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2024-04-30 09:30:23

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Shigella dysenteriae Sd197, Sd197

Number of genes found: 128

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SDY_2497 hypothetical proteinchromosome CDS2299591 321 - 0.52648
NA SDY_1951 putative transferasechromosome CDS1774574 609 - 0.472906
NA SDY_1436 antitermination protein Q homolog of cryptic prophagechromosome CDS1323419 822 + 0.492701
NA SDY_1863 conserved hypothetical proteinchromosome CDS1697994 1110 - 0.553153
NA SDY_3084 conserved hypothetical proteinchromosome CDS2858165 915 - 0.533333
NA SDY_2272 conserved hypothetical proteinchromosome CDS2068030 1005 + 0.555224
aat SDY_2376 leucyl, phenylalanyl-tRNA-protein transferasechromosome CDS2179234 705 + 0.539007
ahpC SDY_0540 alkyl hydroperoxide reductase, C22 subunitchromosome CDS525582 564 + 0.5
ahpF SDY_0541 alkyl hydroperoxide reductase, F52a subunitchromosome CDS526244 1596 + 0.526316
bcp SDY_2669 bacterioferritin comigratory proteinchromosome CDS2460067 471 + 0.494692
btuE SDY_1805 vitamin B12 transport proteinchromosome CDS1642626 552 - 0.490942
cbpA SDY_0974 curved DNA-binding proteinchromosome CDS924045 921 - 0.527687
ccmA SDY_0877 ATP binding protein of heme exporter Achromosome CDS826322 618 + 0.550162
ccmB SDY_0878 heme exporter protein Bchromosome CDS826936 663 + 0.555053
ccmC SDY_0879 heme exporter protein Cchromosome CDS827640 738 + 0.547425
ccmE SDY_0881 cytochrome c biogenesischromosome CDS828580 480 + 0.535417
ccmF SDY_0882 cytochrome c-type biogenesis proteinchromosome CDS829056 1944 + 0.569959
ccmH SDY_0884 possible subunit of heme lyasechromosome CDS831550 1053 + 0.534663
clpA SDY_2379 ATP-binding component of serine proteasechromosome CDS2181125 2277 - 0.524374
clpB SDY_2835 heat shock proteinchromosome CDS2627369 2574 - 0.511267
clpP SDY_0295 ATP-dependent proteolytic subunit of clpA-clpP serine proteasechromosome CDS288947 624 - 0.508013
clpX SDY_0294 ATP-dependent specificity component of clpP serine proteasechromosome CDS287547 1275 - 0.512157
cydC SDY_2375 ATP-binding component of cytochrome-related transportchromosome CDS2177471 1722 + 0.537166
cydD SDY_2374 ATP-binding component of cytochrome-related transport, Zn sensitivechromosome CDS2175704 1767 + 0.532541
cysU SDY_2620 sulfate, thiosulfate transport system permease T proteinchromosome CDS2414180 834 - 0.558753
degQ SDY_3410 serine endoproteasechromosome CDS3164762 1368 + 0.522661
degS SDY_3411 proteasechromosome CDS3166219 1068 + 0.525281
dnaJ SDY_0014 heat shock proteinchromosome CDS14160 1131 + 0.55084
dnaK SDY_0013 chaperone Hsp70chromosome CDS12155 1917 + 0.512259
dsbA SDY_3885 protein disulfide isomerase Ichromosome CDS3616601 627 - 0.476874
dsbB SDY_1222 DsbBchromosome CDS1127260 531 - 0.519774
dsbC SDY_3189 protein disulfide isomerase IIchromosome CDS2955221 711 + 0.483826
dsbD SDY_4441 thiol:disulfide interchange proteinchromosome CDS4154160 1698 - 0.541814
dsbE SDY_0883 disulfide oxidoreductasechromosome CDS830996 558 + 0.541219
fdhE SDY_3852 affects formate dehydrogenase-Nchromosome CDS3585795 930 + 0.547312
fklB SDY_4377 FKBP-type 22KD peptidyl-prolyl cis-trans isomerasechromosome CDS4097338 780 + 0.521795
fkpA SDY_3508 FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS3243939 795 - 0.480503
flgA SDY_2080 assembly of basal-body periplasmic P ringchromosome CDS1890612 660 + 0.527273
flgJ SDY_2070 FlgJchromosome CDS1882427 942 - 0.542463
fliS SDY_1090 repressor of class 3a and 3b operonschromosome CDS1017681 411 - 0.498783
glnD SDY_0183 protein PIIchromosome CDS186240 2673 - 0.535354
glnE SDY_3236 adenylylating enzyme for glutamine synthetasechromosome CDS2996917 2841 - 0.56107
grpE SDY_2787 GrpEchromosome CDS2581627 594 - 0.5
grxA SDY_0746 glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductasechromosome CDS693847 258 + 0.46124
grxB SDY_2089 glutaredoxin 2chromosome CDS1898185 648 + 0.487654
grxC SDY_4043 glutaredoxin 3chromosome CDS3779972 252 - 0.52381
gst SDY_1858 glutathionine S-transferasechromosome CDS1693878 606 + 0.50165
hflB SDY_3359 HflBchromosome CDS3116406 1935 - 0.534367
hflC SDY_4414 protease specific for phage lambda cII repressorchromosome CDS4129523 1005 - 0.527363
hflK SDY_4415 protease specific for phage lambda cII repressorchromosome CDS4130530 1260 - 0.564286
hscA SDY_2722 HscAchromosome CDS2520692 1851 - 0.576985
hslU SDY_3806 heat shock protein hslVU, ATPase subunitchromosome CDS3545007 1332 + 0.524024
hslV SDY_3805 heat shock protein hslVU, proteasome-related peptidase subunitchromosome CDS3544467 531 + 0.516008
htpG SDY_0446 chaperone Hsp90chromosome CDS436521 1875 - 0.524267
htpX SDY_1977 heat shock proteinchromosome CDS1796191 882 - 0.53288
htrA SDY_0178 periplasmic serine protease Dochromosome CDS181864 1425 + 0.537544
hyaE SDY_0951 processor of HyaA and HyaB proteinschromosome CDS898998 399 + 0.553885
hybG SDY_3083 hydrogenase-2 operon proteinchromosome CDS2857794 249 + 0.526104
hypB SDY_2924 guanine-nucleotide binding proteinchromosome CDS2705500 873 + 0.550974
hypC SDY_2925 pleiotrophic effects on 3 hydrogenase isozymeschromosome CDS2706363 273 + 0.549451
hypD SDY_2926 pleiotrophic effects on 3 hydrogenase isozymeschromosome CDS2706635 1122 + 0.551693
hypE SDY_2927 HypEchromosome CDS2707795 969 + 0.575851
hypF SDY_2909 transcriptional regulatory proteinchromosome CDS2689899 2253 - 0.57257
ibpA SDY_4173 heat shock proteinchromosome CDS3906871 414 - 0.475845
ibpB SDY_4172 heat shock proteinchromosome CDS3906331 435 - 0.48046
lon SDY_0293 DNA-binding, ATP-dependent protease Lachromosome CDS284921 2439 - 0.514965
mopA SDY_4449 GroELchromosome CDS4162613 1647 + 0.530662
mopB SDY_4448 GroESchromosome CDS4162276 294 + 0.493197
msrA SDY_4456 peptide methionine sulfoxide reductasechromosome CDS4169134 639 - 0.536776
nrdG SDY_4256 anaerobic ribonucleotide reductase activating proteinchromosome CDS3985429 465 - 0.505376
nrdH SDY_2866 glutaredoxin-like proteinchromosome CDS2651587 246 + 0.53252
osmC SDY_1610 osmotically inducible proteinchromosome CDS1472720 432 + 0.50463
pcm SDY_2942 L-isoaspartate protein carboxylmethyltransferase type IIchromosome CDS2722008 627 - 0.539075
pflA SDY_2359 pyruvate formate lyase activating enzyme 1chromosome CDS2154900 741 + 0.496626
pflC SDY_3787 probable pyruvate formate lyase activating enzyme 2chromosome CDS3520458 879 + 0.542662
ppiA SDY_3525 peptidyl-prolyl cis-trans isomerase Achromosome CDS3258767 573 - 0.509599
ppiB SDY_0277 peptidyl-prolyl cis-trans isomerase Bchromosome CDS271921 495 - 0.474747
ppiC SDY_3973 peptidyl-prolyl cis-trans isomerase Cchromosome CDS3704675 282 + 0.510638
ptr SDY_3038 protease IIIchromosome CDS2812624 2889 - 0.50848
slpA SDY_0050 probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerasechromosome CDS44578 450 + 0.542222
slyD SDY_3510 FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS3245221 579 - 0.552677
smpB SDY_2793 small protein Bchromosome CDS2586408 483 + 0.519669
sms SDY_4650 probable ATP-dependent proteasechromosome CDS4353598 1383 + 0.577007
sohB SDY_1342 putative proteasechromosome CDS1239881 1041 + 0.49952
sppA SDY_1507 protease IVchromosome CDS1378879 1857 - 0.519655
sspA SDY_3405 stringent starvation protein Achromosome CDS3160802 639 - 0.533646
surA SDY_0078 survival proteinchromosome CDS72538 1287 - 0.539239
tig SDY_0296 trigger factorchromosome CDS289815 1299 - 0.511932
tpx SDY_1402 thiol peroxidasechromosome CDS1295558 507 - 0.514793
trxA SDY_3968 thioredoxin 1chromosome CDS3697062 384 - 0.5
trxB SDY_2373 thioredoxin reductasechromosome CDS2174616 966 + 0.528986
trxC SDY_2825 putative thioredoxin-like proteinchromosome CDS2614591 420 + 0.5
yabH SDY_0080 putative DNA-binding proteinchromosome CDS76486 816 + 0.525735
yabK SDY_0094 putative transport system permease proteinchromosome CDS93380 1611 - 0.58473
ybaU SDY_0291 putative protease maturation proteinchromosome CDS282452 1872 - 0.520833
ybbJ SDY_0411 conserved hypothetical proteinchromosome CDS394660 459 + 0.586057
ybbK SDY_0410 putative proteasechromosome CDS393746 918 + 0.523965
ybbN SDY_0407 putative thioredoxin-like proteinchromosome CDS391204 891 + 0.5578
ybiY SDY_0763 putative pyruvate formate-lyase 2 activating enzymechromosome CDS709545 927 + 0.543689
ycaL SDY_2349 putative heat shock proteinchromosome CDS2142176 765 - 0.500654
ydcP SDY_1740 putative collagenasechromosome CDS1586198 1638 - 0.505495
ydhD SDY_1880 conserved hypothetical proteinchromosome CDS1714043 348 - 0.522988
yeaA SDY_1489 conserved hypothetical proteinchromosome CDS1365686 414 + 0.480676
yeaZ SDY_1711 conserved hypothetical proteinchromosome CDS1563682 696 - 0.556035
yedF SDY_1085 conserved hypothetical proteinchromosome CDS1013682 234 - 0.474359
yeeD SDY_2230 conserved hypothetical proteinchromosome CDS2033229 228 + 0.513158
yegD SDY_2193 putative heat shock proteinchromosome CDS1992465 1416 - 0.562147
yegQ SDY_2259 conserved hypothetical proteinchromosome CDS2054955 1362 + 0.541116
yfcF SDY_2498 conserved hypothetical proteinchromosome CDS2299912 324 - 0.487654
yfcG SDY_2499 putative S-transferasechromosome CDS2300371 648 + 0.520062
yfhE SDY_2723 conserved hypothetical proteinchromosome CDS2522559 516 - 0.517442
ygcF SDY_2981 conserved hypothetical proteinchromosome CDS2755549 672 - 0.513393
yggG SDY_3140 conserved hypothetical proteinchromosome CDS2908513 759 - 0.525692
yggX SDY_3110 conserved hypothetical proteinchromosome CDS2885303 276 - 0.467391
ygjD SDY_3248 putative O-sialoglycoprotein endopeptidasechromosome CDS3009833 1014 - 0.573964
yhbU SDY_3337 putative collagenasechromosome CDS3092197 996 + 0.572289
yhbV SDY_3338 conserved hypothetical proteinchromosome CDS3093183 897 + 0.556299
yhfA SDY_3518 conserved hypothetical proteinchromosome CDS3252456 405 - 0.51358
yhgI SDY_3662 conserved hypothetical proteinchromosome CDS3393204 576 - 0.529514
yhhP SDY_3621 conserved hypothetical proteinchromosome CDS3357439 246 - 0.51626
yibF SDY_4211 putative S-transferasechromosome CDS3941729 609 + 0.518883
yjjW SDY_4639 putative activating enzymechromosome CDS4342612 864 - 0.559028
yliJ SDY_0838 putative transferasechromosome CDS782376 633 - 0.518167
ynhC SDY_1912 conserved hypothetical proteinchromosome CDS1741492 1272 - 0.529874
ynhD SDY_1913 putative ATP-binding component of a transport systemchromosome CDS1742738 747 - 0.507363
ynhE SDY_1914 conserved hypothetical proteinchromosome CDS1743494 768 - 0.505208
yqjG SDY_3291 putative transferasechromosome CDS3053888 987 + 0.509625
yrfI SDY_3677 conserved hypothetical proteinchromosome CDS3409509 885 - 0.523164