Gene list
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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Carboxydothermus hydrogenoformans Z-2901, Z-2901
Number of genes found: 100
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| Carboxydothermus hydrogenoformans Z-2901, Z-2901 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | CHY_0723 | glycoprotease, homolog | SubName: Full=Glycoprotease, homolog; | chromosome | CDS | 636925 | 648 | + | 0.401235 |
| NA | CHY_1183 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1053236 | 117 | + | 0.538462 |
| NA | CHY_0567 | glutaredoxin | SubName: Full=Glutaredoxin; | chromosome | CDS | 487863 | 240 | - | 0.379167 |
| NA | CHY_0057 | putative serine protease Do | SubName: Full=Putative serine protease Do; | chromosome | CDS | 46164 | 1113 | + | 0.445642 |
| NA | CHY_1690 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 1511097 | 300 | - | 0.403333 |
| NA | CHY_0899 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 794112 | 627 | + | 0.301435 |
| NA | CHY_0625 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 539374 | 225 | + | 0.36 |
| NA | CHY_0094 | SPFH domain/Band 7 family protein | SubName: Full=SPFH domain/Band 7 family protein; | chromosome | CDS | 80332 | 909 | - | 0.445545 |
| NA | CHY_2491 | protease domain protein | SubName: Full=Protease domain protein; | chromosome | CDS | 2233856 | 1416 | - | 0.396893 |
| NA | CHY_1382 | putative heme exporter protein CcmC | SubName: Full=Putative heme exporter protein CcmC; | chromosome | CDS | 1236521 | 666 | - | 0.402402 |
| NA | CHY_1664 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 1493806 | 324 | - | 0.382716 |
| NA | CHY_1361 | cytochrome C domain protein | SubName: Full=Cytochrome C domain protein; | chromosome | CDS | 1219181 | 483 | - | 0.337474 |
| NA | CHY_1935 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1733427 | 432 | - | 0.384259 |
| NA | CHY_1387 | putative cytochrome c-type biogenesis protein CcmF | SubName: Full=Putative cytochrome c-type biogenesis protein CcmF; | chromosome | CDS | 1239948 | 1998 | - | 0.39039 |
| NA | CHY_1470 | heat shock protein HSP33 | RecName: Full=33 kDa chaperonin; AltName: Full=Heat shock protein 33 homolog; Short=HSP33; | chromosome | CDS | 1311899 | 861 | - | 0.391405 |
| NA | CHY_0821 | hsp20/alpha crystallin family protein | SubName: Full=Hsp20/alpha crystallin family protein; | chromosome | CDS | 726453 | 417 | + | 0.388489 |
| NA | CHY_0560 | thioredoxin/thioredoxin-disulfide reductase | RecName: Full=Thioredoxin reductase; EC=1.8.1.9; | chromosome | CDS | 484181 | 1281 | + | 0.471507 |
| NA | CHY_0171 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 144857 | 1221 | + | 0.433251 |
| NA | CHY_0563 | putative cytochrome c biogenesis protein | SubName: Full=Putative cytochrome c biogenesis protein; | chromosome | CDS | 485909 | 462 | + | 0.419913 |
| NA | CHY_0047 | serine protease, subtilase family | SubName: Full=Serine protease, subtilase family; | chromosome | CDS | 37724 | 1515 | - | 0.458086 |
| NA | CHY_0781 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 688545 | 630 | - | 0.369841 |
| NA | CHY_2454 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2199122 | 666 | - | 0.405405 |
| NA | CHY_2000 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1788075 | 492 | - | 0.406504 |
| NA | CHY_0030 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 23650 | 234 | + | 0.482906 |
| NA | CHY_2651 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2348822 | 2031 | - | 0.409158 |
| NA | CHY_2267 | radical SAM domain protein | SubName: Full=Radical SAM domain protein; | chromosome | CDS | 2047763 | 993 | - | 0.406848 |
| NA | CHY_1383 | putative heme exporter protein CcmB | SubName: Full=Putative heme exporter protein CcmB; | chromosome | CDS | 1237226 | 678 | - | 0.327434 |
| NA | CHY_0997 | flagellar protein | SubName: Full=Flagellar protein; | chromosome | CDS | 881600 | 420 | + | 0.409524 |
| NA | CHY_0857 | SPFH domain / Band 7 family protein | SubName: Full=SPFH domain / Band 7 family protein; | chromosome | CDS | 760717 | 780 | + | 0.478205 |
| NA | CHY_0234 | cyctochrome c, NapC/NirT family | SubName: Full=Cyctochrome c, NapC/NirT family; | chromosome | CDS | 201552 | 1380 | + | 0.478986 |
| NA | CHY_0646 | putative cytochrome c | SubName: Full=Putative cytochrome c; | chromosome | CDS | 559113 | 2010 | + | 0.518408 |
| NA | CHY_1096 | redox-active disulfide protein 2 | SubName: Full=Redox-active disulfide protein 2; | chromosome | CDS | 970755 | 246 | - | 0.398374 |
| NA | CHY_0954 | radical SAM domain protein | RecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG synthase; EC=4.3.99.3; AltName: Full=Queuosine biosynthesis protein QueE; | chromosome | CDS | 841977 | 717 | + | 0.37378 |
| NA | CHY_1095 | thioredoxin domain selenoprotein/cytochrome C biogenesis family protein | SubName: Full=Thioredoxin domain selenoprotein/cytochrome C biogenesis family protein; | chromosome | CDS | 969504 | 1188 | + | 0.429293 |
| NA | CHY_0877 | putative pyruvate formate-lyase activating enzyme | SubName: Full=Putative pyruvate formate-lyase activating enzyme; | chromosome | CDS | 776753 | 846 | + | 0.427896 |
| NA | CHY_0856 | nodulation efficiency family protein | SubName: Full=Nodulation efficiency family protein; | chromosome | CDS | 759400 | 1293 | + | 0.454756 |
| NA | CHY_0548 | peptidase, U32 family | SubName: Full=Peptidase, U32 family; | chromosome | CDS | 477217 | 1212 | + | 0.44637 |
| NA | CHY_0108 | peptidase, M48 family | RecName: Full=Protease HtpX homolog; EC=3.4.24.-; | chromosome | CDS | 93400 | 846 | + | 0.49409 |
| NA | CHY_0740 | dehydrogenase, selenocysteine-containing | SubName: Full=Dehydrogenase, selenocysteine-containing; | chromosome | CDS | 653593 | 657 | + | 0.438356 |
| NA | CHY_0131 | radical SAM domain protein | SubName: Full=Radical SAM domain protein; | chromosome | CDS | 114056 | 1242 | + | 0.475845 |
| NA | CHY_2021 | ADP-ribosylglycohydrolase family protein | SubName: Full=ADP-ribosylglycohydrolase family protein; | chromosome | CDS | 1805993 | 930 | + | 0.425806 |
| NA | CHY_0807 | chaperonin, 60 kDa | RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; | chromosome | CDS | 714805 | 1623 | + | 0.475046 |
| NA | CHY_2348 | negative regulator of genetic competence clpC/mecB | SubName: Full=Negative regulator of genetic competence clpC/mecB; | chromosome | CDS | 2103669 | 2436 | - | 0.447865 |
| NA | CHY_1388 | putative cytochrome c-type biogenesis protein CcmE | SubName: Full=Putative cytochrome c-type biogenesis protein CcmE; | chromosome | CDS | 1241964 | 414 | - | 0.379227 |
| NA | CHY_0416 | chaperone protein dnaJ | RecName: Full=Chaperone protein DnaJ; | chromosome | CDS | 359732 | 1146 | + | 0.473822 |
| NA | CHY_1993 | glycoprotease family protein | SubName: Full=Glycoprotease family protein; | chromosome | CDS | 1781990 | 960 | - | 0.432292 |
| NA | CHY_1640 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1474542 | 567 | + | 0.301587 |
| NA | CHY_1723 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1536539 | 2061 | - | 0.459 |
| NA | CHY_2220 | putative rubredoxin | SubName: Full=Putative rubredoxin; | chromosome | CDS | 2004704 | 126 | - | 0.388889 |
| NA | CHY_1565 | peptidase, U32 family | SubName: Full=Peptidase, U32 family; | chromosome | CDS | 1405096 | 2490 | - | 0.399197 |
| NA | CHY_2419 | hsp20/alpha crystallin family protein | SubName: Full=Hsp20/alpha crystallin family protein; | chromosome | CDS | 2166842 | 438 | - | 0.47032 |
| NA | CHY_0413 | thermosome, alpha subunit | SubName: Full=Thermosome, alpha subunit; | chromosome | CDS | 355739 | 1566 | + | 0.462963 |
| NA | CHY_2685 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2378796 | 231 | - | 0.350649 |
| NA | CHY_2416 | hsp20/alpha crystallin family protein | SubName: Full=Hsp20/alpha crystallin family protein; | chromosome | CDS | 2164187 | 414 | + | 0.396135 |
| NA | CHY_0040 | putative ATP-dependent protease La | SubName: Full=Putative ATP-dependent protease La; | chromosome | CDS | 30884 | 1899 | + | 0.47446 |
| NA | CHY_2465 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2209526 | 843 | - | 0.481613 |
| NA | CHY_2164 | ATPase, AAA family | SubName: Full=ATPase, AAA family; | chromosome | CDS | 1940458 | 1236 | - | 0.33657 |
| NA | CHY_0144 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 124906 | 237 | + | 0.50211 |
| NA | CHY_2577 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2295739 | 222 | - | 0.441441 |
| NA | CHY_0837 | DNA repair protein RadA domain protein | SubName: Full=DNA repair protein RadA domain protein; | chromosome | CDS | 744758 | 1644 | + | 0.467762 |
| NA | CHY_1244 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1109358 | 372 | + | 0.395161 |
| NA | CHY_0862 | osmC family protein | SubName: Full=OsmC family protein; | chromosome | CDS | 765220 | 432 | + | 0.425926 |
| NA | CHY_2018 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 1802422 | 711 | - | 0.403657 |
| NA | CHY_0998 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 882037 | 2109 | + | 0.454718 |
| NA | CHY_0329 | putative ATP-dependent protease La | SubName: Full=Putative ATP-dependent protease La; | chromosome | CDS | 282751 | 1644 | + | 0.476277 |
| NA | CHY_0201 | putative peptidyl-prolyl cis-trans isomerase, PpiC-type | SubName: Full=Putative peptidyl-prolyl cis-trans isomerase, PpiC-type; | chromosome | CDS | 168482 | 1014 | + | 0.399408 |
| NA | CHY_2390 | putative thioredoxin | RecName: Full=Thioredoxin; | chromosome | CDS | 2139648 | 330 | + | 0.430303 |
| NA | CHY_1924 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 1723542 | 744 | - | 0.474462 |
| NA | CHY_0354 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 304535 | 879 | + | 0.401593 |
| NA | CHY_2017 | xanthine dehydrogenase accessory factor-related protein | SubName: Full=Xanthine dehydrogenase accessory factor-related protein; | chromosome | CDS | 1802094 | 393 | - | 0.43257 |
| NA | CHY_0509 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 440696 | 396 | + | 0.409091 |
| clpP | CHY_0325 | ATP-dependent Clp protease, proteolytic subunit ClpP | RecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; | chromosome | CDS | 280446 | 588 | + | 0.445578 |
| clpX | CHY_0326 | ATP-dependent Clp protease, ATP-binding subunit ClpX | RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; | chromosome | CDS | 281050 | 1257 | + | 0.424821 |
| cydC | CHY_2442 | transport ATP-binding protein CydC | SubName: Full=Transport ATP-binding protein CydC; | chromosome | CDS | 2185830 | 1674 | - | 0.428315 |
| dnaK | CHY_0415 | chaperone protein dnaK | RecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; | chromosome | CDS | 357892 | 1815 | + | 0.473829 |
| fliS | CHY_0986 | flagellar protein FliS | SubName: Full=Flagellar protein FliS; | chromosome | CDS | 874400 | 378 | + | 0.365079 |
| ftsH | CHY_0214 | cell division protein FtsH | RecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; | chromosome | CDS | 180029 | 1860 | + | 0.474731 |
| gcp | CHY_0725 | O-sialoglycoprotein endopeptidase | RecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; | chromosome | CDS | 638031 | 1002 | + | 0.457086 |
| gerKA | CHY_0336 | spore germination protein GerKA | SubName: Full=Spore germination protein GerKA; | chromosome | CDS | 292211 | 1599 | + | 0.463415 |
| groES | CHY_0806 | chaperonin, 10 kDa | RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; | chromosome | CDS | 714494 | 285 | + | 0.473684 |
| grpE | CHY_0414 | grpE protein | RecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; | chromosome | CDS | 357288 | 585 | + | 0.384615 |
| hslU | CHY_1790 | heat shock protein HslVU, ATPase subunit HslU | RecName: Full=ATP-dependent protease ATPase subunit HslU; AltName: Full=Unfoldase HslU; | chromosome | CDS | 1601123 | 1386 | - | 0.429293 |
| hslV | CHY_1791 | ATP-dependent protease HslV | RecName: Full=ATP-dependent protease subunit HslV; EC=3.4.25.2; | chromosome | CDS | 1602510 | 540 | - | 0.462963 |
| htrA | CHY_0655 | serine protease Do | SubName: Full=Serine protease Do; EC=3.4.21.-; | chromosome | CDS | 567075 | 1131 | + | 0.493369 |
| hypB | CHY_1541 | hydrogenase accessory protein HypB | SubName: Full=Hydrogenase accessory protein HypB; | chromosome | CDS | 1378302 | 663 | - | 0.375566 |
| hypC | CHY_1539 | hydrogenase assembly chaperone hypC | SubName: Full=Hydrogenase assembly chaperone hypC; | chromosome | CDS | 1375815 | 216 | - | 0.425926 |
| hypD | CHY_1538 | hydrogenase expression/formation protein HypD | SubName: Full=Hydrogenase expression/formation protein HypD; | chromosome | CDS | 1374748 | 1077 | - | 0.41597 |
| hypE | CHY_1537 | hydrogenase expression/formation protein HypE | SubName: Full=Hydrogenase expression/formation protein HypE; | chromosome | CDS | 1373739 | 999 | - | 0.423423 |
| hypF | CHY_1540 | hydrogenase maturation protein HypF | SubName: Full=Hydrogenase maturation protein HypF; | chromosome | CDS | 1376037 | 2265 | - | 0.388521 |
| lon | CHY_0330 | ATP-dependent protease La | RecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; | chromosome | CDS | 284456 | 2385 | + | 0.465409 |
| nrdG | CHY_2050 | anaerobic ribonucleoside-triphosphate reductase activating protein | RecName: Full=Anaerobic ribonucleoside-triphosphate reductase-activating protein; EC=1.97.1.-; | chromosome | CDS | 1836310 | 510 | - | 0.4 |
| pilD | CHY_0634 | type IV prepilin peptidase | RecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; | chromosome | CDS | 549064 | 750 | + | 0.392 |
| radA | CHY_2347 | DNA repair protein RadA | RecName: Full=DNA repair protein radA; | chromosome | CDS | 2102231 | 1335 | - | 0.447191 |
| smpB | CHY_0290 | SsrA-binding protein | RecName: Full=SsrA-binding protein; | chromosome | CDS | 257939 | 450 | + | 0.402222 |
| spoVK | CHY_1391 | stage V sporulation protein K | SubName: Full=Stage V sporulation protein K; | chromosome | CDS | 1244646 | 891 | - | 0.363636 |
| tig | CHY_0324 | trigger factor | RecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; | chromosome | CDS | 279138 | 1284 | + | 0.409657 |
| trx1 | CHY_0553 | thioredoxin | RecName: Full=Thioredoxin; | chromosome | CDS | 480592 | 324 | + | 0.410494 |
| trx2 | CHY_2202 | thioredoxin | RecName: Full=Thioredoxin; | chromosome | CDS | 1983178 | 321 | - | 0.364486 |
| trxB1 | CHY_0906 | thioredoxin-disulfide reductase | RecName: Full=Thioredoxin reductase; EC=1.8.1.9; | chromosome | CDS | 800730 | 918 | + | 0.48366 |
| trxB2 | CHY_2389 | thioredoxin-disulfide reductase | RecName: Full=Thioredoxin reductase; EC=1.8.1.9; | chromosome | CDS | 2138710 | 924 | + | 0.497835 |
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