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2024-05-19 09:05:12

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Frankia sp. CcI3, CcI3

Number of genes found: 125

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Frankia sp. CcI3, CcI3
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Francci3_0447 thioredoxin-relatedSubName: Full=Thioredoxin-related; chromosome CDS528774 441 + 0.696145
NA Francci3_1946 hydrogenase assembly chaperone hypC/hupFSubName: Full=Hydrogenase assembly chaperone hypC/hupF; chromosome CDS2287415 303 + 0.69637
NA Francci3_2171 heat shock protein DnaJ-likeSubName: Full=Heat shock protein DnaJ-like; chromosome CDS2543475 1008 - 0.749008
NA Francci3_1204 trigger factorRecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; chromosome CDS1436871 1452 + 0.702479
NA Francci3_0627 peptidase M22, glycoproteaseSubName: Full=Peptidase M22, glycoprotease; chromosome CDS711715 765 + 0.750327
NA Francci3_4418 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5283656 906 - 0.728477
NA Francci3_0339 heat shock protein DnaJ-likeSubName: Full=Heat shock protein DnaJ-like; chromosome CDS392906 591 - 0.739425
NA Francci3_3673 Heat shock protein 70SubName: Full=Heat shock protein 70; chromosome CDS4404196 1671 - 0.690604
NA Francci3_2630 Vesicle-fusing ATPaseRecName: Full=Proteasome-associated ATPase; AltName: Full=AAA ATPase forming ring-shaped complexes; Short=ARC; AltName: Full=Proteasomal ATPase; chromosome CDS3103680 1809 - 0.645661
NA Francci3_3316 protein-L-isoaspartate(D-aspartate)O-methyltrans feraseSubName: Full=Protein-L-isoaspartate(D-aspartate) O-methyltransferase; chromosome CDS3930523 1296 - 0.67284
NA Francci3_2906 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3421833 624 - 0.661859
NA Francci3_1069 Hydrogenase expression/formation protein HypESubName: Full=Hydrogenase expression/formation protein HypE; chromosome CDS1273235 1062 - 0.755179
NA Francci3_3830 peptidase S1 and S6, chymotrypsin/HapSubName: Full=Peptidase S1 and S6, chymotrypsin/Hap; chromosome CDS4591139 1548 - 0.74031
NA Francci3_1819 Protein-L-isoaspartate(D-aspartate)O-methyltrans feraseSubName: Full=Protein-L-isoaspartate(D-aspartate) O-methyltransferase; EC=2.1.1.77; chromosome CDS2154800 1233 + 0.709651
NA Francci3_2172 GrpE proteinRecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; chromosome CDS2544489 675 - 0.758519
NA Francci3_1653 cytochrome oxidase assemblySubName: Full=Cytochrome oxidase assembly; chromosome CDS1986856 1029 - 0.735666
NA Francci3_0913 DSBA oxidoreductaseSubName: Full=DSBA oxidoreductase; chromosome CDS1056755 813 - 0.693727
NA Francci3_3741 LeucyltransferaseRecName: Full=Leucyl/phenylalanyl-tRNA--protein transferase; EC=2.3.2.6; AltName: Full=L/F-transferase; AltName: Full=Leucyltransferase; AltName: Full=Phenyalanyltransferase; chromosome CDS4477932 786 + 0.731552
NA Francci3_1072 (NiFe) hydrogenase maturation protein HypFSubName: Full=(NiFe) hydrogenase maturation protein HypF; chromosome CDS1275677 2547 - 0.755791
NA Francci3_1988 peptidase S1 and S6, chymotrypsin/HapSubName: Full=Peptidase S1 and S6, chymotrypsin/Hap; Flags: Precursor; chromosome CDS2334887 1044 + 0.704023
NA Francci3_2942 ADP-ribosylation/Crystallin J1SubName: Full=ADP-ribosylation/Crystallin J1; chromosome CDS3475595 900 + 0.732222
NA Francci3_2662 metalloendopeptidase, putative, glycoprotease familyRecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; chromosome CDS3142594 1071 + 0.747899
NA Francci3_2173 Chaperone DnaKRecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; chromosome CDS2545187 1926 - 0.699896
NA Francci3_3531 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4219563 1284 + 0.709502
NA Francci3_3969 glycosyl transferase, family 39SubName: Full=Glycosyl transferase, family 39; chromosome CDS4748950 1710 + 0.718713
NA Francci3_0801 SsrA-binding proteinRecName: Full=SsrA-binding protein; chromosome CDS932973 480 + 0.683333
NA Francci3_1660 FeS assembly protein SufBSubName: Full=Iron-regulated ABC transporter membrane component SufB; chromosome CDS1994453 1413 + 0.666667
NA Francci3_1938 hydrogenase accessory protein HypBSubName: Full=Hydrogenase accessory protein HypB; chromosome CDS2277083 852 + 0.700704
NA Francci3_1663 FeS assembly ATPase SufCSubName: Full=FeS assembly ATPase SufC; chromosome CDS1997507 795 + 0.684277
NA Francci3_0896 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1038263 798 + 0.718045
NA Francci3_2626 20S proteasome, A and B subunitsRecName: Full=Proteasome subunit alpha; EC=3.4.25.1; AltName: Full=20S proteasome alpha subunit; AltName: Full=Proteasome core protein PrcA; chromosome CDS3099521 717 - 0.684798
NA Francci3_3793 Glutaredoxin-like protein GlrXSubName: Full=Glutaredoxin-like protein GlrX; chromosome CDS4545923 240 + 0.591667
NA Francci3_0092 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS110569 3609 - 0.74813
NA Francci3_1661 FeS assembly protein SufDSubName: Full=Iron-regulated ABC transporter permease protein SufD; chromosome CDS1995865 1260 + 0.734921
NA Francci3_1526 ATPaseSubName: Full=ATPase; chromosome CDS1827916 1311 + 0.709382
NA Francci3_0830 putative urease accessory proteinRecName: Full=Urease accessory protein UreD; chromosome CDS969314 960 - 0.726042
NA Francci3_1070 hydrogenase expression/formation protein HypDSubName: Full=Hydrogenase expression/formation protein HypD; chromosome CDS1274289 1107 - 0.710027
NA Francci3_1179 heat shock protein Hsp20SubName: Full=Heat shock protein Hsp20; chromosome CDS1410574 588 + 0.722789
NA Francci3_0831 putative urease accessory proteinSubName: Full=Putative urease accessory protein; chromosome CDS970416 798 - 0.755639
NA Francci3_3900 protein of unknown function DUF255SubName: Full=Uncharacterized protein; chromosome CDS4664721 2022 - 0.732443
NA Francci3_4292 Colicin V production proteinSubName: Full=Colicin V production protein; chromosome CDS5122032 1185 + 0.705485
NA Francci3_3053 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenSubName: Full=Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; chromosome CDS3619491 459 - 0.653595
NA Francci3_0243 heat shock protein Hsp90RecName: Full=Chaperone protein HtpG; AltName: Full=Heat shock protein HtpG; AltName: Full=High temperature protein G; chromosome CDS281268 1953 + 0.665643
NA Francci3_4258 DNA repair protein RadARecName: Full=DNA repair protein radA; chromosome CDS5079510 1458 + 0.727709
NA Francci3_2773 Endopeptidase ClpRecName: Full=ATP-dependent Clp protease proteolytic subunit 3; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 3; chromosome CDS3269865 675 - 0.660741
NA Francci3_0254 peptidase M48, Ste24pSubName: Full=Peptidase M48, Ste24p; Flags: Precursor; chromosome CDS293551 1224 - 0.736928
NA Francci3_1079 hydrogenase accessory protein HypBSubName: Full=Hydrogenase accessory protein HypB; chromosome CDS1284931 894 + 0.715884
NA Francci3_3924 peptidase S49SubName: Full=Signal peptide peptidase A. Serine peptidase. MEROPS family S49; chromosome CDS4692124 2049 - 0.733041
NA Francci3_3945 peptidase S8 and S53, subtilisin, kexin, sedolisinSubName: Full=Peptidase S8 and S53, subtilisin, kexin, sedolisin; Flags: Precursor; chromosome CDS4722728 1344 + 0.752232
NA Francci3_0028 OsmC-like proteinSubName: Full=OsmC-like protein; chromosome CDS34525 429 - 0.675991
NA Francci3_0295 heat shock protein DnaJ-likeSubName: Full=Heat shock protein DnaJ-like; chromosome CDS342024 1155 - 0.715151
NA Francci3_2663 urease accessory protein UreGRecName: Full=Urease accessory protein UreG; chromosome CDS3143701 750 + 0.708
NA Francci3_0513 cytochrome c assembly proteinSubName: Full=Cytochrome c assembly protein; chromosome CDS599071 1194 + 0.713568
NA Francci3_1948 Hydrogenase expression/formation protein HypESubName: Full=Hydrogenase expression/formation protein HypE; chromosome CDS2288912 1080 + 0.70463
NA Francci3_1352 band 7 proteinSubName: Full=SPFH domain, Band 7 family protein; Flags: Precursor; chromosome CDS1625510 945 + 0.689947
NA Francci3_3001 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3555292 663 - 0.71644
NA Francci3_4314 ATP-dependent metalloprotease FtsHRecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; Flags: Precursor; chromosome CDS5154370 2262 + 0.678603
NA Francci3_3672 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4400225 3564 - 0.753648
NA Francci3_1071 hydrogenase assembly chaperone hypC/hupFSubName: Full=Hydrogenase assembly chaperone hypC/hupF; chromosome CDS1275392 282 - 0.691489
NA Francci3_4353 GrpE proteinRecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; chromosome CDS5199015 816 + 0.738971
NA Francci3_0912 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenSubName: Full=Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; chromosome CDS1056109 492 - 0.678862
NA Francci3_3380 conserved hypothetical proteinRecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG synthase; EC=4.3.99.3; AltName: Full=Queuosine biosynthesis protein QueE; chromosome CDS4010461 639 + 0.710485
NA Francci3_4354 chaperone DnaJ-likeRecName: Full=Chaperone protein DnaJ; chromosome CDS5199933 1191 + 0.720403
NA Francci3_0921 chaperonin Cpn10RecName: Full=10 kDa chaperonin; chromosome CDS1064675 441 + 0.69161
NA Francci3_2627 20S proteasome, A and B subunitsRecName: Full=Proteasome subunit beta; EC=3.4.25.1; AltName: Full=20S proteasome beta subunit; AltName: Full=Proteasome core protein PrcB; Flags: Precursor; chromosome CDS3100245 915 - 0.68306
NA Francci3_1947 hydrogenase expression/formation protein HypDSubName: Full=Hydrogenase expression/formation protein HypD; chromosome CDS2287714 1209 + 0.690653
NA Francci3_4352 Chaperone DnaKRecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; chromosome CDS5197168 1851 + 0.678552
NA Francci3_3683 thioredoxin-relatedSubName: Full=Thioredoxin-related; Flags: Precursor; chromosome CDS4419288 990 - 0.747475
NA Francci3_1042 Endopeptidase LaSubName: Full=Endopeptidase La; EC=3.4.21.53; chromosome CDS1238126 801 - 0.746567
NA Francci3_2789 ATPase AAA-2SubName: Full=ATPase AAA-2; chromosome CDS3282367 2643 + 0.710935
NA Francci3_2855 Polyketide synthesis cyclaseSubName: Full=Polyketide synthesis cyclase; chromosome CDS3364932 390 - 0.625641
NA Francci3_0069 peptidase S1 and S6, chymotrypsin/HapSubName: Full=Peptidase S1 and S6, chymotrypsin/Hap; chromosome CDS86820 1740 - 0.698851
NA Francci3_4490 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5362755 438 + 0.648402
NA Francci3_4158 transcriptional regulator, XRE familySubName: Full=Transcriptional regulator, XRE family; chromosome CDS4959583 1212 - 0.603135
NA Francci3_4383 ATPase AAA-2SubName: Full=ATPase AAA-2; chromosome CDS5232309 2505 + 0.673852
NA Francci3_2611 peptidylprolyl isomerase, FKBP-typeRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; Flags: Precursor; chromosome CDS3081834 708 - 0.764124
NA Francci3_4398 chaperonin GroELRecName: Full=60 kDa chaperonin 4; AltName: Full=GroEL protein 4; AltName: Full=Protein Cpn60 4; chromosome CDS5256902 1623 + 0.671596
NA Francci3_0510 putative secreted proteinSubName: Full=Putative secreted protein; Flags: Precursor; chromosome CDS595361 630 + 0.71746
NA Francci3_3144 Glutamate-ammonia-ligase adenylyltransferaseRecName: Full=Glutamate-ammonia-ligase adenylyltransferase; EC=2.7.7.42; AltName: Full=Glutamine-synthase adenylyltransferase; AltName: Full=[Glutamate--ammonia-ligase] adenylyltransferase; chromosome CDS3718202 3204 - 0.751248
NA Francci3_4465 OsmC-like proteinSubName: Full=OsmC-like protein; chromosome CDS5337374 747 - 0.702811
NA Francci3_1945 (NiFe) hydrogenase maturation protein HypFSubName: Full=(NiFe) hydrogenase maturation protein HypF; chromosome CDS2284957 2451 + 0.74337
NA Francci3_3406 AAA ATPase, central regionSubName: Full=AAA ATPase, central region; chromosome CDS4040632 1338 + 0.713004
NA Francci3_2174 heat shock protein Hsp20SubName: Full=Heat shock protein Hsp20; chromosome CDS2547669 510 + 0.67451
NA Francci3_4356 ATPase AAA-2SubName: Full=ATPase AAA-2; chromosome CDS5201861 2610 + 0.711877
NA Francci3_2392 protein of unknown function DUF182SubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS2770221 1278 - 0.742567
NA Francci3_1351 protein of unknown function DUF107SubName: Full=Uncharacterized protein; chromosome CDS1624948 435 + 0.689655
NA Francci3_3674 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4405907 1380 - 0.725362
NA Francci3_1059 Glutathione peroxidaseRecName: Full=Glutathione peroxidase; chromosome CDS1261160 537 + 0.648045
NA Francci3_2175 chaperonin GroELRecName: Full=60 kDa chaperonin 2; AltName: Full=GroEL protein 2; AltName: Full=Protein Cpn60 2; chromosome CDS2548390 1626 + 0.661132
NA Francci3_0633 chaperonin GroELRecName: Full=60 kDa chaperonin 1; AltName: Full=GroEL protein 1; AltName: Full=Protein Cpn60 1; chromosome CDS715686 1641 + 0.687995
NA Francci3_4467 Protein-L-isoaspartate(D-aspartate)O-methyltrans feraseSubName: Full=Protein-L-isoaspartate(D-aspartate) O-methyltransferase; EC=2.1.1.77; chromosome CDS5339193 1203 + 0.720698
NA Francci3_0530 FAD-dependent pyridine nucleotide-disulphide oxidoreductaseRecName: Full=Ferredoxin--NADP reductase; Short=FNR; Short=Fd-NADP(+) reductase; EC=1.18.1.2; chromosome CDS615191 966 - 0.698758
NA Francci3_1649 protoheme IX farnesyltransferaseRecName: Full=Protoheme IX farnesyltransferase; EC=2.5.1.-; AltName: Full=Heme B farnesyltransferase; AltName: Full=Heme O synthase; chromosome CDS1983653 870 + 0.694253
NA Francci3_1128 Protein-L-isoaspartate(D-aspartate)O-methyltrans feraseSubName: Full=Protein-L-isoaspartate(D-aspartate) O-methyltransferase; EC=2.1.1.77; chromosome CDS1344035 1167 - 0.712939
NA Francci3_3895 peptide methionine sulfoxide reductaseRecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; chromosome CDS4657697 702 - 0.700855
NA Francci3_1205 Endopeptidase ClpRecName: Full=ATP-dependent Clp protease proteolytic subunit 1; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 1; chromosome CDS1438658 642 + 0.657321
NA Francci3_0511 cytochrome c biogenesis protein, transmembrane regionSubName: Full=Cytochrome c biogenesis protein, transmembrane region; Flags: Precursor; chromosome CDS596025 936 + 0.736111
NA Francci3_3050 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3616307 1314 + 0.681126
NA Francci3_2034 Protein-L-isoaspartate(D-aspartate)O-methyltrans feraseSubName: Full=Protein-L-isoaspartate(D-aspartate) O-methyltransferase; EC=2.1.1.77; chromosome CDS2394076 1227 - 0.674817
NA Francci3_3487 AAA ATPase, central regionSubName: Full=AAA ATPase, central region; chromosome CDS4156839 2484 - 0.687198
NA Francci3_1047 Endopeptidase LaSubName: Full=Endopeptidase La; EC=3.4.21.53; chromosome CDS1241014 390 - 0.728205
NA Francci3_2230 peptidase M48, Ste24pRecName: Full=Protease HtpX homolog; EC=3.4.24.-; Flags: Precursor; chromosome CDS2602266 969 + 0.72033
NA Francci3_2513 chaperonin GroELRecName: Full=60 kDa chaperonin 3; AltName: Full=GroEL protein 3; AltName: Full=Protein Cpn60 3; chromosome CDS2969278 1650 - 0.667879
NA Francci3_1920 heat shock protein Hsp20SubName: Full=Heat shock protein Hsp20; chromosome CDS2257111 489 + 0.674847
NA Francci3_0632 chaperonin Cpn10RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; chromosome CDS715256 306 + 0.660131
NA Francci3_1207 ATP-dependent Clp protease, ATP-binding subunit ClpXRecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; chromosome CDS1440399 1287 + 0.639472
NA Francci3_2774 Endopeptidase ClpRecName: Full=ATP-dependent Clp protease proteolytic subunit 4; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 4; chromosome CDS3270536 717 - 0.680614
NA Francci3_4477 HesB/YadR/YfhFSubName: Full=HesB/YadR/YfhF; chromosome CDS5349179 621 - 0.714976
NA Francci3_2268 Protein-methionine-S-oxide reductaseRecName: Full=Peptide methionine sulfoxide reductase MsrB; EC=1.8.4.12; AltName: Full=Peptide-methionine (R)-S-oxide reductase; chromosome CDS2646457 420 - 0.685714
NA Francci3_1265 Chaperone DnaJRecName: Full=Chaperone protein DnaJ; chromosome CDS1511373 1140 + 0.718421
NA Francci3_1206 Endopeptidase ClpRecName: Full=ATP-dependent Clp protease proteolytic subunit 2; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 2; chromosome CDS1439356 681 + 0.647577
NA Francci3_3244 protein-L-isoaspartate(D-aspartate)O-methyltrans feraseSubName: Full=Protein-L-isoaspartate(D-aspartate) O-methyltransferase; chromosome CDS3838808 1068 + 0.692884
NA Francci3_1381 peptidyl-prolyl cis-trans isomerase, cyclophilin typeSubName: Full=Peptidyl-prolyl cis-trans isomerase, cyclophilin type; Flags: Precursor; chromosome CDS1660019 879 - 0.713311
NA Francci3_0420 UTP-GlnB (protein PII) uridylyltransferase, GlnDRecName: Full=Bifunctional uridylyltransferase/uridylyl-removing enzyme; Short=UTase/UR; AltName: Full=Bifunctional [protein-PII] modification enzyme; AltName: Full=Bifunctional nitrogen sensor protein; chromosome CDS498762 2358 - 0.733673
NA Francci3_0483 glutaredoxin 2SubName: Full=Glutaredoxin 2; chromosome CDS565223 312 + 0.727564
NA Francci3_1753 Radical SAMRecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG synthase; EC=4.3.99.3; AltName: Full=Queuosine biosynthesis protein QueE; chromosome CDS2084720 756 - 0.68254
NA Francci3_4536 thioredoxin reductaseRecName: Full=Thioredoxin reductase; EC=1.8.1.9; chromosome CDS5420431 1047 + 0.690544
NA Francci3_4444 Peptidylprolyl isomeraseRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS5311812 528 - 0.666667
NA Francci3_3585 Mg chelatase-related proteinSubName: Full=Mg chelatase-related protein; chromosome CDS4285320 1536 - 0.723958
NA Francci3_4537 thioredoxinRecName: Full=Thioredoxin; chromosome CDS5421632 327 + 0.626911
NA Francci3_0512 ResB-likeSubName: Full=ResB-like; Flags: Precursor; chromosome CDS596957 2115 + 0.711584
NA Francci3_1943 nitrogen-fixing NifU-likeSubName: Full=Nitrogen-fixing NifU-like; chromosome CDS2283285 576 + 0.739583
NA Francci3_3210 peptidase A24A, prepilin type IVSubName: Full=Peptidase A24A, prepilin type IV; Flags: Precursor; chromosome CDS3802872 657 - 0.750381
NA Francci3_3863 peptidase S1 and S6, chymotrypsin/HapSubName: Full=Peptidase S1 and S6, chymotrypsin/Hap; chromosome CDS4625704 1005 - 0.742289
NA Francci3_0557 peptidase M48, Ste24pRecName: Full=Protease HtpX homolog; EC=3.4.24.-; Flags: Precursor; chromosome CDS648954 873 + 0.657503