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2024-05-07 14:15:50

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Novosphingobium aromaticivorans DSM 12444, DSM 12444

Number of genes found: 137

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Novosphingobium aromaticivorans DSM 12444, DSM 12444
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Saro_0987 peptidase M22, glycoproteasechromosome CDS1029346 621 - 0.673108
NA Saro_2014 heat shock protein Hsp20chromosome CDS2146285 462 + 0.651515
NA Saro_0195 FeS assembly protein SufBchromosome CDS201786 1482 + 0.626856
NA Saro_0988 nitrogen-fixing NifU-likechromosome CDS1029983 588 - 0.646259
NA Saro_0989 peptidylprolyl isomerase, FKBP-typechromosome CDS1030696 564 + 0.687943
NA Saro_2398 peptidase S1 and S6, chymotrypsin/Hapchromosome CDS2564711 1596 + 0.682957
NA Saro_2872 glutathione S-transferase-likechromosome CDS3096062 786 - 0.676845
NA Saro_2841 ATP12 ATPasechromosome CDS3066140 693 + 0.678211
NA Saro_2167 hypothetical proteinchromosome CDS2304768 1116 + 0.639785
NA Saro_1837 peptidase S8 and S53, subtilisin, kexin, sedolisinchromosome CDS1935151 2313 + 0.699957
NA Saro_2053 Chaperone DnaJchromosome CDS2194213 1137 - 0.663149
NA Saro_2059 GrpE proteinchromosome CDS2199768 561 - 0.655971
NA Saro_0917 cytochrome c oxidase assembly protein CtaG/Cox11chromosome CDS970439 630 + 0.642857
NA Saro_2910 heat shock protein DnaJ-likechromosome CDS3129100 591 - 0.683587
NA Saro_2900 protein of unknown function DUF306, Meta and HslJchromosome CDS3118903 402 - 0.68408
NA Saro_2873 glutathione S-transferase-likechromosome CDS3096844 771 - 0.619974
NA Saro_2635 20S proteasome, A and B subunitschromosome CDS2872135 558 - 0.645161
NA Saro_2785 metalloendopeptidase, putative, glycoprotease familychromosome CDS3005420 1053 - 0.679962
NA Saro_0198 SufBDchromosome CDS204680 735 + 0.685714
NA Saro_0401 protein of unknown function DUF107chromosome CDS440475 1383 + 0.643529
NA Saro_3314 heat shock protein Hsp70chromosome CDS3536777 1707 - 0.685413
NA Saro_2887 glutathione S-transferase-likechromosome CDS3108322 681 - 0.656388
NA Saro_3317 heat shock protein DnaJ-likechromosome CDS3541039 297 - 0.723906
NA Saro_2595 glutathione S-transferase-likechromosome CDS2803495 867 + 0.634371
NA Saro_0888 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS943788 1371 - 0.665208
NA Saro_0966 peptidyl-prolyl cis-trans isomerase, cyclophilin typechromosome CDS1012810 456 + 0.644737
NA Saro_2251 Peptidylprolyl isomerasechromosome CDS2391325 699 - 0.638054
NA Saro_0455 hypothetical proteinchromosome CDS499747 612 - 0.656863
NA Saro_0945 Isoprenylcysteine carboxyl methyltransferasechromosome CDS993110 1335 + 0.666667
NA Saro_0054 Disulphide bond formation protein DsbBchromosome CDS55939 483 - 0.674948
NA Saro_2631 ABC transporter relatedchromosome CDS2868163 1827 + 0.64532
NA Saro_2824 AAA ATPase, central regionchromosome CDS3048765 2580 - 0.668992
NA Saro_2847 Radical SAMchromosome CDS3073305 744 + 0.680108
NA Saro_2315 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS2455619 555 - 0.652252
NA Saro_2004 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS2139107 480 + 0.64375
NA Saro_1718 pyridine nucleotide-disulphide oxidoreductase, class-II, active sitechromosome CDS1805578 1560 + 0.653846
NA Saro_2702 hypothetical proteinchromosome CDS2938885 345 - 0.634783
NA Saro_2762 glutathione S-transferase-likechromosome CDS2981469 621 + 0.647343
NA Saro_0049 heat shock protein DnaJ-likechromosome CDS51839 978 + 0.674847
NA Saro_3332 band 7 proteinchromosome CDS3552814 852 - 0.642019
NA Saro_3328 Protein-methionine-S-oxide reductasechromosome CDS3548061 408 + 0.659314
NA Saro_2654 type II secretion system protein Cchromosome CDS2891742 840 - 0.685714
NA Saro_2865 glutathione S-transferase-likechromosome CDS3087750 777 - 0.628057
NA Saro_0362 conjugal transfer protein precursorchromosome CDS398177 579 - 0.683938
NA Saro_1081 peptidase A24A, prepilin type IVchromosome CDS1125506 501 - 0.646707
NA Saro_0915 protoheme IX farnesyltransferasechromosome CDS969351 915 + 0.662295
NA Saro_2664 glycosyl transferase, family 39chromosome CDS2901927 1320 - 0.655303
NA Saro_0229 DSBA oxidoreductasechromosome CDS236715 798 - 0.700501
NA Saro_2791 cytochrome c biogenesis protein, transmembrane regionchromosome CDS3012112 2061 + 0.700631
NA Saro_3155 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS3368433 474 + 0.620253
NA Saro_0377 putative methylase/helicasechromosome CDS410029 4380 - 0.675571
NA Saro_1956 DNA repair protein RadAchromosome CDS2074050 1368 - 0.650585
NA Saro_1769 Glutathione peroxidasechromosome CDS1863782 489 + 0.609407
NA Saro_1391 periplasmic protein thiolchromosome CDS1435401 552 + 0.666667
NA Saro_2834 peptidylprolyl isomerase, FKBP-typechromosome CDS3061771 564 - 0.659574
NA Saro_3219 peptidase M48, Ste24pchromosome CDS3436809 936 - 0.676282
NA Saro_0826 Leucyltransferasechromosome CDS879049 792 - 0.669192
NA Saro_2889 glutathione S-transferase-likechromosome CDS3109498 630 - 0.653968
NA Saro_0276 Mg chelatase-related proteinchromosome CDS293861 1509 - 0.71173
NA Saro_0564 glutathione S-transferase-likechromosome CDS612277 684 - 0.684211
NA Saro_2160 hypothetical proteinchromosome CDS2298519 915 + 0.661202
NA Saro_0187 protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS191067 594 - 0.693603
NA Saro_2519 Glutaredoxin-related proteinchromosome CDS2722991 330 - 0.581818
NA Saro_2054 Chaperone DnaKchromosome CDS2195435 1908 - 0.637841
NA Saro_0266 thioredoxinchromosome CDS284887 906 + 0.682119
NA Saro_0035 chaperonin GroELchromosome CDS35710 1644 + 0.648418
NA Saro_0504 Excaliburchromosome CDS547191 417 + 0.582734
NA Saro_3197 band 7 proteinchromosome CDS3414207 909 - 0.640264
NA Saro_3055 ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS3271222 708 - 0.648305
NA Saro_1390 cytochrome c assembly proteinchromosome CDS1433437 1968 + 0.661077
NA Saro_1994 glutathione S-transferase-likechromosome CDS2124484 606 + 0.636964
NA Saro_1101 Arginyltransferasechromosome CDS1143360 855 + 0.636257
NA Saro_3012 zinc finger, C4-typechromosome CDS3228726 204 - 0.519608
NA Saro_3333 HflK proteinchromosome CDS3553667 1125 - 0.667556
NA Saro_0958 protein-disulfide isomerasechromosome CDS1005560 717 - 0.656904
NA Saro_2405 glutathione S-transferase-likechromosome CDS2573603 840 + 0.645238
NA Saro_1701 protein of unknown function DUF182chromosome CDS1785688 978 - 0.669734
NA Saro_1392 cytochrome C biogenesis proteinchromosome CDS1435949 441 + 0.673469
NA Saro_0956 protein-disulfide isomerasechromosome CDS1003928 750 - 0.650667
NA Saro_2634 heat shock protein HslVU, ATPase subunit HslUchromosome CDS2870737 1302 - 0.648233
NA Saro_0221 Protein-methionine-S-oxide reductasechromosome CDS230975 492 + 0.693089
NA Saro_1361 ATP-dependent protease Lachromosome CDS1408377 2412 + 0.639304
NA Saro_0066 ATP dependent Clp proteasechromosome CDS66339 2379 + 0.652375
NA Saro_1329 hypothetical proteinchromosome CDS1371876 705 + 0.64539
NA Saro_3154 Glutamate-ammonia-ligase adenylyltransferasechromosome CDS3365728 2709 + 0.690661
NA Saro_3060 signal peptide peptidase SppA, 67K typechromosome CDS3277719 1878 - 0.671991
NA Saro_0076 ATP-dependent metalloprotease FtsHchromosome CDS77647 1935 - 0.654264
NA Saro_1593 peptidase S8 and S53, subtilisin, kexin, sedolisinchromosome CDS1653118 1191 + 0.685139
NA Saro_2020 hypothetical proteinchromosome CDS2152601 1941 + 0.684183
NA Saro_1393 Tetratricopeptide TPR_4chromosome CDS1436386 699 + 0.688126
NA Saro_2091 glutathione S-transferase-likechromosome CDS2227684 774 - 0.618863
NA Saro_1387 heme exporter protein CcmCchromosome CDS1432097 729 + 0.659808
NA Saro_0837 peptidyl-prolyl cis-trans isomerase, cyclophilin typechromosome CDS885781 699 - 0.679542
NA Saro_3331 Peptidase S1C, Dochromosome CDS3551124 1533 - 0.667971
NA Saro_1448 peptidyl-prolyl cis-trans isomerasechromosome CDS1492815 993 - 0.623364
NA Saro_0402 band 7 proteinchromosome CDS441880 774 + 0.595607
NA Saro_2305 peptidase A24A-likechromosome CDS2445429 789 - 0.669201
NA Saro_3095 peptide methionine sulfoxide reductasechromosome CDS3315106 537 + 0.642458
NA Saro_0580 glutathione S-transferase-likechromosome CDS626906 675 + 0.662222
NA Saro_1613 FAD-dependent pyridine nucleotide-disulphide oxidoreductasechromosome CDS1682054 942 + 0.630573
NA Saro_1996 thioredoxinchromosome CDS2125964 321 - 0.638629
NA Saro_3139 Hsp33 proteinchromosome CDS3349503 915 - 0.645902
NA Saro_3288 cytochrome oxidase assemblychromosome CDS3505741 1053 - 0.675214
NA Saro_0302 TPR repeat proteinchromosome CDS327631 1014 + 0.67357
NA Saro_0005 peptidase M48, Ste24pchromosome CDS3946 1179 + 0.670908
NA Saro_2890 glutathione S-transferase-likechromosome CDS3110200 648 - 0.665123
NA Saro_2343 thioredoxin reductasechromosome CDS2489959 969 - 0.661507
NA Saro_1119 heme exporter protein CcmAchromosome CDS1164585 576 + 0.680556
NA Saro_3080 glutathione S-transferase-likechromosome CDS3298573 672 + 0.645833
NA Saro_1120 cytochrome c-type biogenesis protein CcmBchromosome CDS1165157 663 + 0.711916
NA Saro_3034 hypothetical proteinchromosome CDS3246286 681 + 0.69163
NA Saro_3059 trigger factorchromosome CDS3275439 1542 - 0.647211
NA Saro_1444 SsrA-binding proteinchromosome CDS1488542 483 + 0.581781
NA Saro_0573 AAA family ATPase, CDC48 subfamilychromosome CDS619329 2319 + 0.683484
NA Saro_2591 conserved hypothetical proteinchromosome CDS2797271 2145 - 0.653147
NA Saro_2678 thioredoxin family proteinchromosome CDS2916374 552 + 0.641304
NA Saro_0300 hypothetical proteinchromosome CDS323913 897 - 0.661093
NA Saro_0565 glutathione peroxidasechromosome CDS612965 549 - 0.666667
NA Saro_2578 cytochrome c oxidase, cbb3-type, subunit Ichromosome CDS2781217 1647 - 0.637523
NA Saro_1717 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS1804839 564 + 0.62766
NA Saro_0034 chaperonin Cpn10chromosome CDS35373 288 + 0.635417
NA Saro_1687 conserved hypothetical proteinchromosome CDS1771093 591 + 0.663283
NA Saro_3114 glutathione S-transferase-likechromosome CDS3328116 657 - 0.652968
NA Saro_1019 heat shock protein DnaJ-likechromosome CDS1058602 534 + 0.666667
NA Saro_3026 hypothetical proteinchromosome CDS3235845 1212 + 0.588284
NA Saro_0301 cyclic nucleotide-binding domain (cNMP-BD) proteinchromosome CDS324814 2577 - 0.658518
NA Saro_1389 CcmE/CycJ proteinchromosome CDS1432970 471 + 0.645435
NA Saro_0682 UTP-GlnB (protein PII) uridylyltransferase, GlnDchromosome CDS719453 2739 + 0.656444
NA Saro_1526 peptidase A24A, prepilin type IVchromosome CDS1570451 474 + 0.582278
NA Saro_0158 peptide methionine sulfoxide reductasechromosome CDS155613 678 + 0.648968
NA Saro_1276 glutathione S-transferase-likechromosome CDS1315537 627 + 0.644338
NA Saro_3054 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome CDS3269818 1257 - 0.615752
NA Saro_2123 glutaredoxinchromosome CDS2261861 798 + 0.641604
NA Saro_2013 Glutaredoxin, GrxCchromosome CDS2145858 267 - 0.621723
NA Saro_2565 putative transmembrane proteinchromosome CDS2767633 1179 + 0.692112
NA Saro_0197 FeS assembly ATPase SufCchromosome CDS203940 744 + 0.643817
NA Saro_2772 20S proteasome, A and B subunitschromosome CDS2991231 765 - 0.611765