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2024-05-03 05:29:28

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Rhodoferax ferrireducens DSM 15236, DSM 15236

Number of genes found: 162

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Rhodoferax ferrireducens DSM 15236, DSM 15236
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Rfer_2180 co-chaperone Hsc20chromosome CDS2378250 534 + 0.561798
NA Rfer_1971 peptidylprolyl isomerase, FKBP-typechromosome CDS2117679 354 - 0.59322
NA Rfer_0117 AAA ATPasechromosome CDS119521 2082 + 0.628722
NA Rfer_0039 periplasmic protein thiolchromosome CDS43214 525 - 0.573333
NA Rfer_1970 GrpE proteinchromosome CDS2116953 564 - 0.590426
NA Rfer_1575 thiol:disulfide interchange protein DsbCchromosome CDS1704869 744 - 0.541667
NA Rfer_3408 urease accessory protein UreGchromosome CDS3791451 690 + 0.624638
NA Rfer_2068 metalloendopeptidase, putative, glycoprotease familychromosome CDS2241691 1077 + 0.640669
NA Rfer_1865 nitrogen-fixing NifU-likechromosome CDS2005389 561 + 0.602496
NA Rfer_0087 thiol-disulfide isomerase-like proteinchromosome CDS88135 513 + 0.606238
NA Rfer_0370 Ribonucleoside-triphosphate reductase, anaerobic-likechromosome CDS376804 717 + 0.655509
NA Rfer_0866 protein of unknown function DUF182chromosome CDS903299 1029 + 0.63654
NA Rfer_0651 hypothetical proteinchromosome CDS675239 567 - 0.544974
NA Rfer_3785 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS4230777 552 - 0.572464
NA Rfer_0043 heme exporter protein CcmCchromosome CDS46325 741 - 0.597841
NA Rfer_0415 Disulphide bond formation protein DsbBchromosome CDS424605 420 - 0.571429
NA Rfer_1123 thioredoxinchromosome CDS1206323 438 - 0.636986
NA Rfer_1919 ATPase AAA-2chromosome CDS2059202 2613 + 0.605817
NA Rfer_3112 putative glutathione S-transferase P subunitchromosome CDS3450498 729 - 0.652949
NA Rfer_2299 HflC proteinchromosome CDS2521920 900 - 0.537778
NA Rfer_0833 heat shock protein Hsp20chromosome CDS872844 510 - 0.566667
NA Rfer_1211 hypothetical proteinchromosome CDS1297512 369 + 0.517615
NA Rfer_1831 conserved hypothetical proteinchromosome CDS1968784 828 - 0.568841
NA Rfer_2598 peptide methionine sulfoxide reductasechromosome CDS2861539 543 - 0.596685
NA Rfer_0748 cytochrome c biogenesis protein, transmembrane proteinchromosome CDS783599 2175 - 0.646897
NA Rfer_2614 Organic radical activating enzymes-likechromosome CDS2878341 636 - 0.592767
NA Rfer_1556 ATP-dependent protease Lachromosome CDS1678911 2442 + 0.547912
NA Rfer_1553 trigger factorchromosome CDS1675454 1311 + 0.562929
NA Rfer_0189 peptidase M22, glycoproteasechromosome CDS186611 720 - 0.655556
NA Rfer_0396 Radical SAMchromosome CDS402972 1077 - 0.628598
NA Rfer_3005 conserved hypothetical proteinchromosome CDS3312297 405 + 0.597531
NA Rfer_2422 UTP-GlnB (protein PII) uridylyltransferase, GlnDchromosome CDS2670328 2592 + 0.613812
NA Rfer_3730 glutathione S-transferase-likechromosome CDS4161421 618 + 0.648867
NA Rfer_4093 hydrogenase assembly chaperone hypC/hupFchromosome CDS4568221 255 + 0.611765
NA Rfer_1598 conserved hypothetical proteinchromosome CDS1732924 381 - 0.572178
NA Rfer_0775 DSBA oxidoreductasechromosome CDS812157 675 + 0.594074
NA Rfer_1311 Glutaredoxin, GrxCchromosome CDS1403613 270 + 0.588889
NA Rfer_3660 Carbamoyltransferasechromosome CDS4078563 1692 - 0.5
NA Rfer_1276 Glutaredoxin-related proteinchromosome CDS1368952 327 - 0.562691
NA Rfer_0419 conserved hypothetical proteinchromosome CDS428717 645 - 0.565891
NA Rfer_0710 peptidase S1 and S6, chymotrypsin/Hapchromosome CDS751080 786 + 0.599237
NA Rfer_3822 Peptidase S1C, Dochromosome CDS4265158 1506 + 0.62085
NA Rfer_0047 glutathione S-transferase-likechromosome CDS49239 609 - 0.617406
NA Rfer_1131 chaperonin GroELchromosome CDS1214446 1659 - 0.588306
NA Rfer_3235 AAA ATPasechromosome CDS3584118 2520 - 0.600397
NA Rfer_2150 band 7 proteinchromosome CDS2334377 780 + 0.602564
NA Rfer_0097 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS99450 1380 - 0.638406
NA Rfer_2651 Septum formation initiatorchromosome CDS2917124 300 + 0.616667
NA Rfer_0732 OsmC-like proteinchromosome CDS771320 450 - 0.637778
NA Rfer_2207 hypothetical proteinchromosome CDS2412766 666 - 0.599099
NA Rfer_0471 Mg chelatase-related proteinchromosome CDS485575 1533 - 0.679061
NA Rfer_3009 chaperonin GroELchromosome CDS3315936 1635 + 0.634251
NA Rfer_1574 peptidase M61chromosome CDS1702899 1827 - 0.624521
NA Rfer_3551 heat shock protein Hsp90chromosome CDS3949537 1992 + 0.598394
NA Rfer_4098 hydrogenase assembly chaperone hypC/hupFchromosome CDS4572639 219 + 0.584475
NA Rfer_2418 ATP-dependent metalloprotease FtsHchromosome CDS2662350 1851 + 0.627228
NA Rfer_2396 Protein-methionine-S-oxide reductasechromosome CDS2640437 423 + 0.576832
NA Rfer_2898 thioredoxinchromosome CDS3207145 402 + 0.524876
NA Rfer_4087 HupE/UreJ proteinchromosome CDS4561681 603 - 0.61194
NA Rfer_3315 putative ATP-dependent protease La, putativechromosome CDS3680291 2421 - 0.624535
NA Rfer_2377 SirA-likechromosome CDS2618482 228 - 0.578947
NA Rfer_2967 glutathione S-transferase-likechromosome CDS3273829 612 + 0.517974
NA Rfer_0414 DSBA oxidoreductasechromosome CDS423952 657 - 0.570776
NA Rfer_0040 cytochrome c-type biogenesis protein CcmFchromosome CDS43735 1974 - 0.589666
NA Rfer_2631 glutathione S-transferase-likechromosome CDS2895851 720 + 0.580556
NA Rfer_1724 peptidase S49chromosome CDS1862420 1071 + 0.570495
NA Rfer_2102 Fe(II) trafficking protein YggXchromosome CDS2276550 273 - 0.582418
NA Rfer_4100 Hydrogenase expression/formation protein HypEchromosome CDS4573981 1065 + 0.646009
NA Rfer_1346 peptidyl-prolyl cis-trans isomerase, cyclophilin typechromosome CDS1448861 600 - 0.536667
NA Rfer_2781 protein-L-isoaspartate O-methyltransferasechromosome CDS3068556 795 - 0.633962
NA Rfer_2796 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS3090557 792 + 0.623737
NA Rfer_0067 hypothetical proteinchromosome CDS69848 372 + 0.669355
NA Rfer_1555 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome CDS1677523 1266 + 0.538705
NA Rfer_4017 glutathione S-transferase-likechromosome CDS4481736 705 + 0.64539
NA Rfer_2930 conserved hypothetical proteinchromosome CDS3241254 861 + 0.591173
NA Rfer_0830 heat shock protein DnaJ-likechromosome CDS867321 1098 - 0.630237
NA Rfer_0010 glutaredoxinchromosome CDS12308 366 + 0.603825
NA Rfer_3436 20S proteasome, A and B subunitschromosome CDS3824916 549 - 0.599271
NA Rfer_1969 Chaperone DnaKchromosome CDS2114912 1956 - 0.564928
NA Rfer_3463 peptidase M48, Ste24pchromosome CDS3854826 876 - 0.603881
NA Rfer_2959 peptidase S1 and S6, chymotrypsin/Hapchromosome CDS3266643 1143 - 0.608924
NA Rfer_2490 putative glutathione S-transferase-related proteinchromosome CDS2751203 942 - 0.627389
NA Rfer_1688 cytochrome oxidase assemblychromosome CDS1816750 1197 + 0.628237
NA Rfer_3642 thiol-disulfide isomerase and thioredoxinschromosome CDS4058957 237 + 0.594937
NA Rfer_0490 heat shock protein DnaJ-likechromosome CDS506981 981 + 0.638124
NA Rfer_1597 cytochrome c biogenesis protein, transmembrane proteinchromosome CDS1732177 735 - 0.606803
NA Rfer_3811 hypothetical proteinchromosome CDS4250838 582 + 0.601375
NA Rfer_1193 putative thioredoxinchromosome CDS1279282 327 - 0.675841
NA Rfer_0367 Glutamate-ammonia-ligase adenylyltransferasechromosome CDS371675 2730 + 0.635165
NA Rfer_2249 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS2462813 1923 + 0.549142
NA Rfer_0517 peptidase M48, Ste24pchromosome CDS540292 846 + 0.638298
NA Rfer_0429 heat shock protein DnaJ-likechromosome CDS436356 336 + 0.619048
NA Rfer_3354 putative thioredoxin-related transmembrane proteinchromosome CDS3724717 567 - 0.573192
NA Rfer_3343 cytochrome c assembly proteinchromosome CDS3710578 804 + 0.624378
NA Rfer_2645 fkbp-type peptidyl-prolyl cis-trans isomerasechromosome CDS2910823 534 + 0.593633
NA Rfer_4097 (NiFe) hydrogenase maturation protein HypFchromosome CDS4570277 2370 + 0.651055
NA Rfer_2234 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS2448776 564 - 0.579787
NA Rfer_1537 heat shock protein Hsp20chromosome CDS1654306 429 - 0.578089
NA Rfer_2462 FAD-dependent pyridine nucleotide-disulphide oxidoreductasechromosome CDS2709871 1065 + 0.578404
NA Rfer_2379 glutaredoxin family proteinchromosome CDS2619845 393 - 0.562341
NA Rfer_1909 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS2050413 519 - 0.541426
NA Rfer_4096 hydrogenase accessory protein HypBchromosome CDS4569342 939 + 0.609159
NA Rfer_2711 transposase IS66chromosome CDS2983074 1521 + 0.586456
NA Rfer_3406 UreE urease accessory-likechromosome CDS3790195 525 + 0.651429
NA Rfer_2300 HflK proteinchromosome CDS2522829 1395 - 0.582796
NA Rfer_1968 Chaperone DnaJchromosome CDS2113675 1140 - 0.6
NA Rfer_2399 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS2641733 786 + 0.544529
NA Rfer_1739 Peptidase S1C, Dochromosome CDS1874317 1482 + 0.575574
NA Rfer_2181 Fe-S protein assembly chaperone HscAchromosome CDS2378809 1857 + 0.58643
NA Rfer_0500 DNA repair protein RadAchromosome CDS518783 1365 + 0.648352
NA Rfer_0044 heme exporter protein CcmBchromosome CDS47062 684 - 0.621345
NA Rfer_0943 putative thioredoxinchromosome CDS993425 339 + 0.60177
NA Rfer_3376 Urease accessory protein UreDchromosome CDS3751991 831 - 0.629362
NA Rfer_2759 ATPase AAA-2chromosome CDS3046963 2328 - 0.542955
NA Rfer_0831 ATP-dependent protease, putativechromosome CDS868425 2436 - 0.606322
NA Rfer_1345 Peptidylprolyl isomerasechromosome CDS1448351 507 - 0.556213
NA Rfer_0791 ATPasechromosome CDS827993 1359 + 0.665195
NA Rfer_0198 thioredoxinchromosome CDS196037 981 + 0.604485
NA Rfer_0743 conserved hypothetical proteinchromosome CDS780374 471 - 0.617834
NA Rfer_1948 molecular chaperone, Hsp70 classchromosome CDS2091229 1257 + 0.6428
NA Rfer_0574 OsmC-like proteinchromosome CDS595878 429 + 0.601399
NA Rfer_1385 peptidase U32chromosome CDS1498039 1359 + 0.626196
NA Rfer_0136 peptidase U32chromosome CDS139829 1098 - 0.612022
NA Rfer_2104 Disulphide bond formation protein DsbBchromosome CDS2277289 525 + 0.573333
NA Rfer_1277 putative fkbp-type peptidyl-prolyl cis-trans isomerasechromosome CDS1369535 477 + 0.597484
NA Rfer_3388 OsmC-like proteinchromosome CDS3765399 489 - 0.644172
NA Rfer_2881 hypothetical proteinchromosome CDS3183409 1737 - 0.607369
NA Rfer_0359 putative conserved integral membrane proteinchromosome CDS360780 672 - 0.614583
NA Rfer_0641 heat shock protein DnaJ-likechromosome CDS664108 309 - 0.627832
NA Rfer_4050 glutathione S-transferase-likechromosome CDS4514794 615 + 0.603252
NA Rfer_0786 Isoprenylcysteine carboxyl methyltransferasechromosome CDS825602 666 + 0.614114
NA Rfer_1554 ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS1676888 630 + 0.546032
NA Rfer_2602 Protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS2867327 654 + 0.587156
NA Rfer_2546 SsrA-binding proteinchromosome CDS2807104 474 + 0.552743
NA Rfer_2349 Leucyltransferasechromosome CDS2582188 765 - 0.585621
NA Rfer_4099 hydrogenase expression/formation protein HypDchromosome CDS4572854 1131 + 0.6145
NA Rfer_2124 band 7 proteinchromosome CDS2301060 912 - 0.572368
NA Rfer_2011 ATP-dependent metalloprotease FtsHchromosome CDS2167362 1920 + 0.563542
NA Rfer_2414 peptidase U32chromosome CDS2656842 2019 + 0.609212
NA Rfer_2348 Arginyltransferasechromosome CDS2581416 762 - 0.530184
NA Rfer_3179 thioredoxin reductasechromosome CDS3517340 951 + 0.616193
NA Rfer_0177 hypothetical proteinchromosome CDS177400 519 + 0.516378
NA Rfer_2149 protein of unknown function DUF107chromosome CDS2332889 1467 + 0.648943
NA Rfer_2652 Hsp33 proteinchromosome CDS2917440 990 - 0.60101
NA Rfer_2252 putative thiol:disulfide interchange proteinchromosome CDS2466074 816 + 0.631127
NA Rfer_3407 Urease accessory protein UreFchromosome CDS3790723 678 + 0.620944
NA Rfer_1411 Ste24 endopeptidasechromosome CDS1519376 1278 - 0.604851
NA Rfer_3267 glutathione S-transferase-likechromosome CDS3621665 621 - 0.584541
NA Rfer_3006 ATP-dependent protease Lachromosome CDS3312698 2394 + 0.62782
NA Rfer_0041 CcmE/CycJ proteinchromosome CDS45719 444 - 0.583333
NA Rfer_1089 glutathione S-transferase-likechromosome CDS1165050 684 + 0.615497
NA Rfer_3249 peptidylprolyl isomerase, FKBP-typechromosome CDS3600902 465 - 0.610753
NA Rfer_0135 peptidase U32chromosome CDS138799 909 - 0.620462
NA Rfer_3555 glutathione S-transferase-likechromosome CDS3955599 639 - 0.624413
NA Rfer_0038 cytochrome C biogenesis proteinchromosome CDS42750 468 - 0.594017
NA Rfer_1132 chaperonin Cpn10chromosome CDS1216185 291 - 0.549828
NA Rfer_3435 heat shock protein HslVU, ATPase subunit HslUchromosome CDS3823597 1323 - 0.577475
NA Rfer_4041 peptidase M48, Ste24pchromosome CDS4506899 1647 + 0.692168
NA Rfer_0871 pyrrolidone-carboxylate peptidasechromosome CDS909177 669 - 0.671151
NA Rfer_0381 hypothetical proteinchromosome CDS390864 501 + 0.644711
NA Rfer_0484 Glutathione peroxidasechromosome CDS501026 486 - 0.592593
NA Rfer_0832 Heat shock protein 70chromosome CDS870857 1902 - 0.629338