 0.643045 |
NA | GSU2105 | hypothetical protein | chromosome | CDS | 2316573 | 2031 | - | 0.563762 |
NA | GSU0893 | thioredoxin peroxidase | chromosome | CDS | 956555 | 543 | - | 0.631676 |
NA | GSU3378 | glutamate-ammonia ligase adenylyltransferase domain protein | chromosome | CDS | 3711595 | 3054 | - | 0.627701 |
NA | GSU0223 | protoheme IX farnesyl transferase, putative | chromosome | CDS | 231371 | 813 | + | 0.706027 |
NA | GSU2451 | PilB-related protein | chromosome | CDS | 2689800 | 414 | - | 0.678744 |
NA | GSU1567 | peptidase, M48 family | chromosome | CDS | 1721015 | 861 | + | 0.614402 |
NA | GSU3283 | cytochrome c biogenesis protein, CcmF/CcyK/CcsA family | chromosome | CDS | 3601854 | 816 | + | 0.595588 |
NA | GSU0313 | dnaJ domain protein | chromosome | CDS | 344584 | 768 | + | 0.64974 |
NA | GSU1334 | cytochrome c family protein | chromosome | CDS | 1461505 | 1440 | - | 0.667361 |
NA | GSU2521 | conserved hypothetical protein | chromosome | CDS | 2779657 | 588 | - | 0.659864 |
NA | GSU2409 | heat shock protein, Hsp20 family | chromosome | CDS | 2643081 | 399 | - | 0.58396 |
NA | GSU3348 | chaperonin, 33 kDa family | chromosome | CDS | 3679517 | 906 | + | 0.640177 |
NA | GSU2773 | conserved domain protein | chromosome | CDS | 3053934 | 972 | - | 0.38786 |
NA | GSU0361 | PPIC-type PPIASE domain protein | chromosome | CDS | 392844 | 894 | - | 0.599553 |
NA | GSU0462 | peptidase, M48 family | chromosome | CDS | 492743 | 1074 | - | 0.654562 |
NA | GSU3446 | thioredoxin family protein, selenocysteine-containing | chromosome | CDS | 3791654 | 453 | - | 0.686534 |
NA | GSU1913 | glycoprotease family protein | chromosome | CDS | 2092586 | 693 | - | 0.620491 |
NA | GSU0228 | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative | chromosome | CDS | 235556 | 504 | - | 0.611111 |
NA | GSU2410 | heat shock protein, Hsp20 family | chromosome | CDS | 2643517 | 450 | - | 0.551111 |
NA | GSU0015 | PPIC-type PPIASE domain protein | chromosome | CDS | 23311 | 966 | - | 0.599379 |
NA | GSU0382 | conserved hypothetical protein | chromosome | CDS | 415717 | 405 | + | 0.617284 |
NA | GSU2124 | thioredoxin-related domain protein | chromosome | CDS | 2343480 | 840 | + | 0.577381 |
NA | GSU1352 | conserved hypothetical protein | chromosome | CDS | 1478792 | 225 | + | 0.617778 |
NA | GSU2880 | cytochrome c biogenesis protein, CcmF/CcyK/CcsA family | chromosome | CDS | 3155698 | 834 | - | 0.609113 |
NA | GSU2075 | subtilisin | chromosome | CDS | 2279884 | 1458 | - | 0.625514 |
NA | GSU2958 | thiol:disulfide interchange protein, putative | chromosome | CDS | 3255253 | 687 | + | 0.647744 |
NA | GSU1615 | membrane protein, putative | chromosome | CDS | 1768108 | 1278 | - | 0.543818 |
NA | GSU2430 | SPFH/Band 7 domain protein | chromosome | CDS | 2664995 | 786 | - | 0.639949 |
NA | GSU2673 | hypothetical protein | chromosome | CDS | 2947883 | 1341 | + | 0.598061 |
NA | GSU2431 | membrane protein, putative | chromosome | CDS | 2665867 | 1302 | - | 0.673579 |
NA | GSU2002 | conserved domain protein | chromosome | CDS | 2194489 | 1104 | - | 0.610507 |
NA | GSU0856 | peptidase, M48 family | chromosome | CDS | 915644 | 864 | - | 0.640046 |
NA | GSU2812 | glutaredoxin family protein | chromosome | CDS | 3091152 | 402 | + | 0.604478 |
NA | GSU2406 | dnaJ domain protein | chromosome | CDS | 2641113 | 942 | - | 0.609342 |
NA | GSU1820 | protein-P-II uridylyltransferase, putative | chromosome | CDS | 1985796 | 2709 | - | 0.572905 |
NA | GSU2433 | ATP-dependent protease, putative | chromosome | CDS | 2667497 | 2466 | - | 0.639903 |
NA | GSU1540 | lipoprotein, putative | chromosome | CDS | 1694228 | 1215 | + | 0.427161 |
NA | GSU0066 | AhpC/Tsa family protein, selenocysteine-containing | chromosome | CDS | 82566 | 708 | + | 0.590395 |
NA | GSU0533 | cytochrome c family protein, putative | chromosome | CDS | 566260 | 405 | + | 0.607407 |
NA | GSU2935 | cytochrome c family protein | chromosome | CDS | 3231104 | 1974 | - | 0.650963 |
NA | GSU0538 | heat shock protein, Hsp20 family | chromosome | CDS | 571372 | 444 | - | 0.601351 |
NA | GSU0614 | cytochrome c biogenesis protein, CcmF/CcyK/CcsA family | chromosome | CDS | 649955 | 852 | + | 0.580986 |
NA | GSU1648 | cytochrome c family protein | chromosome | CDS | 1806404 | 813 | - | 0.575646 |
NA | GSU0489 | Mg chelatase-related protein | chromosome | CDS | 519735 | 1530 | + | 0.623529 |
NA | GSU1763 | dnaJ domain protein | chromosome | CDS | 1925715 | 291 | - | 0.56701 |
NA | GSU2988 | conserved hypothetical protein | chromosome | CDS | 3279233 | 1371 | + | 0.66302 |
NA | GSU0613 | ResB-like family protein | chromosome | CDS | 648569 | 1365 | + | 0.574359 |
NA | GSU0539 | hypothetical protein | chromosome | CDS | 571962 | 177 | - | 0.514124 |
NA | GSU1728 | conserved hypothetical protein | chromosome | CDS | 1893203 | 1011 | + | 0.588526 |
NA | GSU1945 | fibronectin type III domain protein | chromosome | CDS | 2130067 | 3144 | - | 0.595102 |
NA | GSU1721 | radical SAM domain protein | chromosome | CDS | 1884525 | 753 | + | 0.641434 |
NA | GSU0891 | subtilase domain protein | chromosome | CDS | 951817 | 2481 | + | 0.667876 |
NA | GSU0480 | NifU-like domain protein | chromosome | CDS | 512162 | 225 | + | 0.608889 |
NA | GSU2678 | heat shock protein, Hsp20 family | chromosome | CDS | 2957582 | 456 | + | 0.570175 |
NA | GSU2556 | peptidase, U32 family | chromosome | CDS | 2818455 | 1215 | + | 0.671605 |
NA | GSU1865 | metalloendopeptidase, putative, glycoprotease family | chromosome | CDS | 2041368 | 1023 | - | 0.647116 |
NA | GSU2956 | redox-active disulfide protein 2 | chromosome | CDS | 3254643 | 237 | + | 0.514768 |
NA | GSU0383 | peptidyl-prolyl cis-trans isomerase, FKBP-type | chromosome | CDS | 416237 | 429 | + | 0.620047 |
NA | GSU2887 | cytochrome c family protein | chromosome | CDS | 3170511 | 2655 | - | 0.650094 |
NA | GSU1926 | conserved hypothetical protein | chromosome | CDS | 2104609 | 594 | + | 0.599327 |
NA | GSU2330 | membrane protein, putative | chromosome | CDS | 2549226 | 516 | + | 0.674419 |
NA | GSU2913 | cytochrome c family protein | chromosome | CDS | 3209979 | 840 | - | 0.602381 |
NA | GSU0016 | PPIC-type PPIASE domain protein | chromosome | CDS | 24354 | 942 | - | 0.597665 |
NA | GSU0704 | hypothetical protein | chromosome | CDS | 751546 | 1329 | + | 0.641836 |
NA | GSU0705 | cytochrome c biogenesis protein, CcmF/CcyK/CcsA family | chromosome | CDS | 752867 | 831 | + | 0.618532 |
NA | GSU2074 | PPIC-type PPIASE domain protein | chromosome | CDS | 2278904 | 966 | - | 0.580745 |
NA | GSU2408 | heat shock protein, Hsp20 family | chromosome | CDS | 2642563 | 483 | - | 0.561077 |
NA | GSU2090 | hypothetical protein | chromosome | CDS | 2296177 | 1584 | + | 0.609217 |
NA | GSU3447 | AhpC/TSA family protein | chromosome | CDS | 3792116 | 468 | - | 0.604701 |
NA | GSU1155 | glutaredoxin family protein | chromosome | CDS | 1261184 | 372 | - | 0.548387 |
NA | GSU3143 | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative | chromosome | CDS | 3451151 | 435 | + | 0.613793 |
NA | GSU3050 | flagella basal body P-ring formation protein flgA, putative | chromosome | CDS | 3352242 | 747 | - | 0.638554 |
NA | GSU2745 | ATPase, AAA family | chromosome | CDS | 3020923 | 1488 | - | 0.679435 |
NA | GSU2429 | PPIC-type PPIASE domain protein | chromosome | CDS | 2663855 | 1056 | + | 0.604167 |
NA | GSU2210 | cytochrome c family protein | chromosome | CDS | 2425529 | 2136 | - | 0.632491 |
ccdA | GSU1322 | cytochrome c biogenesis protein CcdA | chromosome | CDS | 1447999 | 729 | + | 0.595336 |
clpB | GSU0658 | ClpB protein | chromosome | CDS | 693347 | 2598 | + | 0.605851 |
clpP | GSU1792 | ATP-dependent Clp protease, proteolytic subunit ClpP | chromosome | CDS | 1957709 | 600 | - | 0.511667 |
clpX | GSU1791 | ATP-dependent Clp protease, ATP-binding subunit ClpX | chromosome | CDS | 1956459 | 1254 | - | 0.513557 |
cyd-1 | GSU0364 | cytochrome c3 | chromosome | CDS | 397076 | 276 | - | 0.605072 |
cydC | GSU1216 | transport ATP-binding protein CydC | chromosome | CDS | 1319807 | 1647 | + | 0.676988 |
cydD | GSU1215 | transport ATP-binding protein CydD | chromosome | CDS | 1318089 | 1722 | + | 0.698026 |
cysT | GSU1347 | sulfate ABC transporter, permease protein | chromosome | CDS | 1474119 | 903 | + | 0.673311 |
degQ | GSU0080 | protease degQ | chromosome | CDS | 91907 | 1416 | + | 0.63065 |
dnaJ | GSU0034 | chaperone protein dnaJ | chromosome | CDS | 44496 | 1122 | + | 0.604278 |
dnaK | GSU0033 | chaperone protein dnaK | chromosome | CDS | 42473 | 1911 | + | 0.611722 |
draG | GSU2800 | dinitrogenase reductase activating glycohydrolase | chromosome | CDS | 3079699 | 930 | + | 0.641935 |
fbP-2 | GSU2274 | FKBP-type peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 2491287 | 417 | - | 0.673861 |
fliS | GSU3036 | flagellar protein FliS | chromosome | CDS | 3342430 | 435 | - | 0.556322 |
ftsH-1 | GSU1180 | cell division protein FtsH | chromosome | CDS | 1286588 | 1854 | + | 0.600863 |
ftsH-2 | GSU1809 | cell division protein FtsH | chromosome | CDS | 1973772 | 1845 | - | 0.577236 |
groES | GSU3339 | chaperonin, 10 kDa | chromosome | CDS | 3664919 | 288 | + | 0.579861 |
groeL | GSU3340 | 60 kDa chaperonin | chromosome | CDS | 3665270 | 1635 | + | 0.629358 |
grpE | GSU0032 | GrpE protein | chromosome | CDS | 41789 | 603 | + | 0.615257 |
htpG | GSU2390 | heat shock protein HtpG | chromosome | CDS | 2620678 | 1953 | + | 0.625192 |
hypB | GSU0305 | hydrogenase accessory protein HypB | chromosome | CDS | 337596 | 765 | + | 0.586928 |
hypC | GSU0307 | hydrogenase assembly chaperone hypC/hupF | chromosome | CDS | 340674 | 231 | + | 0.588745 |
hypD | GSU0308 | hydrogenase expression/formation protein HypD | chromosome | CDS | 340904 | 1092 | + | 0.658425 |
hypE | GSU0309 | hydrogenase expression/formation protein HypE | chromosome | CDS | 342016 | 1014 | + | 0.64497 |
hypF | GSU0306 | hydrogenase maturation protein HypF | chromosome | CDS | 338376 | 2292 | + | 0.649215 |
loN-1 | GSU0923 | ATP-dependent protease La | chromosome | CDS | 990895 | 2307 | + | 0.65453 |
loN-2 | GSU1790 | ATP-dependent protease La | chromosome | CDS | 1954021 | 2424 | - | 0.538366 |
loN-3 | GSU3193 | ATP-dependent protease La | chromosome | CDS | 3499629 | 2460 | + | 0.61748 |
msrA | GSU3161 | peptide methionine sulfoxide reductase | chromosome | CDS | 3467663 | 489 | + | 0.648262 |
pcM | GSU1524 | protein-L-isoaspartate O-methyltransferase | chromosome | CDS | 1670581 | 651 | + | 0.602151 |
pilD | GSU2043 | type 4 prepilin-like proteins leader peptide processing enzyme | chromosome | CDS | 2238751 | 780 | - | 0.592308 |
ppcA | GSU0612 | cytochrome c3 | chromosome | CDS | 648095 | 276 | + | 0.576087 |
ppiA | GSU3319 | peptidyl-prolyl cis-trans isomerase A | chromosome | CDS | 3645704 | 597 | - | 0.623116 |
ppiC | GSU0823 | peptidyl-prolyl cis-trans isomerase C | chromosome | CDS | 884672 | 279 | + | 0.605735 |
psaD | GSU0352 | thiol peroxidase | chromosome | CDS | 382951 | 516 | + | 0.562016 |
radA | GSU0285 | DNA repair protein RadA | chromosome | CDS | 313908 | 1353 | - | 0.645233 |
smpB | GSU1709 | SsrA-binding protein | chromosome | CDS | 1873660 | 462 | + | 0.515152 |
sppA-1 | GSU0820 | signal peptide peptidase SppA, 36K type | chromosome | CDS | 880374 | 966 | + | 0.673913 |
sppA-2 | GSU1234 | signal peptide peptidase SppA, 36K type | chromosome | CDS | 1336399 | 783 | + | 0.628352 |
tig | GSU1793 | trigger factor | chromosome | CDS | 1958330 | 1296 | - | 0.51466 |
trx | GSU3281 | thioredoxin | chromosome | CDS | 3600648 | 330 | - | 0.557576 |
trxB | GSU0488 | thioredoxin reductase | chromosome | CDS | 518779 | 951 | + | 0.62776 |