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2024-05-07 15:07:31

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Thiobacillus denitrificans ATCC 25259, ATCC 25259

Number of genes found: 150

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thiobacillus denitrificans ATCC 25259, ATCC 25259
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Tbd_1677 peptidase S14, ClpPchromosome CDS1765288 639 - 0.605634
NA Tbd_0091 chaperonin GroEL (Hsp60, Cpn10)chromosome CDS96510 1644 - 0.643552
NA Tbd_0676 putative ATP-dependent protease LA, putativechromosome CDS717129 2433 + 0.697493
NA Tbd_1693 conserved hypothetical proteinchromosome CDS1782860 2493 + 0.607702
NA Tbd_1756 tmRNA-binding protein SmpBchromosome CDS1847053 450 + 0.624444
NA Tbd_2695 putative protein-L-isoaspartate o-methyltransferasechromosome CDS2777332 654 + 0.674312
NA Tbd_2006 peroxiredoxin-like proteinchromosome CDS2093763 570 + 0.7
NA Tbd_1078 Chaperone protein htpGchromosome CDS1137684 1902 - 0.629338
NA Tbd_0586 alkyl hydroperoxide reductasechromosome CDS615855 465 + 0.604301
NA Tbd_2136 conserved hypothetical proteinchromosome CDS2222095 432 + 0.68287
NA Tbd_2046 conserved hypothetical proteinchromosome CDS2134898 624 + 0.714744
NA Tbd_0156 conserved hypothetical proteinchromosome CDS168142 561 + 0.636364
NA Tbd_2629 serine protease SohBchromosome CDS2702008 1002 + 0.693613
NA Tbd_0237 Mg chelatase-related proteinchromosome CDS260725 1488 - 0.722446
NA Tbd_2118 thioredoxinchromosome CDS2206467 495 - 0.591919
NA Tbd_1593 flagellar protein FliSchromosome CDS1680415 453 + 0.620309
NA Tbd_1273 ABC-type transport system ATPasechromosome CDS1338522 1869 + 0.661316
NA Tbd_1678 trigger factorchromosome CDS1765926 1299 - 0.639723
NA Tbd_0335 protoheme IX farnesyltransferasechromosome CDS355177 897 + 0.661093
NA Tbd_1675 peptidase S16, ATP-dependent protease Lachromosome CDS1761469 2418 - 0.624069
NA Tbd_1001 thioredoxin reductasechromosome CDS1068125 1038 - 0.643545
NA Tbd_0587 fkbp-type peptidyl-prolyl cis-trans isomerasechromosome CDS616316 483 + 0.648033
NA Tbd_2091 peptidase S1C, Dochromosome CDS2182805 1395 - 0.671685
NA Tbd_0174 thiol peroxidase-scavengase P20 oxidoreductase proteinchromosome CDS187410 492 - 0.642276
NA Tbd_2569 hypothetical proteinchromosome CDS2643207 483 + 0.645963
NA Tbd_1827 hypothetical proteinchromosome CDS1927750 522 - 0.678161
NA Tbd_0999 bacterioferritin comigratory proteinchromosome CDS1066989 456 - 0.60307
NA Tbd_1126 glutaredoxin 3chromosome CDS1180799 279 + 0.645161
NA Tbd_2338 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS2412953 1311 + 0.673532
NA Tbd_2203 radical activating enzyme; radical SAM familychromosome CDS2283769 651 - 0.694316
NA Tbd_2434 hypothetical proteinchromosome CDS2505232 540 + 0.707407
NA Tbd_1965 hypothetical proteinchromosome CDS2057469 183 - 0.639344
NA Tbd_0185 putative transmembrane cytochrome C-type biogenesis transmembrane proteinchromosome CDS196827 1140 - 0.632456
NA Tbd_1830 stringent starvation protein achromosome CDS1929561 600 - 0.606667
NA Tbd_2631 methionine sulfoxide reductase Bchromosome CDS2703907 474 - 0.670886
NA Tbd_2603 heat shock protein HtpXchromosome CDS2678900 876 - 0.640411
NA Tbd_2186 putative proteasechromosome CDS2268158 1002 - 0.655689
NA Tbd_1431 putative heat shock protein, DnaJ familychromosome CDS1519338 957 - 0.680251
NA Tbd_1725 glycoprotease, (M22) metallo-protease familychromosome CDS1810046 690 - 0.723188
NA Tbd_0184 thioredoxin family protein, putativechromosome CDS196283 516 - 0.69186
NA Tbd_2790 thiol:disulfide interchange protein DsbDchromosome CDS2869969 1770 - 0.702825
NA Tbd_1585 conserved hypothetical proteinchromosome CDS1669440 1095 - 0.653881
NA Tbd_0223 thioredoxinchromosome CDS246134 378 - 0.60582
NA Tbd_0167 glutaredoxin family proteinchromosome CDS181685 393 - 0.671756
NA Tbd_0836 Protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS886713 681 + 0.697504
NA Tbd_2071 hypothetical proteinchromosome CDS2163991 573 - 0.530541
NA Tbd_1859 putative FKBP-type peptidyl-prolyl cis-trans isomerases 2chromosome CDS1953896 438 + 0.646119
NA Tbd_0186 probable cytochrome c-type biogenesis proteinchromosome CDS198000 2013 - 0.632389
NA Tbd_1383 Hydrogenase accessory protein HypBchromosome CDS1461479 807 + 0.662949
NA Tbd_1999 heat shock protein DnaJchromosome CDS2087562 1185 - 0.664979
NA Tbd_1904 peptidyl-prolyl cis-trans isomerase Bchromosome CDS2000887 492 + 0.609756
NA Tbd_2431 putative thioredoxinchromosome CDS2501871 495 - 0.634343
NA Tbd_2384 o-sialoglycoprotein endopeptidasechromosome CDS2456410 1026 - 0.681287
NA Tbd_2727 conserved hypothetical proteinchromosome CDS2805408 2022 - 0.692878
NA Tbd_1445 putative heat shock proteinchromosome CDS1530610 504 - 0.640873
NA Tbd_1219 conserved hypothetical proteinchromosome CDS1273056 777 - 0.680824
NA Tbd_0272 thioredoxin family proteinchromosome CDS291988 549 - 0.695811
NA Tbd_2185 conserved hypothetical proteinchromosome CDS2267257 894 - 0.701342
NA Tbd_2043 leucyl/phenylalanyl-tRNA--protein transferasechromosome CDS2131059 687 - 0.685589
NA Tbd_1385 Hydrogenase maturation protein HypFchromosome CDS1463375 2262 + 0.70336
NA Tbd_1386 Hydrogenase expression/formation protein HypEchromosome CDS1465633 1008 + 0.69246
NA Tbd_2541 putative heat shock proteinchromosome CDS2611434 567 + 0.636684
NA Tbd_1539 molecular chaperone protein DnaJchromosome CDS1624446 1119 + 0.659517
NA Tbd_1604 flagellar protein FliJchromosome CDS1689799 450 + 0.66
NA Tbd_0965 DNA repair protein RadAchromosome CDS1027097 1353 + 0.687361
NA Tbd_2787 thiol:disulfide interchange protein DsbGchromosome CDS2867816 765 - 0.649673
NA Tbd_0846 probable glutathione S-transferasechromosome CDS895751 609 + 0.63711
NA Tbd_2312 small heat shock proteinchromosome CDS2386879 450 + 0.604444
NA Tbd_2090 conserved hypothetical proteinchromosome CDS2182567 246 - 0.723577
NA Tbd_1538 molecular chaperone protein DnaKchromosome CDS1622414 1920 + 0.641667
NA Tbd_2632 methionine sulfoxide reductase Achromosome CDS2704393 678 - 0.676991
NA Tbd_1050 glutathione S-transferase family proteinchromosome CDS1114716 792 - 0.642677
NA Tbd_1798 hypothetical proteinchromosome CDS1899402 951 - 0.62776
NA Tbd_0913 hypothetical proteinchromosome CDS969188 639 + 0.647887
NA Tbd_1033 probable collagenasechromosome CDS1097808 2004 + 0.667166
NA Tbd_1429 thiol-disulfide isomerase/thioredoxinchromosome CDS1518771 234 + 0.653846
NA Tbd_2077 putative Zn-dependent proteasechromosome CDS2170452 1011 + 0.71909
NA Tbd_0643 Cytochrome c oxidase cbb3-type, subunit Ichromosome CDS681042 1422 - 0.623066
NA Tbd_0490 stomatin-like transmembrane protein, Band 7 proteinchromosome CDS509314 759 - 0.648221
NA Tbd_1537 molecular chaperone protein GrpEchromosome CDS1621818 522 + 0.651341
NA Tbd_2426 hypothetical proteinchromosome CDS2495696 354 + 0.666667
NA Tbd_1133 peptidase M41, FtsHchromosome CDS1187620 1893 + 0.651347
NA Tbd_1381 hydrogenase expression/formation protein (HUPF/HYPC)chromosome CDS1460875 231 + 0.614719
NA Tbd_2542 Heat shock protein HslUchromosome CDS2612084 1317 + 0.666667
NA Tbd_2606 putative thioredoxin-like proteinchromosome CDS2681236 411 - 0.649635
NA Tbd_2170 putative pyruvate radical-activating enzymechromosome CDS2254795 690 - 0.695652
NA Tbd_2173 hypothetical proteinchromosome CDS2258325 258 + 0.682171
NA Tbd_1834 putative proteasechromosome CDS1932987 1191 + 0.665827
NA Tbd_2368 prepilin cysteine protease (C20) PilDchromosome CDS2441941 852 - 0.673709
NA Tbd_0847 methionine sulfoxide reductase Achromosome CDS896416 534 + 0.625468
NA Tbd_0815 ClpB proteinchromosome CDS855994 2580 + 0.661628
NA Tbd_2788 putative thiol:disulfide interchange proteinchromosome CDS2868573 588 - 0.678571
NA Tbd_1254 conserved hypothetical proteinchromosome CDS1317442 234 - 0.623932
NA Tbd_0750 disulfide bond chaperone, Hsp33 familychromosome CDS794865 894 + 0.701342
NA Tbd_2047 peptidyl-prolyl cis-trans isomerasechromosome CDS2135609 660 + 0.672727
NA Tbd_0338 Cytochrome c oxidase cbb3-type, subunit Ichromosome CDS357340 1455 + 0.602062
NA Tbd_0491 probable transmembrane proteinchromosome CDS510065 1341 - 0.692767
NA Tbd_2400 glutaredoxin, GrxCchromosome CDS2474079 264 + 0.67803
NA Tbd_0801 conserved hypothetical proteinchromosome CDS843117 396 - 0.676768
NA Tbd_2142 thioredoxin-related proteinchromosome CDS2228287 492 - 0.630081
NA Tbd_2499 Glutaredoxin-related proteinchromosome CDS2571495 321 + 0.5919
NA Tbd_0519 thioredoxinchromosome CDS549007 843 + 0.691578
NA Tbd_0097 serine protease, trypsin familychromosome CDS103358 888 - 0.689189
NA Tbd_1673 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS1758762 1944 - 0.654835
NA Tbd_0783 Metal dependent phosphohydrolase, HD regionchromosome CDS824946 2553 - 0.686251
NA Tbd_2559 thiol:disulfide interchange protein DsbDchromosome CDS2633554 2259 - 0.674635
NA Tbd_1370 small heat shock proteinchromosome CDS1451163 435 + 0.625287
NA Tbd_2042 arginyl-tRNA:protein arginyltransferasechromosome CDS2130337 723 - 0.654219
NA Tbd_0604 HflCchromosome CDS632722 882 + 0.60771
NA Tbd_1252 peptidase S16, ATP-dependent protease Lachromosome CDS1314391 2394 + 0.648287
NA Tbd_1372 conserved hypothetical proteinchromosome CDS1453581 342 + 0.614035
NA Tbd_0067 hypothetical proteinchromosome CDS69883 657 - 0.715373
NA Tbd_1629 mannosyl-glycoproteinendo-beta-N-acetylglucosamidasechromosome CDS1715795 885 - 0.712994
NA Tbd_0036 thioredoxinchromosome CDS38365 327 + 0.571865
NA Tbd_0024 conserved hypothetical proteinchromosome CDS25961 276 + 0.637681
NA Tbd_2152 peptidyl-prolyl cis-trans isomerasechromosome CDS2239119 327 + 0.678899
NA Tbd_1692 putative ATPasechromosome CDS1781871 969 + 0.600619
NA Tbd_2117 conserved hypothetical proteinchromosome CDS2205947 507 - 0.599606
NA Tbd_0457 conserved hypothetical proteinchromosome CDS473902 1119 - 0.687221
NA Tbd_1168 Fe-S protein assembly chaperone HscAchromosome CDS1220644 1863 + 0.674718
NA Tbd_0484 conserved hypothetical proteinchromosome CDS504922 486 + 0.674897
NA Tbd_1640 putative flagella synthesis protein FlgNchromosome CDS1724093 477 + 0.672956
NA Tbd_1638 putative flagella basal body P-ring formation proteinchromosome CDS1722999 714 + 0.72549
NA Tbd_0451 OsmC/Ohr family proteinchromosome CDS470086 417 - 0.621103
NA Tbd_0739 ABC transport protein ATPase componentchromosome CDS782091 1875 + 0.6784
NA Tbd_0908 possible signal peptide proteinchromosome CDS964055 483 + 0.687371
NA Tbd_1384 hydrogenase expression/formation protein HypDchromosome CDS1462285 1098 + 0.687614
NA Tbd_0603 HflKchromosome CDS631538 1188 + 0.655724
NA Tbd_1532 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS1617380 825 + 0.655758
NA Tbd_2280 putative peptidyl-prolyl cis-trans isomerasechromosome CDS2353694 510 - 0.596078
NA Tbd_2789 probable thiol:disulfide interchange proteinchromosome CDS2869157 810 - 0.711111
NA Tbd_1676 ClpX, ATPase regulatory subunitchromosome CDS1764004 1272 - 0.623428
NA Tbd_0886 putative thioredoxin proteinchromosome CDS935067 864 - 0.672454
NA Tbd_1982 conserved hypothetical proteinchromosome CDS2073570 240 - 0.591667
NA Tbd_0975 FKBP-type peptidyl-prolyl cis-trans isomerase (Rotamase) proteinchromosome CDS1040336 486 + 0.635802
NA Tbd_1560 proteasechromosome CDS1642916 942 - 0.658174
NA Tbd_0503 putative glutamate-ammonia-ligase adenylyltransferasechromosome CDS525926 2685 - 0.701676
NA Tbd_0937 conserved hypothetical proteinchromosome CDS997285 2736 + 0.625
NA Tbd_1451 conserved hypothetical proteinchromosome CDS1534889 492 + 0.628049
NA Tbd_2331 thiol:disulfide interchange protein DsbCchromosome CDS2404727 711 - 0.631505
NA Tbd_0334 putative cytochrome aa3 oxidase assembly protein,related to CtaAchromosome CDS354192 984 + 0.677846
NA Tbd_0328 probable cytochrome C oxidase assembly transmembrane proteinchromosome CDS350941 549 + 0.642987
NA Tbd_0092 chaperonin GroES (Hsp10, Cpn10))chromosome CDS98205 291 - 0.604811
NA Tbd_0574 conserved hypothetical proteinchromosome CDS603456 228 + 0.539474
NA Tbd_1237 ATP-dependent Clp protease, ATP-binding subunitchromosome CDS1297664 2253 + 0.642699
NA Tbd_1105 methionine sulfoxide reductase Bchromosome CDS1163588 399 - 0.671679
NA Tbd_2784 thiol:disulfide interchange protein DsbAchromosome CDS2865634 651 + 0.643625
NA Tbd_1847 conserved hypothetical proteinchromosome CDS1941916 573 - 0.645724
NA Tbd_1167 Co-chaperone Hsc20chromosome CDS1220114 528 + 0.632576
NA Tbd_2401 thioredoxinchromosome CDS2474424 429 + 0.694639