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2024-05-01 10:53:34

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Synechococcus sp. JA-3-3Ab, JA-3-3Ab

Number of genes found: 127

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Synechococcus sp. JA-3-3Ab, JA-3-3Ab
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CYA_1528 pyridine nucleotide-disulfide oxidoreductasechromosome CDS1539402 993 + 0.556898
NA CYA_0552 putative lipoproteinchromosome CDS566654 369 - 0.604336
NA CYA_0607 putative urease accessory protein UreDchromosome CDS615313 792 + 0.559343
NA CYA_0232 peptidase inhibitor, I4 familychromosome CDS235426 1305 - 0.614559
NA CYA_1457 dolichyl-phosphate-mannose-proteinmannosyltransferasechromosome CDS1461999 1560 + 0.634615
NA CYA_0585 peptidase, T1( proteasome) familychromosome CDS596648 771 - 0.582361
NA CYA_2401 peptidase, S8A (subtilisin) familychromosome CDS2410355 1857 + 0.627894
NA CYA_0254 putative cytochrome c-type biogenesis protein ResBchromosome CDS255874 1437 + 0.627001
NA CYA_1806 DnaJ domain proteinchromosome CDS1807825 954 + 0.471698
NA CYA_1928 peptidase S49 (protease IV) family, nonpeptidase-like proteinchromosome CDS1942255 858 - 0.589744
NA CYA_1296 transporter, stomatin/podocin/band 7/nephrosis.2/SPFH (Stomatin) familychromosome CDS1305857 804 + 0.579602
NA CYA_1009 oxidoreductase, 2OG-Fe(II) oxygenase familychromosome CDS1025994 690 - 0.497101
NA CYA_1526 HflC/HflK family proteinchromosome CDS1538229 969 - 0.578947
NA CYA_2755 peptidase, S1C (protease Do) familychromosome CDS2776450 1233 + 0.626115
NA CYA_2046 conserved hypothetical proteinchromosome CDS2065899 294 - 0.527211
NA CYA_2274 hypothetical proteinchromosome CDS2282600 315 - 0.571429
NA CYA_2809 ATPase, AAA familychromosome CDS2826212 1890 + 0.666667
NA CYA_2305 antioxidant, AhpC/TSA familychromosome CDS2309629 468 - 0.594017
NA CYA_2538 oxidoreductase, 2OG-Fe(II) oxygenase familychromosome CDS2558326 891 - 0.499439
NA CYA_1949 AhpC/TSA family proteinchromosome CDS1962280 582 - 0.621993
NA CYA_0719 thioredoxinchromosome CDS723012 537 - 0.592179
NA CYA_1297 HflC/HflK family proteinchromosome CDS1306701 939 + 0.595314
NA CYA_1929 DnaJ domain proteinchromosome CDS1941566 693 + 0.601732
NA CYA_1134 DnaJ domain proteinchromosome CDS1159046 399 - 0.631579
NA CYA_2229 peptidase, S1C (protease Do) familychromosome CDS2244162 1263 + 0.644497
NA CYA_0313 ATPase, AAA familychromosome CDS321745 1512 + 0.602513
NA CYA_1493 DnaJ domain proteinchromosome CDS1499032 1971 + 0.649924
NA CYA_1488 hypothetical proteinchromosome CDS1495536 618 - 0.624595
NA CYA_2021 Mg chelatase-like proteinchromosome CDS2037846 1551 + 0.663443
NA CYA_1240 cytochrome c assembly proteinchromosome CDS1251335 1035 - 0.615459
NA CYA_1589 peptidyl-prolyl cis-trans isomerase, FKBP-typechromosome CDS1598579 456 - 0.600877
NA CYA_0672 antioxidant, AhpC/Tsa familychromosome CDS680628 438 - 0.557078
NA CYA_0558 glutaredoxin-like proteinchromosome CDS571083 342 + 0.552632
NA CYA_0029 peptidase, M48B familychromosome CDS27153 2382 - 0.61377
NA CYA_0004 metalloprotease, ATP-dependent, FtsH familychromosome CDS3256 1887 - 0.625331
NA CYA_1273 glycoprotease family proteinchromosome CDS1287416 684 - 0.650585
NA CYA_0401 peptidase, M48A familychromosome CDS416555 864 + 0.59375
NA CYA_1030 R3H domain proteinchromosome CDS1047276 1902 + 0.640904
NA CYA_2657 deoxyhypusine synthase family proteinchromosome CDS2673243 996 - 0.61747
NA CYA_0056 glutaredoxin family proteinchromosome CDS57450 276 - 0.663043
NA CYA_1570 ATPase, AAA familychromosome CDS1578942 1542 + 0.629053
NA CYA_0132 DnaJ family proteinchromosome CDS125763 969 + 0.597523
NA CYA_2291 conserved hypothetical proteinchromosome CDS2293751 2106 - 0.625831
NA CYA_0659 putative ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS668111 612 + 0.584967
NA CYA_1888 small heat shock protein (HSP20) family proteinchromosome CDS1896114 474 + 0.582278
NA CYA_0907 antioxidant, AhpC/Tsa familychromosome CDS916527 534 + 0.649813
NA CYA_1062 HupE/UreJ family proteinchromosome CDS1078417 618 + 0.658576
NA CYA_0426 conserved hypothetical proteinchromosome CDS444197 561 - 0.5918
NA CYA_1219 glutathione S-transferasechromosome CDS1231275 603 - 0.597015
NA CYA_2837 hypothetical proteinchromosome CDS2857206 378 + 0.502645
NA CYA_2467 Hsp33 family proteinchromosome CDS2477559 963 - 0.609553
NA CYA_0856 DnaJ domain proteinchromosome CDS864219 603 - 0.495854
NA CYA_2055 DnaJ family proteinchromosome CDS2073485 933 - 0.65702
NA CYA_2849 antioxidant, AhpC/Tsa familychromosome CDS2864615 651 - 0.560676
NA CYA_0537 antioxidant, AhpC/Tsa familychromosome CDS552727 609 - 0.602627
NA CYA_2665 DnaJ domain proteinchromosome CDS2682823 582 - 0.59622
NA CYA_2822 DSBA thioredoxin domain proteinchromosome CDS2840401 795 + 0.598742
NA CYA_0914 NifU domain proteinchromosome CDS923278 243 - 0.584362
NA CYA_0791 hypothetical proteinchromosome CDS800172 1521 + 0.615385
NA CYA_0189 trypsin domain lipoproteinchromosome CDS188402 1257 - 0.621321
NA CYA_1482 peptidylprolyl cis-trans isomerase, cyclophilin-typechromosome CDS1489545 480 + 0.6
NA CYA_1223 putative Bdr proteinchromosome CDS1235330 444 - 0.538288
NA CYA_1381 DnaJ domain proteinchromosome CDS1388536 705 + 0.652482
NA CYA_0114 peptidyl-prolyl cis-trans isomerase, cyclophilin-typechromosome CDS108623 747 - 0.625167
NA CYA_0789 conserved hypothetical proteinchromosome CDS798686 264 + 0.632576
NA CYA_1515 cytochrome oxidase assembly proteinchromosome CDS1524408 936 + 0.626068
NA CYA_2530 conserved hypothetical proteinchromosome CDS2548507 774 + 0.636951
NA CYA_1294 anaerobic ribonucleotide reductase activating proteinchromosome CDS1304681 633 + 0.597156
NA CYA_2197 nodulation efficiency family proteinchromosome CDS2216928 426 - 0.607981
NA CYA_0474 OsmC family proteinchromosome CDS491778 411 - 0.545012
NA CYA_0342 conserved hypothetical proteinchromosome CDS360158 597 + 0.649916
NA CYA_2781 conserved hypothetical proteinchromosome CDS2800623 591 + 0.602369
NA CYA_2617 VKORC1/thioredoxin domain proteinchromosome CDS2633965 858 + 0.611888
NA CYA_0343 DnaK family proteinchromosome CDS360754 1542 + 0.632944
NA CYA_0252 cytochrome c biogenesis membrane proteinchromosome CDS255048 750 + 0.630667
NA CYA_0283 ATPase, AAA familychromosome CDS290261 1398 + 0.546495
NA CYA_0657 putative ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS666852 633 + 0.565561
NA CYA_2673 DnaJ domain proteinchromosome CDS2689279 1026 - 0.649123
NA CYA_0249 conserved hypothetical proteinchromosome CDS252953 873 + 0.640321
NA CYA_1442 small heat shock protein (HSP20) family proteinchromosome CDS1448815 441 - 0.553288
NA CYA_2803 PDZ domain proteinchromosome CDS2820791 741 - 0.593792
NA CYA_2088 peptidyl-prolyl cis-trans isomerase, cyclophilin-typechromosome CDS2105977 1128 - 0.625886
NA CYA_1653 RDD family proteinchromosome CDS1650093 771 - 0.619974
NA CYA_0765 peptidase, U32 familychromosome CDS771959 2508 - 0.628389
aat CYA_0634 leucyl/phenylalanyl-tRNA--protein transferasechromosome CDS645674 579 + 0.590674
apcC CYA_2225 phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, corechromosome CDS2241220 204 - 0.583333
bcp CYA_2145 bacterioferritin comigratory proteinchromosome CDS2157522 465 + 0.617204
clpB CYA_0180 ATP-dependent chaperone protein ClpBchromosome CDS176758 2643 - 0.622777
clpC CYA_0656 Clp protease, ATP-binding subunit ClpCchromosome CDS664229 2475 + 0.62101
clpP CYA_1193 ATP-dependent Clp protease, proteolytic subunit ClpPchromosome CDS1206093 603 + 0.565506
clpX CYA_0802 ATP-dependent Clp protease, ATP-binding subunit ClpXchromosome CDS812563 1347 - 0.582777
cyoE CYA_1517 protoheme IX farnesyltransferasechromosome CDS1525396 996 + 0.604418
cysT CYA_0469 sulfate ABC transporter, permease protein CysTchromosome CDS483071 813 - 0.596556
dnaJ CYA_0788 chaperone protein DnaJchromosome CDS797505 1185 + 0.629536
dnaK-1 CYA_0130 chaperone protein DnaKchromosome CDS123678 1887 + 0.626391
dnaK-2 CYA_0787 chaperone protein DnaKchromosome CDS795580 1809 + 0.60586
gcp CYA_0297 O-sialoglycoprotein endopeptidasechromosome CDS300825 1101 + 0.667575
groL-1 CYA_0332 chaperonin GroELchromosome CDS349032 1629 + 0.594843
groL-2 CYA_1407 chaperonin GroELchromosome CDS1411963 1635 + 0.612232
groS CYA_1406 chaperonin, 10 kDachromosome CDS1411585 312 + 0.586538
grpE CYA_0971 co-chaperone GrpEchromosome CDS982540 714 - 0.568627
grxC CYA_0532 glutaredoxin 3chromosome CDS549522 261 + 0.613027
gspO CYA_1318 prepilin peptidasechromosome CDS1329842 843 + 0.669039
hflB CYA_2751 cell division protein FtsHchromosome CDS2769533 1917 + 0.621283
htpG CYA_1079 chaperone protein HtpGchromosome CDS1097087 1860 + 0.548387
kaiB CYA_1901 circadian clock protein KaiBchromosome CDS1912233 303 - 0.544554
msrA CYA_0467 methionine-S-sulfoxide reductasechromosome CDS481554 675 + 0.61037
msrB CYA_1027 methionine-R-sulfoxide reductasechromosome CDS1044863 411 - 0.574209
nifU CYA_1825 Fe-S cluster assembly protein NifUchromosome CDS1830244 939 - 0.603834
pcm CYA_0908 protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS917990 627 - 0.647528
pflA CYA_0475 pyruvate formate-lyase activating enzymechromosome CDS492370 753 - 0.584329
radA CYA_0335 DNA repair protein RadAchromosome CDS353548 1419 - 0.656801
smpB CYA_1218 SsrA-binding proteinchromosome CDS1230625 465 + 0.623656
sppA-1 CYA_0919 signal peptide peptidase SppA, 36K typechromosome CDS928298 807 + 0.591078
sppA-2 CYA_1463 signal peptide peptidase SppA, 36K typechromosome CDS1468878 1041 - 0.628242
sufB CYA_2190 FeS assembly protein SufBchromosome CDS2209665 1437 + 0.560891
sufC CYA_2193 FeS assembly ATPase SufCchromosome CDS2211842 816 + 0.555147
sufD CYA_2194 FeS assembly protein SufDchromosome CDS2212654 1290 + 0.628682
tig CYA_1238 trigger factorchromosome CDS1249105 1674 - 0.606332
trx-1 CYA_0769 thioredoxinchromosome CDS776958 342 + 0.540936
trx-2 CYA_1725 thioredoxinchromosome CDS1730944 333 + 0.570571
trx-3 CYA_2801 thioredoxinchromosome CDS2818536 393 + 0.582697
trxB CYA_1362 thioredoxin-disulfide reductasechromosome CDS1371802 1431 - 0.612858
ureD CYA_0753 urease accessory protein UreDchromosome CDS758348 804 + 0.652985
ureE CYA_0604 urease accessory protein UreEchromosome CDS613567 450 + 0.568889
ureF CYA_0605 urease accessory protein UreFchromosome CDS614023 654 + 0.585627
ureG CYA_0606 urease accessory protein UreGchromosome CDS614688 609 + 0.591133