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2024-05-19 19:41:56

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Thiomicrospira denitrificans ATCC 33889, ATCC 33889

Number of genes found: 94

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Thiomicrospira denitrificans ATCC 33889, ATCC 33889
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Tmden_1429 Hydrogenase expression/formation protein (HUPF/HYPC)SubName: Full=Hydrogenase expression/formation protein (HUPF/HYPC); chromosome CDS1494304 291 - 0.38488
NA Tmden_0517 PpiC-type peptidyl-prolyl cis-trans isomeraseSubName: Full=PpiC-type peptidyl-prolyl cis-trans isomerase; chromosome CDS517240 834 + 0.326139
NA Tmden_0266 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS280816 378 + 0.283069
NA Tmden_1271 Colicin V production proteinSubName: Full=Colicin V production protein; chromosome CDS1341244 651 + 0.301075
NA Tmden_0456 LeucyltransferaseRecName: Full=Leucyl/phenylalanyl-tRNA--protein transferase; EC=2.3.2.6; AltName: Full=L/F-transferase; AltName: Full=Leucyltransferase; AltName: Full=Phenyalanyltransferase; chromosome CDS458483 687 - 0.340611
NA Tmden_0342 thioredoxin-likeSubName: Full=Thioredoxin-like protein; chromosome CDS340518 321 + 0.330218
NA Tmden_0132 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenSubName: Full=Thiol peroxidase (Atypical 2-Cys peroxiredoxin); EC=1.11.1.5; chromosome CDS137315 504 + 0.380952
NA Tmden_0131 O-sialoglycoprotein endopeptidaseRecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; chromosome CDS136219 978 + 0.387526
NA Tmden_0898 Protein-disulfide reductaseSubName: Full=Protein-disulfide reductase; EC=1.8.1.8; chromosome CDS929082 1770 + 0.371751
NA Tmden_1123 Flageller protein FlgASubName: Full=Flageller protein FlgA; chromosome CDS1176719 870 + 0.295402
NA Tmden_1900 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1983286 393 + 0.338422
NA Tmden_1867 ThioredoxinRecName: Full=Thioredoxin; chromosome CDS1949003 321 + 0.34891
NA Tmden_0166 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS167766 405 - 0.318519
NA Tmden_2098 Peptidase S1C, DoSubName: Full=Peptidase S1C, Do; chromosome CDS2193744 1386 + 0.354257
NA Tmden_1988 hypothetical proteinSubName: Full=Nitrite reductase NirF; chromosome CDS2069691 1137 + 0.323659
NA Tmden_1583 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1658665 381 - 0.317585
NA Tmden_1464 ClpX, ATPase regulatory subunitRecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; chromosome CDS1534946 1245 + 0.342169
NA Tmden_1320 Ste24 endopeptidaseSubName: Full=Mername-AA052 peptidase. Metallo peptidase. MEROPS family M48A; chromosome CDS1389263 1302 - 0.354071
NA Tmden_0844 putative lipoprotein thiredoxinSubName: Full=Putative lipoprotein thiredoxin; chromosome CDS873766 558 - 0.318996
NA Tmden_1833 AAA ATPaseSubName: Full=AAA ATPase; chromosome CDS1915274 1737 - 0.35118
NA Tmden_0514 Heat shock protein Hsp20SubName: Full=Heat shock protein Hsp20; chromosome CDS515763 426 + 0.302817
NA Tmden_0081 Cytochrome c oxidase cbb3-type, subunit ISubName: Full=FixN Cbb3-type cytochrome c oxidase subunit I; chromosome CDS88469 1494 + 0.386881
NA Tmden_0146 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS151299 837 + 0.358423
NA Tmden_1686 Protein of unknown function DUF785SubName: Full=Uncharacterized protein; chromosome CDS1766058 426 + 0.302817
NA Tmden_0504 Peptidylprolyl isomeraseRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS508067 546 - 0.347985
NA Tmden_1778 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenSubName: Full=Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; chromosome CDS1860277 597 + 0.393635
NA Tmden_1631 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1713419 243 - 0.308642
NA Tmden_0330 Nitrogen-fixing NifU-likeSubName: Full=Nitrogen-fixing NifU-like protein; chromosome CDS331292 276 + 0.32971
NA Tmden_1803 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenSubName: Full=Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; chromosome CDS1884530 468 - 0.354701
NA Tmden_1377 Heat shock protein HslUSubName: Full=Heat shock protein HslU; chromosome CDS1446442 1329 + 0.349135
NA Tmden_0867 OsmC-like proteinSubName: Full=OsmC-like protein; chromosome CDS894619 465 + 0.348387
NA Tmden_0513 Heat shock protein Hsp20SubName: Full=Heat shock protein Hsp20; chromosome CDS515309 444 + 0.335586
NA Tmden_1023 Peptidase M41SubName: Full=Peptidase M41; chromosome CDS1077781 1644 + 0.343674
NA Tmden_0842 DNA repair protein RadARecName: Full=DNA repair protein radA; chromosome CDS871434 1347 - 0.360059
NA Tmden_1431 Hydrogenase maturation protein HypFSubName: Full=Hydrogenase maturation protein HypF; chromosome CDS1495676 2229 - 0.358905
NA Tmden_0165 FAD-dependent pyridine nucleotide-disulphide oxidoreductaseSubName: Full=FAD-dependent pyridine nucleotide-disulphide oxidoreductase; chromosome CDS166808 954 + 0.368973
NA Tmden_0673 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS687294 462 + 0.313853
NA Tmden_0802 DnaB-like helicase-likeSubName: Full=DnaB-like protein helicase-like protein; chromosome CDS831907 1674 - 0.335125
NA Tmden_0685 Peptidase S49, SppASubName: Full=Peptidase S49, SppA; chromosome CDS696906 870 - 0.357471
NA Tmden_0916 Cytochrome c assembly proteinSubName: Full=Cytochrome c assembly protein; chromosome CDS950861 3126 + 0.352527
NA Tmden_0015 Protein-L-isoaspartate(D-aspartate)O-methyltrans feraseSubName: Full=Protein-L-isoaspartate(D-aspartate) O-methyltransferase; EC=2.1.1.77; chromosome CDS21575 648 + 0.371914
NA Tmden_0397 Heat shock protein DnaJ-likeSubName: Full=Heat shock protein DnaJ-like protein; chromosome CDS395541 753 - 0.334661
NA Tmden_1864 Peptidase U32SubName: Full=Uncharacterized protein; chromosome CDS1946036 1293 - 0.386698
NA Tmden_1876 Band 7 proteinSubName: Full=SPFH domain, Band 7 family protein; chromosome CDS1955729 1119 - 0.38874
NA Tmden_0501 conserved hypothetical thioredoxinSubName: Full=Thioredoxin; chromosome CDS505253 495 - 0.29697
NA Tmden_0012 Methionine sulfoxide reductase A/BSubName: Full=Methionine sulfoxide reductase A/B; chromosome CDS18752 921 - 0.355049
NA Tmden_1292 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1363055 1464 + 0.30123
NA Tmden_1710 Na-Ca exchanger/integrin-beta4SubName: Full=Na-Ca exchanger/integrin-beta4; chromosome CDS1791989 1200 - 0.375833
NA Tmden_1842 Heat shock protein DnaJ-likeSubName: Full=Heat shock protein DnaJ-like protein; chromosome CDS1925946 801 - 0.340824
NA Tmden_1444 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1512285 393 - 0.330789
NA Tmden_0203 Flagellar protein FliSSubName: Full=Flagellar protein FliS; chromosome CDS208925 399 + 0.353383
NA Tmden_0713 Peptidase S1 and S6, chymotrypsin/HapSubName: Full=Peptidase S1 and S6, chymotrypsin/Hap; chromosome CDS733359 1089 - 0.341598
NA Tmden_0862 DSBA oxidoreductaseSubName: Full=DSBA oxidoreductase; chromosome CDS889210 732 + 0.311475
NA Tmden_2071 Protein of unknown function UPF0075RecName: Full=Anhydro-N-acetylmuramic acid kinase; EC=2.7.1.170; AltName: Full=AnhMurNAc kinase; chromosome CDS2160643 1107 + 0.382114
NA Tmden_1432 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1497901 1671 - 0.342908
NA Tmden_1376 20S proteasome, A and B subunitsRecName: Full=ATP-dependent protease subunit HslV; EC=3.4.25.2; chromosome CDS1445900 546 + 0.377289
NA Tmden_0828 SirA-likeSubName: Full=SirA-like protein; chromosome CDS859433 246 - 0.345528
NA Tmden_0336 PDZ/DHR/GLGFSubName: Full=PDZ/DHR/GLGF; chromosome CDS334613 981 + 0.309888
NA Tmden_1460 Peptidylprolyl isomeraseRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS1532034 501 + 0.39521
NA Tmden_0632 Chaperonin Cpn10RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; chromosome CDS643404 261 - 0.360153
NA Tmden_0996 Peptidase A24A-likeSubName: Full=Peptidase A24A-like protein; chromosome CDS1047766 816 - 0.360294
NA Tmden_1643 GrpE proteinRecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; chromosome CDS1727315 558 + 0.379928
NA Tmden_0496 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS498368 417 + 0.328537
NA Tmden_1428 Hydrogenase formation HypD proteinSubName: Full=Hydrogenase formation HypD protein; chromosome CDS1493160 1143 - 0.404199
NA Tmden_1230 Heat shock protein DnaJ-likeSubName: Full=Heat shock protein DnaJ-like protein; chromosome CDS1297595 273 - 0.29304
NA Tmden_0358 ArginyltransferaseSubName: Full=Arginyltransferase; EC=2.3.2.8; chromosome CDS360339 714 - 0.331933
NA Tmden_2007 Nitrogen-fixing NifU-like-likeRecName: Full=Nitrogen fixation protein NifU; chromosome CDS2088725 975 - 0.371282
NA Tmden_1286 Chaperone DnaJRecName: Full=Chaperone protein DnaJ; chromosome CDS1358273 1122 + 0.368984
NA Tmden_1430 Hydrogenase accessory protein HypBSubName: Full=Hydrogenase accessory protein HypB; chromosome CDS1494594 801 - 0.388265
NA Tmden_0897 Protein of unknown function DUF255SubName: Full=Uncharacterized protein; chromosome CDS926974 1935 - 0.356589
NA Tmden_1914 conserved hypothetical proteinRecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG synthase; EC=4.3.99.3; AltName: Full=Queuosine biosynthesis protein QueE; chromosome CDS1995940 666 - 0.34985
NA Tmden_0441 SmpB proteinRecName: Full=SsrA-binding protein; chromosome CDS442672 453 + 0.353201
NA Tmden_1670 Peptidase M41, FtsHRecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; chromosome CDS1753388 1992 - 0.371988
NA Tmden_1644 Chaperone DnaKRecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; chromosome CDS1728033 1887 + 0.373079
NA Tmden_0631 chaperonin GroELRecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; chromosome CDS641742 1629 - 0.395948
NA Tmden_1482 metal dependent phosphohydrolaseRecName: Full=Bifunctional uridylyltransferase/uridylyl-removing enzyme; Short=UTase/UR; AltName: Full=Bifunctional [protein-PII] modification enzyme; AltName: Full=Bifunctional nitrogen sensor protein; chromosome CDS1553745 2514 + 0.316627
NA Tmden_1963 DSBA oxidoreductaseSubName: Full=DSBA oxidoreductase; chromosome CDS2045687 624 - 0.334936
NA Tmden_1849 Radical SAMSubName: Full=Radical SAM; chromosome CDS1931552 990 - 0.384848
NA Tmden_1395 Peptidylprolyl isomerase, FKBP-typeRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS1464080 513 - 0.37232
NA Tmden_0414 Peptidase S16, ATP-dependent protease LaRecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; chromosome CDS411128 2412 + 0.361526
NA Tmden_2036 Endopeptidase ClpRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS2122280 591 - 0.384095
NA Tmden_1426 Hydrogenase expression/formation protein HypESubName: Full=Hydrogenase expression/formation protein HypE; chromosome CDS1490586 999 - 0.44044
NA Tmden_2033 Mg chelatase-related proteinSubName: Full=Mg chelatase-related protein; chromosome CDS2119072 1512 - 0.364418
NA Tmden_1240 putative radical-activating enzymeSubName: Full=Putative radical-activating enzyme; chromosome CDS1307443 582 + 0.300687
NA Tmden_0630 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenSubName: Full=Thiol peroxidase (Atypical 2-Cys peroxiredoxin); EC=1.11.1.5; chromosome CDS641182 510 + 0.382353
NA Tmden_2099 ThioredoxinRecName: Full=Thioredoxin; chromosome CDS2195149 423 + 0.352246
NA Tmden_0520 AAA ATPaseSubName: Full=AAA ATPase; chromosome CDS519743 2577 + 0.362437
NA Tmden_1045 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1106526 2766 - 0.298626
NA Tmden_1869 Thioredoxin reductaseRecName: Full=Thioredoxin reductase; EC=1.8.1.9; chromosome CDS1949834 945 + 0.391534
NA Tmden_1264 Heat shock protein Hsp90RecName: Full=Chaperone protein HtpG; AltName: Full=Heat shock protein HtpG; AltName: Full=High temperature protein G; chromosome CDS1331939 1893 - 0.325938
NA Tmden_0215 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS219227 735 + 0.307483
NA Tmden_0554 Heat shock protein DnaJ-likeSubName: Full=Heat shock protein DnaJ-like protein; chromosome CDS560033 873 + 0.379152
NA Tmden_2037 Trigger factorRecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; chromosome CDS2122875 1302 - 0.336406
NA Tmden_0457 AAA ATPaseSubName: Full=AAA ATPase; chromosome CDS459166 2178 - 0.346189