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2024-04-29 18:46:43

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Rhodopseudomonas palustris BisB18, BisB18

Number of genes found: 158

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Rhodopseudomonas palustris BisB18, BisB18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RPC_4907 cytochrome c biogenesis protein, transmembrane regionchromosome CDS5476662 1809 + 0.700387
NA RPC_0342 UTP-GlnB (protein PII) uridylyltransferase, GlnDchromosome CDS362242 2796 + 0.649499
NA RPC_1636 xanthine dehydrogenase accessory factorchromosome CDS1769449 693 + 0.66811
NA RPC_4929 heat shock protein Hsp90chromosome CDS5499611 1863 - 0.645196
NA RPC_3924 conserved hypothetical proteinchromosome CDS4356627 699 - 0.596566
NA RPC_3324 ATPase AAA-2chromosome CDS3681021 2409 - 0.632628
NA RPC_3152 glutathione S-transferase-likechromosome CDS3495571 708 - 0.637006
NA RPC_1480 Twin-arginine translocation pathway signalchromosome CDS1615504 501 + 0.670659
NA RPC_4421 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductasechromosome CDS4928387 1719 - 0.700989
NA RPC_4135 glutathione S-transferase-likechromosome CDS4594807 720 - 0.605556
NA RPC_1934 thiol-disulfide isomerase and thioredoxinschromosome CDS2104873 237 - 0.64557
NA RPC_3591 OsmC-like proteinchromosome CDS3993264 426 + 0.65493
NA RPC_3657 periplasmic protein-likechromosome CDS4072992 1254 + 0.501595
NA RPC_3768 hydrogenase assembly chaperone hypC/hupFchromosome CDS4189226 315 - 0.692064
NA RPC_0327 GrpE proteinchromosome CDS348161 618 + 0.652104
NA RPC_0329 Chaperone DnaKchromosome CDS350281 1899 + 0.636124
NA RPC_1920 Peroxidasechromosome CDS2092194 726 - 0.640496
NA RPC_4692 peptidase M48, Ste24pchromosome CDS5254003 933 - 0.676313
NA RPC_1617 cytochrome c biogenesis protein, transmembrane regionchromosome CDS1751809 735 + 0.661224
NA RPC_2391 trigger factorchromosome CDS2594052 1362 + 0.635095
NA RPC_1176 Glycyl-radical enzyme activatingchromosome CDS1279162 921 + 0.619978
NA RPC_0763 heat shock protein Hsp20chromosome CDS845360 477 - 0.649895
NA RPC_4726 chaperonin GroELchromosome CDS5286835 1656 + 0.66244
NA RPC_1528 glutathione S-transferase-likechromosome CDS1665885 699 + 0.648069
NA RPC_2875 Leucyltransferasechromosome CDS3128745 693 + 0.673882
NA RPC_0396 signal peptide peptidase SppA, 36K typechromosome CDS428504 978 - 0.661554
NA RPC_4557 hydrogenase expression/formation protein HypDchromosome CDS5088900 1170 - 0.67265
NA RPC_1138 chaperone DnaJ-likechromosome CDS1237993 978 + 0.677914
NA RPC_0302 heat shock protein HslVU, ATPase subunit HslUchromosome CDS324509 1305 - 0.645977
NA RPC_4138 ATP-binding region, ATPase-likechromosome CDS4600171 2664 - 0.511637
NA RPC_2521 protein-L-isoaspartate O-methyltransferasechromosome CDS2732348 651 + 0.697389
NA RPC_1837 cytochrome C biogenesis proteinchromosome CDS1992717 501 + 0.662675
NA RPC_2882 Leucyltransferasechromosome CDS3134157 693 + 0.675325
NA RPC_2861 peptidase M48, Ste24pchromosome CDS3115457 1419 + 0.684989
NA RPC_1329 AAA ATPase, central regionchromosome CDS1445491 921 + 0.618892
NA RPC_2589 peptidyl-prolyl cis-trans isomerase, cyclophilin typechromosome CDS2816569 564 + 0.629433
NA RPC_0734 glutathione S-transferase-likechromosome CDS803772 615 + 0.63252
NA RPC_2394 ATP-dependent protease Lachromosome CDS2598306 2472 + 0.633495
NA RPC_0409 heat shock protein Hsp20chromosome CDS442530 426 + 0.603286
NA RPC_2468 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS2675508 1989 - 0.670186
NA RPC_2310 conserved hypothetical proteinchromosome CDS2510059 963 - 0.634476
NA RPC_3336 glutathione S-transferase-likechromosome CDS3694523 657 - 0.649924
NA RPC_3171 chaperonin Cpn10chromosome CDS3514251 318 + 0.603774
NA RPC_1841 Peptidase S1C, Dochromosome CDS1996874 1587 + 0.666037
NA RPC_2649 Arginyltransferasechromosome CDS2880644 777 - 0.666667
NA RPC_0525 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS565430 933 - 0.648446
NA RPC_4843 band 7 proteinchromosome CDS5405337 1011 + 0.645895
NA RPC_2462 heat shock protein Hsp20chromosome CDS2670471 507 - 0.641026
NA RPC_1753 peptidase C15, pyroglutamyl peptidase Ichromosome CDS1907123 660 - 0.704545
NA RPC_2567 protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS2785884 666 + 0.659159
NA RPC_4725 chaperonin Cpn10chromosome CDS5286401 297 + 0.622896
NA RPC_3688 SirA-likechromosome CDS4112635 243 - 0.580247
NA RPC_0206 heme exporter protein CcmBchromosome CDS226797 669 + 0.710015
NA RPC_2532 Peptidylprolyl isomerasechromosome CDS2743897 468 + 0.673077
NA RPC_3329 heat shock protein DnaJ-likechromosome CDS3688699 738 - 0.663957
NA RPC_0209 periplasmic protein thiolchromosome CDS228500 594 + 0.691919
NA RPC_0877 ADP-ribosyl-(dinitrogen reductase) hydrolasechromosome CDS967548 888 - 0.665541
NA RPC_4596 FAD-dependent pyridine nucleotide-disulphide oxidoreductasechromosome CDS5130344 909 - 0.70077
NA RPC_3834 peptide methionine sulfoxide reductasechromosome CDS4263293 708 - 0.629943
NA RPC_3593 glutathione S-transferase-likechromosome CDS3994195 666 + 0.597598
NA RPC_2284 DNA repair protein RadAchromosome CDS2484178 1512 - 0.684524
NA RPC_4914 Hsp33 proteinchromosome CDS5483975 999 - 0.675676
NA RPC_1836 cytochrome c-type biogenesis protein CcmFchromosome CDS1990730 1983 + 0.672214
NA RPC_0365 Peptidoglycan-binding domain 1chromosome CDS389665 1371 + 0.706783
NA RPC_0439 glutathione S-transferase-likechromosome CDS473441 693 + 0.670996
NA RPC_3761 hydrogenase accessory protein HypBchromosome CDS4184599 924 - 0.632035
NA RPC_3261 HflC proteinchromosome CDS3610256 903 - 0.638981
NA RPC_4129 hypothetical proteinchromosome CDS4591752 228 + 0.635965
NA RPC_3665 Glutathione peroxidasechromosome CDS4078542 477 - 0.607966
NA RPC_0388 thioredoxinchromosome CDS421790 321 + 0.619938
NA RPC_0264 thioredoxin-relatedchromosome CDS282106 918 + 0.689542
NA RPC_2862 DSBA oxidoreductasechromosome CDS3116961 768 + 0.647135
NA RPC_4242 transcriptional regulator, XRE familychromosome CDS4723313 378 + 0.637566
NA RPC_1835 CcmE/CycJ proteinchromosome CDS1990236 498 + 0.662651
NA RPC_4411 hypothetical proteinchromosome CDS4919359 276 + 0.663043
NA RPC_0046 metalloendopeptidase, putative, glycoprotease familychromosome CDS52957 1146 - 0.697208
NA RPC_3163 putative proteasome-type proteasechromosome CDS3507926 810 + 0.624691
NA RPC_3690 Urease accessory protein UreFchromosome CDS4113696 726 - 0.695592
NA RPC_3417 Peptidase S1C, Dochromosome CDS3804796 1404 - 0.675926
NA RPC_3759 hydrogenase expression/formation protein HypDchromosome CDS4183229 1131 - 0.671972
NA RPC_4896 hypothetical proteinchromosome CDS5466180 1326 - 0.506033
NA RPC_3259 Peptidase S1C, Dochromosome CDS3608218 1494 - 0.653949
NA RPC_0330 Chaperone DnaJchromosome CDS352360 1140 + 0.65614
NA RPC_2987 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS3268236 1041 - 0.641691
NA RPC_3833 Protein-methionine-S-oxide reductasechromosome CDS4262857 414 - 0.635266
NA RPC_4304 PDZ/DHR/GLGFchromosome CDS4804623 972 + 0.662551
NA RPC_3172 chaperonin GroELchromosome CDS3514657 1644 + 0.636861
NA RPC_2631 SsrA-binding proteinchromosome CDS2862987 474 + 0.616034
NA RPC_4377 peptidase M48, Ste24pchromosome CDS4881674 1137 + 0.690413
NA RPC_1127 peptidase S1 and S6, chymotrypsin/Hapchromosome CDS1226719 1101 - 0.651226
NA RPC_0260 molecular chaperone, Hsp70 classchromosome CDS275668 1254 + 0.665869
NA RPC_1792 peptidase S8 and S53, subtilisin, kexin, sedolisinchromosome CDS1946142 2061 + 0.663755
NA RPC_4555 (NiFe) hydrogenase maturation protein HypFchromosome CDS5085283 2358 + 0.703138
NA RPC_0909 Isoprenylcysteine carboxyl methyltransferasechromosome CDS1006623 474 - 0.666667
NA RPC_4559 hydrogenase accessory protein HypBchromosome CDS5090351 906 - 0.654525
NA RPC_3697 Urease accessory protein UreDchromosome CDS4118428 834 - 0.707434
NA RPC_2981 Pyruvate formate-lyase activatingchromosome CDS3262593 804 + 0.66791
NA RPC_4443 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS4950559 555 + 0.609009
NA RPC_4032 urease accessory protein UreGchromosome CDS4481357 624 - 0.607372
NA RPC_4941 peptide methionine sulfoxide reductasechromosome CDS5511614 657 - 0.656012
NA RPC_3574 Vesicle-fusing ATPasechromosome CDS3973523 1944 + 0.681584
NA RPC_4556 Hydrogenase expression/formation protein HypEchromosome CDS5087869 1035 - 0.678261
NA RPC_4876 Thioredoxin-likechromosome CDS5445543 675 + 0.68
NA RPC_0207 heme exporter protein CcmCchromosome CDS227572 753 + 0.665339
NA RPC_1437 Carbamoyltransferasechromosome CDS1562741 1806 - 0.65227
NA RPC_0536 heat shock protein DnaJ-likechromosome CDS578637 660 + 0.636364
NA RPC_3262 HflK proteinchromosome CDS3611155 1152 - 0.661458
NA RPC_3760 hydrogenase assembly chaperone hypC/hupFchromosome CDS4184356 228 - 0.671053
NA RPC_0922 Radical SAMchromosome CDS1019811 633 - 0.650869
NA RPC_2848 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS3095464 537 + 0.635009
NA RPC_0317 Mg chelatase-related proteinchromosome CDS337619 1539 - 0.711501
NA RPC_0019 glutathione S-transferase-likechromosome CDS22380 669 + 0.663677
NA RPC_2590 peptidyl-prolyl cis-trans isomerase, cyclophilin typechromosome CDS2817181 471 + 0.658174
NA RPC_4641 protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS5190168 888 + 0.619369
NA RPC_3758 Hydrogenase expression/formation protein HypEchromosome CDS4182186 1047 - 0.678128
NA RPC_1846 Glutamate-ammonia-ligase adenylyltransferasechromosome CDS2004836 2967 + 0.67307
NA RPC_3515 Ribonucleoside-triphosphate reductase, anaerobic-likechromosome CDS3906741 660 - 0.65303
NA RPC_3986 OsmC-like proteinchromosome CDS4440382 432 - 0.641204
NA RPC_0519 Glutaredoxin, GrxCchromosome CDS560975 342 - 0.608187
NA RPC_2687 cytochrome oxidase assemblychromosome CDS2917208 1089 + 0.699724
NA RPC_4844 protein of unknown function DUF107chromosome CDS5406424 444 + 0.68018
NA RPC_4134 glutathione S-transferase-likechromosome CDS4594112 696 - 0.653736
NA RPC_3838 thioredoxin reductasechromosome CDS4269688 966 + 0.635611
NA RPC_2393 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome CDS2596778 1275 + 0.623529
NA RPC_4493 hydrogenase accessory protein HypBchromosome CDS5006203 903 - 0.654485
NA RPC_1673 OsmC-like proteinchromosome CDS1805880 1230 + 0.686992
NA RPC_3000 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS3296630 933 + 0.646302
NA RPC_1458 FAD-dependent pyridine nucleotide-disulphide oxidoreductasechromosome CDS1589849 1029 + 0.632653
NA RPC_1635 protein of unknown function DUF182chromosome CDS1769123 324 + 0.688272
NA RPC_1346 glutathione S-transferase-likechromosome CDS1467623 615 - 0.627642
NA RPC_4779 peptidase U32chromosome CDS5339528 978 - 0.662577
NA RPC_2913 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS3177916 1044 - 0.644636
NA RPC_4351 peptidase S49chromosome CDS4851985 909 - 0.677668
NA RPC_2392 Endopeptidase Clpchromosome CDS2595744 633 + 0.636651
NA RPC_1483 Methionine sulfoxide reductase Bchromosome CDS1617214 459 + 0.627451
NA RPC_4908 DSBA oxidoreductasechromosome CDS5478497 633 + 0.676145
NA RPC_4558 hydrogenase assembly chaperone hypC/hupFchromosome CDS5090066 273 - 0.652015
NA RPC_4778 peptidase U32chromosome CDS5338502 921 - 0.644951
NA RPC_0463 nitrogen-fixing NifU-likechromosome CDS501258 567 + 0.650794
NA RPC_0590 hypothetical proteinchromosome CDS641549 264 - 0.590909
NA RPC_1599 Glutaredoxin-related proteinchromosome CDS1734384 372 + 0.607527
NA RPC_0622 Twin-arginine translocation pathway signalchromosome CDS672154 702 - 0.669516
NA RPC_2034 peptidase S49chromosome CDS2215841 789 + 0.656527
NA RPC_0303 20S proteasome, A and B subunitschromosome CDS325896 573 - 0.668412
NA RPC_0550 peptidase M48, Ste24pchromosome CDS597051 1512 - 0.668651
NA RPC_0464 peptidase M22, glycoproteasechromosome CDS501958 696 + 0.734195
NA RPC_3691 UreE urease accessory-likechromosome CDS4114402 636 - 0.660377
NA RPC_4743 ATP-dependent metalloprotease FtsHchromosome CDS5307302 1917 - 0.644236
NA RPC_3205 glutathione S-transferase-likechromosome CDS3549001 660 - 0.659091
NA RPC_2586 Outer membrane autotransporter barrelchromosome CDS2811851 3465 + 0.67417
NA RPC_2712 glutathione S-transferase-likechromosome CDS2942244 726 + 0.57989
NA RPC_4561 hydrogenase expression/formation protein (HUPF/HYPC)chromosome CDS5092242 351 - 0.632479
NA RPC_1081 Pyruvate formate-lyase activatingchromosome CDS1185931 804 + 0.66791
NA RPC_4124 glutathione S-transferase-likechromosome CDS4586037 654 + 0.633027
NA RPC_4277 ATPase AAA-2chromosome CDS4772652 2640 - 0.646591
NA RPC_4075 peroxiredoxin-like proteinchromosome CDS4529231 486 + 0.617284
NA RPC_4372 Twin-arginine translocation pathway signalchromosome CDS4873437 702 + 0.62963
NA RPC_0709 conserved hypothetical proteinchromosome CDS778735 921 - 0.705755