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2024-05-26 01:54:26

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Desulfovibrio desulfuricans G20, G20

Number of genes found: 135

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Desulfovibrio desulfuricans G20, G20
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Dde_1912 hypothetical protein chromosome CDS1965276 234 + 0.623932
NA Dde_0059 ADP-ribosylglycohydrolase family proteinSubName: Full=ADP-ribosylation/Crystallin J1; Flags: Precursor; chromosome CDS50025 906 - 0.626932
NA Dde_1203 thioredoxin reductaseSubName: Full=Thioredoxin-disulfide reductase; EC=1.8.1.9; chromosome CDS1230259 918 + 0.584967
NA Dde_0645 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS665173 396 + 0.593434
NA Dde_2151 thioredoxin reductase, putativeSubName: Full=Thioredoxin-disulfide reductase; EC=1.8.1.9; chromosome CDS2196462 894 + 0.504474
NA Dde_3416 thioredoxinSubName: Full=Thioredoxin; EC=1.8.1.8; chromosome CDS3377992 441 + 0.605442
NA Dde_0248 Heat shock protein DnaJRecName: Full=Chaperone protein DnaJ; chromosome CDS231261 1128 + 0.611702
NA Dde_1343 heat shock protein, HSP20 familySubName: Full=Heat shock protein Hsp20; chromosome CDS1361551 408 + 0.414216
NA Dde_1559 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1578084 486 + 0.557613
NA Dde_1478 cytochrome c-type biogenesis protein CcmESubName: Full=Cytochrome c biogenesis protein CcmE; Flags: Precursor; chromosome CDS1498280 414 - 0.538647
NA Dde_0555 (NiFe) hydrogenase maturation protein HypFSubName: Full=(NiFe) hydrogenase maturation protein HypF; chromosome CDS575543 2334 - 0.61868
NA Dde_2007 ATP-dependent protease, putativeSubName: Full=Peptidase S16 lon domain protein; chromosome CDS2048540 2490 - 0.514056
NA Dde_1445 ATPaseSubName: Full=ABC transporter related protein; chromosome CDS1469529 783 - 0.560664
NA Dde_2014 heat shock protein HslVU, ATPase subunit HslURecName: Full=ATP-dependent protease ATPase subunit HslU; AltName: Full=Unfoldase HslU; chromosome CDS2056343 1350 + 0.531111
NA Dde_2313 thiol peroxidaseRecName: Full=Probable thiol peroxidase; EC=1.11.1.-; chromosome CDS2330431 516 + 0.565891
NA Dde_2124 ATP-dependent protease HslVRecName: Full=ATP-dependent protease subunit HslV; EC=3.4.25.2; chromosome CDS2173613 543 + 0.570902
NA Dde_0036 Band 7 protein chromosome CDS28150 813 - 0.527675
NA Dde_2218 ATP-dependent protease LaRecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; chromosome CDS2257812 2460 - 0.549594
NA Dde_2068 metalloendopeptidase, putative, glycoprotease familyRecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; chromosome CDS2111181 1104 - 0.570652
NA Dde_0060 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS51082 498 - 0.487952
NA Dde_0058 peptidase, U32 family chromosome CDS47667 2247 + 0.622608
NA Dde_1027 bacterioferritin comigratory protein, putativeSubName: Full=Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; chromosome CDS1052040 492 - 0.589431
NA Dde_3510 Putative Zn-dependent protease contains TPR repeats-likeSubName: Full=Peptidase M48 Ste24p; chromosome CDS3469943 1113 + 0.628931
NA Dde_0305 AhpC/TSA family proteinSubName: Full=Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Flags: Precursor; chromosome CDS294444 621 - 0.62963
NA Dde_2781 thioredoxin chromosome CDS2781342 264 + 0.507576
NA Dde_0107 lipoprotein, putativeSubName: Full=Peptidase M48 Ste24p; Flags: Precursor; chromosome CDS97828 789 + 0.593156
NA Dde_0678 Rhodanese-likeSubName: Full=Rhodanese-like protein; Flags: Precursor; chromosome CDS694001 1206 - 0.633499
NA Dde_1173 Heat shock protein-like chromosome CDS1200078 474 + 0.588608
NA Dde_1477 cytochrome c-type biogenesis protein CcmFSubName: Full=Cytochrome c assembly protein; Flags: Precursor; chromosome CDS1496227 1926 - 0.580997
NA Dde_3419 peptidase, M48 familySubName: Full=Peptidase M48 Ste24p; chromosome CDS3382058 966 + 0.681159
NA Dde_2161 peptidase, M48 familySubName: Full=Peptidase M48 Ste24p; chromosome CDS2205624 960 - 0.614583
NA Dde_0363 Hydrogenase expression/formation protein HypESubName: Full=Hydrogenase expression/formation protein HypE; chromosome CDS354033 1023 - 0.619746
NA Dde_3415 ATP-dependent metalloprotease FtsHRecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; chromosome CDS3376112 1884 + 0.619427
NA Dde_3091 heat shock protein, HSP20 familySubName: Full=Heat shock protein Hsp20; chromosome CDS3081172 369 - 0.569106
NA Dde_2473 Chaperonin Cpn60/TCP-1RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; chromosome CDS2492742 1647 - 0.574378
NA Dde_0163 DSBA-like thioredoxin domain proteinSubName: Full=DSBA oxidoreductase; Flags: Precursor; chromosome CDS149027 813 + 0.569496
NA Dde_0278 radical SAM domain proteinSubName: Full=Anaerobic ribonucleoside-triphosphate reductase activating enzyme; chromosome CDS271191 717 - 0.595537
NA Dde_3776 PDZ/DHR/GLGF chromosome CDS3718647 1452 - 0.612259
NA Dde_3515 formate dehydrogenase formation protein FdhE, putativeSubName: Full=Formate dehydrogenase accessory protein; chromosome CDS3475743 924 + 0.638528
NA Dde_1301 Thiol:disulfide interchange protein-like chromosome CDS1319763 1920 - 0.588021
NA Dde_3054 Radical-activating enzymeSubName: Full=Glycyl-radical enzyme activating protein family; EC=1.97.1.4; chromosome CDS3044363 909 + 0.493949
NA Dde_1662 peptidyl-prolyl cis-trans isomerase BRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS1715674 495 + 0.50505
NA Dde_3420 PDZ/DHR/GLGFSubName: Full=Peptidase S1 and S6 chymotrypsin/Hap; chromosome CDS3383048 1152 + 0.654514
NA Dde_1442 signal peptide peptidase SppA, 36K typeSubName: Full=Signal peptide peptidase SppA, 36K type; Flags: Precursor; chromosome CDS1466697 963 + 0.570093
NA Dde_1513 ATP-dependent metalloprotease FtsHRecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; chromosome CDS1532051 1998 + 0.582082
NA Dde_1025 heat shock protein GrpERecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; chromosome CDS1050141 585 - 0.617094
NA Dde_0704 Methionine sulfoxide reductase BRecName: Full=Peptide methionine sulfoxide reductase MsrB; EC=1.8.4.12; AltName: Full=Peptide-methionine (R)-S-oxide reductase; Flags: Precursor; chromosome CDS722977 576 - 0.524306
NA Dde_0706 formate dehydrogenase formation protein FdhE, putativeSubName: Full=Formate dehydrogenase accessory protein; chromosome CDS723932 882 + 0.592971
NA Dde_2444 ATP-dependent protease La chromosome CDS2464574 2430 + 0.564609
NA Dde_1002 peptide methionine sulfoxide reductaseRecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; chromosome CDS1027024 504 - 0.583333
NA Dde_1307 hydrogenase accessory protein HypBSubName: Full=Hydrogenase accessory protein HypB; chromosome CDS1326731 660 - 0.559091
NA Dde_0464 thioredoxin, putativeSubName: Full=Glutaredoxin; chromosome CDS474811 312 + 0.567308
NA Dde_1393 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1410731 315 + 0.555556
NA Dde_3546 xanthine dehydrogenase accessory factorSubName: Full=XshC-Cox1-family protein; chromosome CDS3506639 1062 + 0.62806
NA Dde_2782 conserved hypothetical proteinSubName: Full=Cytochrome c biogenesis protein transmembrane region; chromosome CDS2781609 708 + 0.531073
NA Dde_2140 hydrogenase assembly chaperone hypC/hupFSubName: Full=Hydrogenase assembly chaperone hypC/hupF; chromosome CDS2187986 252 + 0.551587
NA Dde_2067 thioredoxinRecName: Full=Thioredoxin; chromosome CDS2110706 324 - 0.540123
NA Dde_1897 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1949439 357 + 0.498599
NA Dde_3412 small HspC2 heat shock proteinSubName: Full=Heat shock protein Hsp20; chromosome CDS3372076 570 + 0.598246
NA Dde_1119 flagellar protein FliSSubName: Full=Flagellar protein FliS; chromosome CDS1148730 861 - 0.614402
NA Dde_3095 peptidase, U32 familySubName: Full=Peptidase U32; chromosome CDS3083368 1350 + 0.644444
NA Dde_2219 ATP-dependent Clp protease, ATP-binding subunit ClpXRecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; chromosome CDS2260437 1254 - 0.536683
NA Dde_2848 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2834390 1146 + 0.601222
NA Dde_0364 hydrogenase expression/formation protein HypDSubName: Full=Hydrogenase expression/formation protein HypD; chromosome CDS355060 1092 - 0.617216
NA Dde_1659 Heat shock protein DnaJ-likeSubName: Full=Chaperone DnaJ domain protein; chromosome CDS1711529 948 + 0.580169
NA Dde_2947 HflC proteinRecName: Full=Protein HflC; Flags: Precursor; chromosome CDS2926563 849 + 0.557126
NA Dde_1738 small HspC2 heat shock proteinSubName: Full=Heat shock protein Hsp20; chromosome CDS1794309 570 - 0.498246
NA Dde_0306 conserved hypothetical protein chromosome CDS295070 642 - 0.566978
NA Dde_3154 Membrane proteins, metalloendopeptidases-likeSubName: Full=Peptidase M23; chromosome CDS3140501 1167 - 0.617823
NA Dde_1202 thioredoxin, putativeSubName: Full=Thioredoxin domain-containing protein; chromosome CDS1229880 309 + 0.559871
NA Dde_2474 chaperonin, 10 kDaRecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; chromosome CDS2494437 288 - 0.559028
NA Dde_1474 cytochrome c-type biogenesis protein CcmCSubName: Full=Cytochrome c assembly protein; chromosome CDS1494172 693 - 0.584416
NA Dde_2798 small HspC2 heat shock proteinSubName: Full=Heat shock protein Hsp20; chromosome CDS2789842 570 + 0.5
NA Dde_1670 radical SAM domain proteinSubName: Full=Radical SAM domain protein; chromosome CDS1723137 1020 - 0.553922
NA Dde_3157 FlgA family protein chromosome CDS3143532 1032 - 0.637597
NA Dde_2808 competence protein ComM, putativeSubName: Full=Magnesium chelatase ChlI subunit; chromosome CDS2796212 687 - 0.612809
NA Dde_0210 AhpF family protein/thioredoxin reductaseSubName: Full=Thioredoxin-disulfide reductase; EC=1.8.1.9; chromosome CDS189360 1653 + 0.578342
NA Dde_1444 conserved hypothetical proteinSubName: Full=SufBD protein; chromosome CDS1468365 1161 - 0.573643
NA Dde_1272 Radical-activating enzymeSubName: Full=Glycyl-radical enzyme activating protein family; EC=1.97.1.4; chromosome CDS1288657 930 - 0.567742
NA Dde_3307 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3293425 675 + 0.56
NA Dde_1051 peptidase, M48 familyRecName: Full=Protease HtpX homolog; EC=3.4.24.-; Flags: Precursor; chromosome CDS1079159 852 - 0.588028
NA Dde_2850 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2836988 1056 + 0.617424
NA Dde_3092 heat shock protein, HSP20 familySubName: Full=Heat shock protein Hsp20; chromosome CDS3081565 417 - 0.582734
NA Dde_3413 ATPaseSubName: Full=ATPase AAA-2 domain protein; chromosome CDS3372738 2850 + 0.649123
NA Dde_1121 glycoprotease family protein, putativeSubName: Full=Peptidase M22 glycoprotease; chromosome CDS1151606 846 - 0.6513
NA Dde_2066 thioredoxin-disulfide reductase chromosome CDS2109783 879 - 0.531286
NA Dde_1661 ATPaseSubName: Full=ATP-dependent chaperone ClpB; chromosome CDS1712857 2592 + 0.569444
NA Dde_0465 thioredoxin reductaseSubName: Full=Thioredoxin-disulfide reductase; EC=1.8.1.9; chromosome CDS475154 918 + 0.652505
NA Dde_2560 alkyl hydroperoxide reductaseRecName: Full=Peroxiredoxin; EC=1.11.1.15; chromosome CDS2578541 648 + 0.526235
NA Dde_0209 Peptidylprolyl isomeraseRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS188690 510 - 0.535294
NA Dde_2739 hypothetical proteinSubName: Full=Glutaredoxin; chromosome CDS2742215 360 - 0.516667
NA Dde_2038 conserved hypothetical proteinSubName: Full=SurA domain-containing protein; Flags: Precursor; chromosome CDS2079106 1008 - 0.560516
NA Dde_1302 Heat shock protein DnaJ-likeSubName: Full=Heat shock protein DnaJ domain protein; chromosome CDS1321939 831 - 0.598075
NA Dde_0508 signal peptide peptidase SppA, 36K type chromosome CDS516654 843 + 0.615658
NA Dde_2010 peptidyl-prolyl cis-trans isomerase CSubName: Full=PpiC-type peptidyl-prolyl cis-trans isomerase; chromosome CDS2051634 282 - 0.528369
NA Dde_1407 peptidyl-prolyl cis-trans isomerse domain proteinSubName: Full=PpiC-type peptidyl-prolyl cis-trans isomerase; chromosome CDS1424903 1890 + 0.560847
NA Dde_1003 Methionine sulfoxide reductase B chromosome CDS1027531 561 - 0.545455
NA Dde_2309 metal dependent phosphohydrolaseRecName: Full=Bifunctional uridylyltransferase/uridylyl-removing enzyme; Short=UTase/UR; AltName: Full=Bifunctional [protein-PII] modification enzyme; AltName: Full=Bifunctional nitrogen sensor protein; chromosome CDS2325889 2619 - 0.613975
NA Dde_1827 protoheme IX farnesyltransferase, putativeRecName: Full=Protoheme IX farnesyltransferase; EC=2.5.1.-; AltName: Full=Heme B farnesyltransferase; AltName: Full=Heme O synthase; chromosome CDS1876193 849 + 0.601885
NA Dde_0768 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS792605 375 - 0.616
NA Dde_2946 HflK proteinSubName: Full=HflK protein; Flags: Precursor; chromosome CDS2925487 1080 + 0.560185
NA Dde_0713 hypothetical protein chromosome CDS731817 669 + 0.641256
NA Dde_1234 hypothetical protein chromosome CDS1253302 342 + 0.491228
NA Dde_1088 SsrA-binding proteinRecName: Full=SsrA-binding protein; chromosome CDS1118952 468 - 0.532051
NA Dde_0914 hypothetical protein chromosome CDS941156 234 - 0.623932
NA Dde_2077 protein-L-isoaspartate O-methyltransferaseRecName: Full=Protein-L-isoaspartate O-methyltransferase; EC=2.1.1.77; AltName: Full=L-isoaspartyl protein carboxyl methyltransferase; AltName: Full=Protein L-isoaspartyl methyltransferase; AltName: Full=Protein-beta-aspartate methyltransferase; Short=PIMT; chromosome CDS2118551 642 - 0.5919
NA Dde_2358 membrane protein, putativeSubName: Full=Peptidase A24A prepilin type IV; chromosome CDS2379930 558 + 0.623656
NA Dde_1344 heat shock protein, HSP20 familySubName: Full=Heat shock protein Hsp20; chromosome CDS1361972 366 + 0.494536
NA Dde_2222 trigger factorRecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; chromosome CDS2262649 1317 - 0.534548
NA Dde_2220 ATP-dependent Clp protease, proteolytic subunit ClpPRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS2261703 603 - 0.533997
NA Dde_2705 putative flagellar FliJ proteinSubName: Full=Flagellar export protein FliJ; chromosome CDS2707717 444 + 0.563063
NA Dde_2110 DNA repair protein RadARecName: Full=DNA repair protein radA; chromosome CDS2159210 1359 - 0.597498
NA Dde_2013 Peptidase S1C, DoSubName: Full=Protease Do; EC=3.4.21.108; Flags: Precursor; chromosome CDS2054696 1443 + 0.572419
NA Dde_2114 thioredoxin family proteinSubName: Full=Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Flags: Precursor; chromosome CDS2162411 480 - 0.5625
NA Dde_0834 lipoprotein, putativeSubName: Full=PEP-CTERM system associated protein; Flags: Precursor; chromosome CDS860553 1263 + 0.557403
NA Dde_2037 peptidyl-prolyl cis-trans isomerase domain protein chromosome CDS2078040 990 - 0.541414
NA Dde_2626 ATP-dependent protease, putativeSubName: Full=Peptidase S16, lon domain-containing protein; chromosome CDS2640953 2412 + 0.580431
NA Dde_1023 Heat shock protein Hsp70RecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; chromosome CDS1047263 1914 - 0.567921
NA Dde_0037 putative membrane protein necessary for nodulation competitivenessSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS28946 1359 - 0.579838
NA Dde_0070 Ste24 endopeptidaseSubName: Full=Ste24 endopeptidase; EC=3.4.24.84; chromosome CDS60822 1284 + 0.59891
NA Dde_2778 redox-active disulfide protein 2SubName: Full=Redox-active disulfide protein 2; chromosome CDS2780537 231 + 0.510823
NA Dde_1855 Zn-dependent protease with chaperone function-likeSubName: Full=Peptidase M48 Ste24p; chromosome CDS1904620 939 - 0.556975
NA Dde_2330 hypothetical proteinSubName: Full=Methyltransferase type 11; chromosome CDS2348114 1212 - 0.604786
NA Dde_2668 peptidyl-prolyl cis-trans isomerase, FKBP-typeRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS2680386 423 + 0.574468
NA Dde_2098 leucyl/phenylalanyl-tRNA--protein transferaseRecName: Full=Leucyl/phenylalanyl-tRNA--protein transferase; EC=2.3.2.6; AltName: Full=L/F-transferase; AltName: Full=Leucyltransferase; AltName: Full=Phenyalanyltransferase; chromosome CDS2147717 747 - 0.605087
NA Dde_2099 ATPaseSubName: Full=ATP-dependent Clp protease, ATP-binding subunit clpA; chromosome CDS2148490 2283 - 0.55979
NA Dde_2773 competence protein ComM, putativeSubName: Full=Magnesium chelatase ChlI subunit; chromosome CDS2776007 876 - 0.610731
NA Dde_2008 heat shock protein, HSP20 family chromosome CDS2051041 369 - 0.552846
NA Dde_1959 conserved hypothetical proteinSubName: Full=Selenium metabolism protein YedF; chromosome CDS2007091 627 - 0.53748
NA Dde_0580 cytochrome c family proteinSubName: Full=Cytochrome c; Flags: Precursor; chromosome CDS604570 759 + 0.559947
NA Dde_3281 Radical-activating enzyme chromosome CDS3270700 963 - 0.561786
NA Dde_2858 cytochrome c family proteinSubName: Full=Cytochrome c family protein; Flags: Precursor; chromosome CDS2847139 462 - 0.558442
NA Dde_1311 Peroxiredoxin-likeSubName: Full=Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; chromosome CDS1329789 654 + 0.573394
NA Dde_2482 peptide methionine sulfoxide reductaseRecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Flags: Precursor; chromosome CDS2502566 642 + 0.587227
NA Dde_1147 heat shock protein HtpGRecName: Full=Chaperone protein HtpG; AltName: Full=Heat shock protein HtpG; AltName: Full=High temperature protein G; chromosome CDS1173145 1911 - 0.55259