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2024-04-29 05:28:48

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Lactobacillus sakei subsp. sakei 23K, 23K

Number of genes found: 53

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactobacillus sakei subsp. sakei 23K, 23K
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LSA0351 Putative O-sialoglycoprotein metallo-endopeptidase (M22 family)chromosome CDS351004 1035 + 0.464734
NA LSA0436 Putative peptidylprolyl isomerase (Peptidylprolyl cis-trans isomerase) (PPIase)chromosome CDS443641 585 + 0.408547
NA LSA0119 Hypothetical proteinchromosome CDS110976 441 + 0.408163
NA LSA0552 Organic hydroperoxide resistance proteinchromosome CDS571267 408 + 0.426471
NA LSA0349 Putative O-sialoglycoprotein metallo-endopeptidase (M22 family)chromosome CDS349739 726 + 0.450413
NA LSA0050 Putative molecular chaperone, small heat shock protein, Hsp20 familychromosome CDS45540 441 + 0.390023
NA LSA0530 Hypothetical proteinchromosome CDS549136 525 - 0.407619
NA LSA0334 Hypothetical extracellular protein precursorchromosome CDS338874 345 + 0.411594
NA LSA0112 Hypothetical proteinchromosome CDS105138 477 + 0.345912
NA LSA1309 Hypothetical proteinchromosome CDS1282468 375 + 0.426667
NA LSA0499 Hypothetical integral membrane proteinchromosome CDS518311 1134 + 0.405644
NA LSA1540 Hypothetical extracellular protein precursorchromosome CDS1509980 918 + 0.398693
NA LSA1109 Putative ABC-type system involved in Fe-S cluster assembly (sufB homolog)chromosome CDS1100161 1404 - 0.446581
NA LSA0403 Putative thioredoxin reductasechromosome CDS412250 987 + 0.452888
NA LSA1113 Putative ABC-type ATP-binding protein involved in Fe-S cluster assembly (SufC homolog)chromosome CDS1104572 783 - 0.394636
NA LSA0865 Putative protein methionine sulfoxide reductasechromosome CDS854459 432 + 0.423611
NA LSA1683 Putative DNA repair protein RadAchromosome CDS1664119 1365 - 0.449084
NA LSA1771 Putative type IV leader peptidase (Bacterial type II secretion system)chromosome CDS1742507 690 + 0.436232
NA LSA1112 Putative ABC-type system involved in Fe-S cluster assembly (SufB homolog)chromosome CDS1103255 1305 - 0.435249
NA LSA1503 Hypothetical proteinchromosome CDS1474756 555 + 0.378378
clpB LSA1040 Chaperone ClpBchromosome CDS1030369 2595 - 0.403468
clpC LSA1779 ATPase/chaperone ClpC, putative specificity factor for ClpP proteasechromosome CDS1755046 2469 - 0.444309
clpE LSA1465 ATPase/chaperone ClpE, putative specificity factor for ClpP proteasechromosome CDS1440481 2166 + 0.427516
clpL LSA0207 ATPase/chaperone ClpL, putative specificity factor for ClpP proteasechromosome CDS199842 2124 + 0.395009
clpP LSA0531 ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS549884 585 - 0.423932
clpX LSA1061 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome CDS1054588 1254 - 0.409888
dnaJ LSA1235 Chaperone protein DnaJ (heat-shock protein Hsp40)chromosome CDS1213558 1152 - 0.453993
dnaK LSA1236 Chaperone protein DnaK (heat-shock protein Hsp70)chromosome CDS1214829 1842 - 0.39848
ftsH LSA1597 ATP-dependent zinc metalloendopeptidase FtsH (cell division protein FtsH)chromosome CDS1581251 2091 - 0.422764
groL LSA0359 Chaperonin GroEL (60 kDa chaperonin) (Protein Cpn60)chromosome CDS358702 1626 + 0.421894
groS LSA0358 Co-chaperonin GroES (10 kD chaperonin) (Protein Cpn10)chromosome CDS358364 285 + 0.414035
grpE LSA1237 Co-chaperone protein GrpEchromosome CDS1216707 603 - 0.394693
hslO LSA1596 Molecular chaperone, Hsp33 familychromosome CDS1580278 879 - 0.428896
hslU LSA0984 ATP-dependent Hsl protease, ATP-binding subunit HslUchromosome CDS977346 1428 - 0.416667
hslV LSA0985 ATP-dependent Hsl protease, proteolytic subunit HslVchromosome CDS978777 546 - 0.417582
htpX LSA1618 Membrane metalloprotease, HtpX homologchromosome CDS1605249 900 - 0.456667
htrA LSA0082 Serine protease HtrA precursor, Trypsin familychromosome CDS78181 1224 + 0.41585
mecA LSA1448 similar to MecA, putative adapter protein for Clp proteasechromosome CDS1421409 690 - 0.349275
msrA LSA0866 Protein methionine sulfoxide reductasechromosome CDS854890 519 + 0.44316
nrdG LSA1458 Anaerobic ribonucleotide reductase activator proteinchromosome CDS1432266 582 - 0.424399
nrdH LSA0942 Ribonucleotide reductase, NrdH-redoxinchromosome CDS930023 231 - 0.367965
pepO LSA0053 Endopeptidase Ochromosome CDS48377 1896 + 0.424051
pflA LSA0973 Formate C-acetyltransferase activating enzyme (Pyruvate formate-lyase activating enzyme)chromosome CDS962538 810 - 0.385185
prtM LSA0626 Protein maturation protease precursor (peptidylprolyl isomerase)chromosome CDS629874 912 - 0.362939
smpB LSA1410 t/mRNA binding protein (SsrA RNA binding protein)chromosome CDS1378262 471 - 0.401274
tig LSA1062 Trigger factorchromosome CDS1056051 1296 - 0.381173
tpx LSA0104 Thiol peroxidase (Hydroperoxide reductase, Peroxiredoxin)chromosome CDS99949 495 - 0.412121
trxA1 LSA0218 Thioredoxinchromosome CDS212784 318 + 0.383648
trxA2 LSA0307 Thioredoxinchromosome CDS311169 336 + 0.354167
trxA3 LSA0394 Thioredoxinchromosome CDS403233 312 + 0.384615
trxA4 LSA0634 Thioredoxinchromosome CDS636150 321 + 0.370717
trxB1 LSA0435 Thioredoxin reductasechromosome CDS442510 987 - 0.448835
trxB2 LSA0520 Thioredoxin reductasechromosome CDS536198 921 + 0.449511