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2024-05-06 18:47:44

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Rhizobium etli CFN 42, CFN 42

Number of genes found: 153

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhizobium etli CFN 42, CFN 42
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RHE_CH01273 probable serine protease proteinchromosome CDS1322081 906 - 0.635762
NA RHE_CH00323 probable Mg-chelatase proteinchromosome CDS328710 1533 + 0.688193
NA RHE_CH01174 probable organic hydroperoxide resistance (osmotically inducible) proteinchromosome CDS1226109 423 + 0.643026
NA RHE_CH01244 probable molecular chaperone small heat shock protein, hsp20 familychromosome CDS1298641 480 + 0.583333
NA RHE_PF00557 hypothetical conserved proteinp42f CDS622982 684 - 0.597953
NA RHE_CH00244 hypothetical conserved proteinchromosome CDS258414 294 - 0.639456
NA RHE_CH03558 hypothetical conserved proteinchromosome CDS3748217 456 + 0.640351
NA RHE_CH02257 hypothetical conserved proteinchromosome CDS2356922 1113 - 0.654088
NA RHE_CH02234 hypothetical conserved proteinchromosome CDS2335786 786 - 0.652672
NA RHE_CH03830 hypothetical conserved proteinchromosome CDS4054211 225 + 0.586667
NA RHE_CH02411 probable stress-induced OsmC-like proteinchromosome CDS2522814 417 - 0.645084
NA RHE_CH02410 probable maleylpyruvate isomerase proteinchromosome CDS2521957 636 - 0.649371
NA RHE_CH00968 probable peroxiredoxin proteinchromosome CDS1015353 486 + 0.648148
NA RHE_PF00522 hypothetical conserved proteinp42f CDS588168 531 + 0.610169
NA RHE_CH02337 hypothetical conserved proteinchromosome CDS2437581 687 + 0.599709
NA RHE_CH00999 putative thiol-disulfide oxidoreductase proteinchromosome CDS1047009 780 + 0.605128
NA RHE_CH01565 probable cytochrome-c oxidase proteinchromosome CDS1646387 1104 + 0.628623
NA RHE_CH01415 putative ABC transporter, ATP-binding proteinchromosome CDS1484819 1878 - 0.617678
NA RHE_CH01008 hypothetical conserved proteinchromosome CDS1058691 681 - 0.654919
NA RHE_CH00967 hypothetical conserved proteinchromosome CDS1014467 804 + 0.651741
NA RHE_CH00380 probable O-sialoglycoprotein endopeptidase proteinchromosome CDS391025 663 - 0.648567
NA RHE_CH02570 probable serine protease protein, HtrA/DegQ familychromosome CDS2680040 957 - 0.641588
NA RHE_PF00064 hypothetical conserved proteinp42f CDS63900 240 + 0.525
NA RHE_CH01303 probable molecular chaperone heat shock protein, Hsp70 familychromosome CDS1355940 1293 - 0.617943
NA RHE_CH02415 putative cytochrome biogenesis proteinchromosome CDS2526832 1938 + 0.619711
NA RHE_CH01245 probable molecular chaperone small heat shock protein, hsp20 familychromosome CDS1299200 510 + 0.586275
NA RHE_CH00620 putative membrane-anchored protein (osmotically inducible protein)chromosome CDS639104 435 + 0.62069
NA RHE_CH02096 putative redox proteinchromosome CDS2195456 468 + 0.615385
NA RHE_CH01582 hypothetical conserved proteinchromosome CDS1662765 312 + 0.621795
NA RHE_CH03345 hypothetical conserved membrane proteinchromosome CDS3509446 1320 + 0.594697
NA RHE_CH01451 probable peptidyl-prolyl cis-trans isomerase proteinchromosome CDS1521112 945 - 0.612698
NA RHE_CH04014 glutathione S-transferase proteinchromosome CDS4250937 648 + 0.611111
NA RHE_CH01971 hypothetical proteinchromosome CDS2055367 453 + 0.556291
NA RHE_CH01997 hypothetical conserved proteinchromosome CDS2087205 1689 - 0.561279
NA RHE_CH01094 hypothetical conserved proteinchromosome CDS1142594 2106 + 0.655746
NA RHE_CH01216 probable glutathione S-transferase proteinchromosome CDS1268239 630 - 0.580952
NA RHE_CH03557 putative membrane protease subunit proteinchromosome CDS3747182 1032 + 0.629845
NA RHE_CH01872 probable outer membrane proteinchromosome CDS1954708 615 - 0.609756
NA RHE_CH02137 hypothetical conserved proteinchromosome CDS2237514 681 - 0.603524
NA RHE_CH03061 putative glutathione S-transferase proteinchromosome CDS3202318 987 + 0.593718
NA RHE_CH03783 hypothetical conserved proteinchromosome CDS4010649 516 + 0.616279
NA RHE_CH01791 probable anti-oxidant protein, AhpCTSA familychromosome CDS1880642 660 + 0.590909
NA RHE_CH02927 probable Clp protease proteinchromosome CDS3058900 2085 - 0.606715
NA RHE_CH00668 putative glycosyltransferase TPR domain proteinchromosome CDS685189 1635 - 0.609786
NA RHE_CH03920 putative stress-induced OsmC-like proteinchromosome CDS4151019 408 - 0.64951
NA RHE_CH01196 probable glutathione S-transferase proteinchromosome CDS1250652 672 - 0.635417
NA RHE_PF00472 probable small heat shock proteinp42f CDS532575 672 - 0.559524
NA RHE_CH02703 putative isoprenylcysteine carboxyl methyltransferase proteinchromosome CDS2816298 702 - 0.623932
NA RHE_CH01127 hypothetical conserved proteinchromosome CDS1179555 642 - 0.573209
aat RHE_CH01868 leucyltransferase proteinchromosome CDS1951631 615 - 0.586992
ate RHE_CH01502 arginyl-tRNA protein transferase proteinchromosome CDS1579840 825 - 0.597576
bcp RHE_CH02262 bacterioferritin comigratory proteinchromosome CDS2365159 474 + 0.603376
btuE RHE_CH01597 glutathione peroxidase proteinchromosome CDS1681033 549 + 0.601093
ccmA RHE_CH03945 heme ABC transporter, ATP-binding protein (involved in cytochrome-c biogenesis)chromosome CDS4175214 603 + 0.593698
ccmB RHE_CH03947 heme ABC transporter, permease protein (involved in cytochrome-c biogenesis)chromosome CDS4176052 660 + 0.672727
ccmC RHE_CH03948 heme ABC transporter, permease protein (involved in cytochrome-c biogenesis)chromosome CDS4176759 762 + 0.643045
ccmE RHE_PF00497 cytochrome c-type biogenesis proteinp42f CDS561827 468 - 0.630342
ccmF RHE_PF00496 cytochrome c-type biogenesis proteinp42f CDS560469 1362 - 0.639501
ccmI RHE_PF00498 cytochrome c-type biogenesis proteinp42f CDS562291 870 - 0.629885
ccsA RHE_CH01964 cytochrome-c-type biogenesis proteinchromosome CDS2048618 750 - 0.64
clpA RHE_CH01907 ATP-dependent Clp protease, ATP-binding subunit proteinchromosome CDS1987928 2490 + 0.612048
clpB RHE_CH03753 ATP-dependent Clp protease, ATP-binding subunit proteinchromosome CDS3977528 2601 - 0.619377
clpP1 RHE_CH01414 endopeptidase Clp, subunit 1 proteinchromosome CDS1483984 609 + 0.579639
clpP2 RHE_CH01587 endopeptidase Clp, subunit 2 proteinchromosome CDS1669050 630 + 0.606349
clpP3 RHE_CH03069 endopeptidase Clp, subunit 3 proteinchromosome CDS3210802 585 - 0.593162
clpX RHE_CH01588 ATP-dependent Clp protease, ATP-binding subunit proteinchromosome CDS1669980 1278 + 0.607981
cpaA RHE_CH00203 prepilin peptidase proteinchromosome CDS215529 513 + 0.575049
ctaB RHE_CH00954 protoheme IX farnesyltransferase proteinchromosome CDS1003334 951 + 0.630915
ctaG RHE_CH00955 cytochrome-c oxidase assembly proteinchromosome CDS1004421 609 + 0.581281
cycH RHE_CH01289 cytochrome-c-type biogenesis proteinchromosome CDS1335397 1131 + 0.654288
cycJ RHE_CH01290 cytochrome-c biosynthesis heme-carrier proteinchromosome CDS1336524 468 + 0.630342
cycK RHE_CH01291 cytochrome-c-type synthesis proteinchromosome CDS1336988 1995 + 0.664662
cycL RHE_CH01292 cytochrome-c-type biogenesis proteinchromosome CDS1338979 456 + 0.635965
cycY RHE_CH03950 thiol disulfide interchange protein (involved in cytochrome-c biogenesis)chromosome CDS4177688 609 + 0.619048
degPch1 RHE_CH01120 serine protease DO-like proteinchromosome CDS1169820 1503 - 0.664671
degPch2 RHE_CH01293 serine protease DO-like proteinchromosome CDS1339582 1590 + 0.642767
degPch3 RHE_CH01707 serine protease DO-like proteinchromosome CDS1788325 1293 + 0.623357
degPch4 RHE_CH02795 serine protease DO-like proteinchromosome CDS2908888 1710 - 0.627485
djlA RHE_CH02861 molecular chaperone protein, DnaJ familychromosome CDS2989129 708 - 0.584746
dnaJ1 RHE_CH00144 molecular chaperone protein, DnaJ familychromosome CDS151875 1128 - 0.614362
dnaJ2 RHE_CH00939 molecular chaperone protein, DnaJ familychromosome CDS989104 1185 - 0.646414
dnaJ3 RHE_CH03822 molecular chaperone protein, DnaJ familychromosome CDS4046403 810 - 0.579012
dnaK RHE_CH00145 chaperone protein (Heat shock protein 70)chromosome CDS153088 1917 - 0.612937
exsD RHE_CH03713 organic-radical-activating proteinchromosome CDS3934105 729 + 0.60631
fixNf RHE_PF00507 cytochrome C oxidase, fixN chain proteinp42f CDS570563 1353 - 0.602365
flgA RHE_CH00662 flagellar basal-body rod proteinchromosome CDS681016 483 + 0.621118
ftsH RHE_CH03458 cell division metalloproteinase proteinchromosome CDS3642867 1932 - 0.613872
gcp RHE_CH03903 o-sialoglycoprotein endopeptidase proteinchromosome CDS4134640 1086 - 0.663904
glnD RHE_CH00387 [protein-PII] uridylyltransferase proteinchromosome CDS396986 2835 - 0.628571
glnE RHE_CH01296 glutamate-ammonia-ligase adenylyltransferase proteinchromosome CDS1343536 2958 + 0.640297
grlA RHE_CH02304 glutaredoxin proteinchromosome CDS2401610 336 + 0.574405
groELch1 RHE_CH00828 60 kDa chaperonin, heat shock proteinchromosome CDS866761 1638 - 0.615995
groELch2 RHE_CH01239 60 kDa chaperonin, heat shock proteinchromosome CDS1292616 1629 + 0.61019
groELch3 RHE_CH01271 60 kDa chaperonin, heat shock proteinchromosome CDS1319785 1635 + 0.626911
groELf RHE_PF00330 60 kDa chaperonin, heat shock proteinp42f CDS369683 1629 + 0.607121
groESch1 RHE_CH00829 10 kDa chaperonin, heat shock proteinchromosome CDS868469 297 - 0.602694
groESch2 RHE_CH01238 10 kDa chaperonin, heat shock proteinchromosome CDS1292250 315 + 0.606349
groESch3 RHE_CH01270 10 kDa chaperonin, heat shock proteinchromosome CDS1319420 318 + 0.591195
groESf RHE_PF00329 10 kDa chaperonin, heat shock proteinp42f CDS369218 315 + 0.6
grpE RHE_CH00365 molecular chaperone heat shock protein (hsp-70)chromosome CDS377676 636 + 0.638365
grxC RHE_CH03762 glutaredoxin proteinchromosome CDS3989442 318 - 0.584906
gstA RHE_CH01278 glutathione S-transferase proteinchromosome CDS1326451 612 + 0.632353
gstch1 RHE_CH00281 glutathione S-transferase proteinchromosome CDS292402 684 - 0.614035
gstch2 RHE_CH00309 glutathione S-transferase proteinchromosome CDS317460 693 - 0.619048
gstch3 RHE_CH00825 glutathione S-transferase proteinchromosome CDS864620 711 + 0.586498
gstch4 RHE_CH01001 glutathione S-transferase proteinchromosome CDS1051359 654 - 0.657492
gstch5 RHE_CH01074 glutathione S-transferase proteinchromosome CDS1128284 606 - 0.587459
gstch6 RHE_CH01147 glutathione S-transferase proteinchromosome CDS1199843 621 + 0.63124
gstch7 RHE_CH01482 glutathione S-transferase proteinchromosome CDS1553346 597 - 0.58794
gstch8 RHE_CH02320 glutathione S-transferase proteinchromosome CDS2417955 627 + 0.631579
gstch9 RHE_CH02424 glutathione S-transferase proteinchromosome CDS2537048 687 + 0.615721
hflC RHE_CH02796 hydrolase serine protease transmembrane subunit C proteinchromosome CDS2910797 960 - 0.640625
hflK RHE_CH02797 hydrolase serine protease transmembrane subunit K proteinchromosome CDS2911762 1089 - 0.615243
hslU RHE_CH00049 heat shock protease HslVU, subunit HslU chaperone protein (ATP-dependent protease ATP-binding subunit hslU)chromosome CDS48952 1308 + 0.606269
hslV RHE_CH00048 heat shock protease HslVU, subunit HslV proteinchromosome CDS48319 528 + 0.598485
hsp RHE_CH00367 molecular chaperone small heat shock proteinchromosome CDS379578 426 + 0.624413
hsp33 RHE_CH00518 33K chaperonin (heat shock protein 33) proteinchromosome CDS536936 993 + 0.666667
htpG RHE_PF00122 heat shock chaperone protein, Hsp90 familyp42f CDS129436 1893 + 0.582673
htpX1 RHE_CH01974 protease protein, heat-shock-likechromosome CDS2058010 897 - 0.620959
htpX2 RHE_CH04110 protease protein, heat-shock-likechromosome CDS4361253 957 - 0.611285
ibpA RHE_CH03571 molecular chaperone small heat shock proteinchromosome CDS3765969 471 - 0.600849
ligE RHE_CH01471 beta-aryl ether cleaving enzyme, lignin degradation proteinchromosome CDS1544614 525 + 0.628571
lon RHE_CH01589 ATP-dependent protease LA proteinchromosome CDS1671670 2418 + 0.604632
maiA RHE_CH01748 maleylacetoacetate isomerase proteinchromosome CDS1831170 633 + 0.593997
msrB RHE_CH01247 peptide methionine sulfoxide reductase proteinchromosome CDS1300580 414 - 0.637681
nifUch1 RHE_CH00381 nitrogen fixation proteinchromosome CDS391775 567 - 0.592593
nrdH RHE_CH03718 glutaredoxin proteinchromosome CDS3939916 222 - 0.617117
ohr RHE_CH02544 organic hydroperoxide resistance proteinchromosome CDS2653757 396 - 0.621212
osmC RHE_CH03690 osmotically inducible proteinchromosome CDS3909631 432 - 0.613426
pcm1 RHE_CH01809 protein-L-isoaspartate O-methyltransferase proteinchromosome CDS1892794 666 + 0.618619
pcm2 RHE_CH01828 protein-L-isoaspartate O-methyltransferase proteinchromosome CDS1915389 654 + 0.607034
ppiA RHE_CH02114 peptidyl prolyl cis-trans isomerase A signal peptide proteinchromosome CDS2214714 573 + 0.582897
ppiB RHE_CH02115 peptidyl prolyl cis-trans isomerase B signal peptide proteinchromosome CDS2215315 510 + 0.6
ppiD1 RHE_CH02173 peptidyl prolyl cis-trans isomerase D signal peptide proteinchromosome CDS2276398 1941 + 0.625451
ppiD2 RHE_CH03769 peptidyl prolyl cis-trans isomerase D signal peptide proteinchromosome CDS3994826 882 - 0.596372
radA RHE_CH01430 DNA repair proteinchromosome CDS1501377 1401 - 0.669522
smpB RHE_CH01382 ssrA-binding (tmRNA-binding) proteinchromosome CDS1457371 480 + 0.5875
sohB RHE_CH00879 protease proteinchromosome CDS919771 861 + 0.629501
sppA RHE_CH00400 proteinase IV proteinchromosome CDS414054 951 - 0.607781
sufB RHE_CH02253 ABC transporter involved in Fe-S cluster assembly, permease proteinchromosome CDS2352633 1470 - 0.593878
sufC RHE_CH02251 ABC transporter involved in Fe-S cluster assembly, ATP-binding proteinchromosome CDS2351373 756 - 0.60582
sufD RHE_CH02250 ABC transporter involved in Fe-S cluster assembly, permease proteinchromosome CDS2350074 1275 - 0.643137
tig RHE_CH01842 trigger factor proteinchromosome CDS1928787 1485 + 0.597306
tlpA RHE_CH03795 thiol:disulfide interchange proteinchromosome CDS4020149 663 - 0.61991
trxA1 RHE_CH00025 thioredoxin proteinchromosome CDS21976 321 - 0.566978
trxA2 RHE_CH03979 thioredoxin proteinchromosome CDS4205020 975 - 0.63282
trxBch RHE_CH02975 thioredoxin reductase (NADPH) proteinchromosome CDS3115673 975 + 0.63282
trxBf RHE_PF00137 thioredoxin reductase (NADPH) proteinp42f CDS143910 906 + 0.5883
ureD RHE_CH03311 urease accessory proteinchromosome CDS3473104 672 - 0.654762
ureE RHE_CH03302 urease accessory proteinchromosome CDS3466849 687 - 0.573508
ureF RHE_CH03301 urease accessory proteinchromosome CDS3466172 672 - 0.651786
ureG RHE_CH03300 urease accessory proteinchromosome CDS3465472 612 - 0.632353
xdhC RHE_CH03126 xanthine dehydrogenase proteinchromosome CDS3275961 813 + 0.651906