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2024-05-06 08:51:24

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Frankia sp. CcI3, CcI3

Number of genes found: 125

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Frankia sp. CcI3, CcI3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Francci3_0295 heat shock protein DnaJ-likechromosome CDS342024 1155 - 0.715151
NA Francci3_2175 chaperonin GroELchromosome CDS2548390 1626 + 0.661132
NA Francci3_1351 protein of unknown function DUF107chromosome CDS1624948 435 + 0.689655
NA Francci3_0831 putative urease accessory proteinchromosome CDS970416 798 - 0.755639
NA Francci3_1204 trigger factorchromosome CDS1436871 1452 + 0.702479
NA Francci3_4467 Protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS5339193 1203 + 0.720698
NA Francci3_2663 urease accessory protein UreGchromosome CDS3143701 750 + 0.708
NA Francci3_0632 chaperonin Cpn10chromosome CDS715256 306 + 0.660131
NA Francci3_0912 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS1056109 492 - 0.678862
NA Francci3_1265 Chaperone DnaJchromosome CDS1511373 1140 + 0.718421
NA Francci3_2789 ATPase AAA-2chromosome CDS3282367 2643 + 0.710935
NA Francci3_3672 hypothetical proteinchromosome CDS4400225 3564 - 0.753648
NA Francci3_1938 hydrogenase accessory protein HypBchromosome CDS2277083 852 + 0.700704
NA Francci3_2230 peptidase M48, Ste24pchromosome CDS2602266 969 + 0.72033
NA Francci3_1381 peptidyl-prolyl cis-trans isomerase, cyclophilin typechromosome CDS1660019 879 - 0.713311
NA Francci3_0530 FAD-dependent pyridine nucleotide-disulphide oxidoreductasechromosome CDS615191 966 - 0.698758
NA Francci3_3487 AAA ATPase, central regionchromosome CDS4156839 2484 - 0.687198
NA Francci3_0512 ResB-likechromosome CDS596957 2115 + 0.711584
NA Francci3_1352 band 7 proteinchromosome CDS1625510 945 + 0.689947
NA Francci3_3863 peptidase S1 and S6, chymotrypsin/Hapchromosome CDS4625704 1005 - 0.742289
NA Francci3_3969 glycosyl transferase, family 39chromosome CDS4748950 1710 + 0.718713
NA Francci3_1206 Endopeptidase Clpchromosome CDS1439356 681 + 0.647577
NA Francci3_3793 Glutaredoxin-like protein GlrXchromosome CDS4545923 240 + 0.591667
NA Francci3_0830 putative urease accessory proteinchromosome CDS969314 960 - 0.726042
NA Francci3_3673 Heat shock protein 70chromosome CDS4404196 1671 - 0.690604
NA Francci3_1072 (NiFe) hydrogenase maturation protein HypFchromosome CDS1275677 2547 - 0.755791
NA Francci3_2513 chaperonin GroELchromosome CDS2969278 1650 - 0.667879
NA Francci3_0092 conserved hypothetical proteinchromosome CDS110569 3609 - 0.74813
NA Francci3_0028 OsmC-like proteinchromosome CDS34525 429 - 0.675991
NA Francci3_4536 thioredoxin reductasechromosome CDS5420431 1047 + 0.690544
NA Francci3_4258 DNA repair protein RadAchromosome CDS5079510 1458 + 0.727709
NA Francci3_4314 ATP-dependent metalloprotease FtsHchromosome CDS5154370 2262 + 0.678603
NA Francci3_1059 Glutathione peroxidasechromosome CDS1261160 537 + 0.648045
NA Francci3_1945 (NiFe) hydrogenase maturation protein HypFchromosome CDS2284957 2451 + 0.74337
NA Francci3_2611 peptidylprolyl isomerase, FKBP-typechromosome CDS3081834 708 - 0.764124
NA Francci3_0627 peptidase M22, glycoproteasechromosome CDS711715 765 + 0.750327
NA Francci3_0254 peptidase M48, Ste24pchromosome CDS293551 1224 - 0.736928
NA Francci3_1660 FeS assembly protein SufBchromosome CDS1994453 1413 + 0.666667
NA Francci3_3380 conserved hypothetical proteinchromosome CDS4010461 639 + 0.710485
NA Francci3_0801 SsrA-binding proteinchromosome CDS932973 480 + 0.683333
NA Francci3_1526 ATPasechromosome CDS1827916 1311 + 0.709382
NA Francci3_1920 heat shock protein Hsp20chromosome CDS2257111 489 + 0.674847
NA Francci3_4352 Chaperone DnaKchromosome CDS5197168 1851 + 0.678552
NA Francci3_3531 hypothetical proteinchromosome CDS4219563 1284 + 0.709502
NA Francci3_4354 chaperone DnaJ-likechromosome CDS5199933 1191 + 0.720403
NA Francci3_0420 UTP-GlnB (protein PII) uridylyltransferase, GlnDchromosome CDS498762 2358 - 0.733673
NA Francci3_0511 cytochrome c biogenesis protein, transmembrane regionchromosome CDS596025 936 + 0.736111
NA Francci3_2906 hypothetical proteinchromosome CDS3421833 624 - 0.661859
NA Francci3_1947 hydrogenase expression/formation protein HypDchromosome CDS2287714 1209 + 0.690653
NA Francci3_2174 heat shock protein Hsp20chromosome CDS2547669 510 + 0.67451
NA Francci3_3895 peptide methionine sulfoxide reductasechromosome CDS4657697 702 - 0.700855
NA Francci3_2034 Protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS2394076 1227 - 0.674817
NA Francci3_1042 Endopeptidase Lachromosome CDS1238126 801 - 0.746567
NA Francci3_4158 transcriptional regulator, XRE familychromosome CDS4959583 1212 - 0.603135
NA Francci3_3924 peptidase S49chromosome CDS4692124 2049 - 0.733041
NA Francci3_3900 protein of unknown function DUF255chromosome CDS4664721 2022 - 0.732443
NA Francci3_0243 heat shock protein Hsp90chromosome CDS281268 1953 + 0.665643
NA Francci3_1946 hydrogenase assembly chaperone hypC/hupFchromosome CDS2287415 303 + 0.69637
NA Francci3_0510 putative secreted proteinchromosome CDS595361 630 + 0.71746
NA Francci3_3741 Leucyltransferasechromosome CDS4477932 786 + 0.731552
NA Francci3_1069 Hydrogenase expression/formation protein HypEchromosome CDS1273235 1062 - 0.755179
NA Francci3_2942 ADP-ribosylation/Crystallin J1chromosome CDS3475595 900 + 0.732222
NA Francci3_2392 protein of unknown function DUF182chromosome CDS2770221 1278 - 0.742567
NA Francci3_1653 cytochrome oxidase assemblychromosome CDS1986856 1029 - 0.735666
NA Francci3_1070 hydrogenase expression/formation protein HypDchromosome CDS1274289 1107 - 0.710027
NA Francci3_4477 HesB/YadR/YfhFchromosome CDS5349179 621 - 0.714976
NA Francci3_3144 Glutamate-ammonia-ligase adenylyltransferasechromosome CDS3718202 3204 - 0.751248
NA Francci3_3210 peptidase A24A, prepilin type IVchromosome CDS3802872 657 - 0.750381
NA Francci3_3053 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS3619491 459 - 0.653595
NA Francci3_2171 heat shock protein DnaJ-likechromosome CDS2543475 1008 - 0.749008
NA Francci3_1948 Hydrogenase expression/formation protein HypEchromosome CDS2288912 1080 + 0.70463
NA Francci3_0483 glutaredoxin 2chromosome CDS565223 312 + 0.727564
NA Francci3_4444 Peptidylprolyl isomerasechromosome CDS5311812 528 - 0.666667
NA Francci3_1819 Protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS2154800 1233 + 0.709651
NA Francci3_3585 Mg chelatase-related proteinchromosome CDS4285320 1536 - 0.723958
NA Francci3_4490 hypothetical proteinchromosome CDS5362755 438 + 0.648402
NA Francci3_1128 Protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS1344035 1167 - 0.712939
NA Francci3_3683 thioredoxin-relatedchromosome CDS4419288 990 - 0.747475
NA Francci3_1753 Radical SAMchromosome CDS2084720 756 - 0.68254
NA Francci3_4465 OsmC-like proteinchromosome CDS5337374 747 - 0.702811
NA Francci3_4356 ATPase AAA-2chromosome CDS5201861 2610 + 0.711877
NA Francci3_1661 FeS assembly protein SufDchromosome CDS1995865 1260 + 0.734921
NA Francci3_1205 Endopeptidase Clpchromosome CDS1438658 642 + 0.657321
NA Francci3_1179 heat shock protein Hsp20chromosome CDS1410574 588 + 0.722789
NA Francci3_2662 metalloendopeptidase, putative, glycoprotease familychromosome CDS3142594 1071 + 0.747899
NA Francci3_0513 cytochrome c assembly proteinchromosome CDS599071 1194 + 0.713568
NA Francci3_4383 ATPase AAA-2chromosome CDS5232309 2505 + 0.673852
NA Francci3_0921 chaperonin Cpn10chromosome CDS1064675 441 + 0.69161
NA Francci3_0447 thioredoxin-relatedchromosome CDS528774 441 + 0.696145
NA Francci3_3050 hypothetical proteinchromosome CDS3616307 1314 + 0.681126
NA Francci3_1079 hydrogenase accessory protein HypBchromosome CDS1284931 894 + 0.715884
NA Francci3_4398 chaperonin GroELchromosome CDS5256902 1623 + 0.671596
NA Francci3_0913 DSBA oxidoreductasechromosome CDS1056755 813 - 0.693727
NA Francci3_3244 protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS3838808 1068 + 0.692884
NA Francci3_3945 peptidase S8 and S53, subtilisin, kexin, sedolisinchromosome CDS4722728 1344 + 0.752232
NA Francci3_3406 AAA ATPase, central regionchromosome CDS4040632 1338 + 0.713004
NA Francci3_1663 FeS assembly ATPase SufCchromosome CDS1997507 795 + 0.684277
NA Francci3_1207 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome CDS1440399 1287 + 0.639472
NA Francci3_2630 Vesicle-fusing ATPasechromosome CDS3103680 1809 - 0.645661
NA Francci3_3001 hypothetical proteinchromosome CDS3555292 663 - 0.71644
NA Francci3_2173 Chaperone DnaKchromosome CDS2545187 1926 - 0.699896
NA Francci3_3830 peptidase S1 and S6, chymotrypsin/Hapchromosome CDS4591139 1548 - 0.74031
NA Francci3_2268 Protein-methionine-S-oxide reductasechromosome CDS2646457 420 - 0.685714
NA Francci3_1047 Endopeptidase Lachromosome CDS1241014 390 - 0.728205
NA Francci3_2773 Endopeptidase Clpchromosome CDS3269865 675 - 0.660741
NA Francci3_0069 peptidase S1 and S6, chymotrypsin/Hapchromosome CDS86820 1740 - 0.698851
NA Francci3_4537 thioredoxinchromosome CDS5421632 327 + 0.626911
NA Francci3_1071 hydrogenase assembly chaperone hypC/hupFchromosome CDS1275392 282 - 0.691489
NA Francci3_3674 hypothetical proteinchromosome CDS4405907 1380 - 0.725362
NA Francci3_1943 nitrogen-fixing NifU-likechromosome CDS2283285 576 + 0.739583
NA Francci3_3316 protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS3930523 1296 - 0.67284
NA Francci3_0557 peptidase M48, Ste24pchromosome CDS648954 873 + 0.657503
NA Francci3_2626 20S proteasome, A and B subunitschromosome CDS3099521 717 - 0.684798
NA Francci3_2774 Endopeptidase Clpchromosome CDS3270536 717 - 0.680614
NA Francci3_4292 Colicin V production proteinchromosome CDS5122032 1185 + 0.705485
NA Francci3_0339 heat shock protein DnaJ-likechromosome CDS392906 591 - 0.739425
NA Francci3_0633 chaperonin GroELchromosome CDS715686 1641 + 0.687995
NA Francci3_4353 GrpE proteinchromosome CDS5199015 816 + 0.738971
NA Francci3_1988 peptidase S1 and S6, chymotrypsin/Hapchromosome CDS2334887 1044 + 0.704023
NA Francci3_4418 hypothetical proteinchromosome CDS5283656 906 - 0.728477
NA Francci3_1649 protoheme IX farnesyltransferasechromosome CDS1983653 870 + 0.694253
NA Francci3_2855 Polyketide synthesis cyclasechromosome CDS3364932 390 - 0.625641
NA Francci3_2627 20S proteasome, A and B subunitschromosome CDS3100245 915 - 0.68306
NA Francci3_2172 GrpE proteinchromosome CDS2544489 675 - 0.758519
NA Francci3_0896 conserved hypothetical proteinchromosome CDS1038263 798 + 0.718045