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2024-04-28 17:37:52

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Escherichia coli W3110, K-12

Number of genes found: 143

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli W3110, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
aat leucyl/phenylalanyl-tRNA-protein transferasechromosome CDS927150 705 - 0.540426
ahpC alkyl hydroperoxide reductase, C22 subunitchromosome CDS638168 564 + 0.5
ahpF alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-bindingchromosome CDS638976 1566 + 0.53129
bcp thiol peroxidase, thioredoxin-dependentchromosome CDS2599134 471 + 0.494692
btuE predicted glutathione peroxidasechromosome CDS1795272 552 - 0.494565
cbpA curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaKchromosome CDS1063277 921 - 0.528773
ccmB heme exporter subunitchromosome CDS2299696 663 - 0.559578
ccmC heme exporter subunitchromosome CDS2298917 738 - 0.552846
ccmE periplasmic heme chaperonechromosome CDS2298235 480 - 0.535417
ccmF heme lyase, CcmF subunitchromosome CDS2296295 1944 - 0.570988
ccmG periplasmic thioredoxin of cytochrome c-type biogenesischromosome CDS2295741 558 - 0.544803
ccmH heme lyase, CcmH subunitchromosome CDS2294692 1053 - 0.540361
clpA ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activitychromosome CDS923686 2277 + 0.526131
clpB protein disaggregation chaperonechromosome CDS2730256 2574 - 0.514374
clpP proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteaseschromosome CDS455901 624 + 0.511218
clpX ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine proteasechromosome CDS456650 1275 + 0.515294
csgA cryptic curlin major subunitchromosome CDS1104688 456 + 0.510965
cydC fused cysteine transporter subunits and membrane component and ATP-binding component of ABC superfamilychromosome CDS927896 1722 - 0.537747
cydD fused cysteine transporter subunits and membrane component and ATP-binding component of ABC superfamilychromosome CDS929618 1767 - 0.536503
cyoE protoheme IX farnesyltransferasechromosome CDS446039 891 - 0.537598
cysU sulfate/thiosulfate transporter subunitchromosome CDS2547125 834 - 0.56235
degP serine endoprotease (protease Do), membrane-associatedchromosome CDS180884 1425 + 0.539649
degQ serine endoprotease, periplasmicchromosome CDS3380598 1368 + 0.520468
degS serine endoprotease, periplasmicchromosome CDS3382055 1068 + 0.527154
dipZ fused thiol:disulfide interchange proteinchromosome CDS4368023 1698 - 0.54417
djlA DnaJ-like protein, membrane anchoredchromosome CDS57364 816 + 0.526961
djlB predicted chaperonechromosome CDS677837 1428 + 0.47479
dnaJ chaperone Hsp40, co-chaperone with DnaKchromosome CDS14168 1131 + 0.551724
dnaK chaperone Hsp70, co-chaperone with DnaJchromosome CDS12163 1917 + 0.511215
dsbA periplasmic protein disulfide isomerase Ichromosome CDS3592637 627 - 0.480064
dsbB oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase Ichromosome CDS1234077 531 - 0.527307
dsbC protein disulfide isomerase IIchromosome CDS3036768 711 - 0.483826
dsbG periplasmic disulfide isomerase/thiol-disulphide oxidasechromosome CDS637050 747 - 0.468541
fdhE formate dehydrogenase formation proteinchromosome CDS3555453 930 + 0.546237
fklB FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS4433615 621 + 0.557166
fkpA FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS4162997 813 + 0.482165
fkpB FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS25826 450 + 0.544444
flgA assembly protein for flagellar basal-body periplasmic P ringchromosome CDS1131781 660 - 0.522727
flgJ muramidasechromosome CDS1138948 942 + 0.546709
flgN export chaperone for FlgK and FlgLchromosome CDS1130991 417 - 0.482014
fliJ flagellar proteinchromosome CDS2020083 444 + 0.515766
fliS flagellar protein potentiates polymerizationchromosome CDS2007440 411 + 0.498783
ftsH protease, ATP-dependent zinc-metallochromosome CDS3324856 1935 - 0.535917
glnD uridylyltransferasechromosome CDS185978 2673 - 0.539469
glnE fused deadenylyltransferase and adenylyltransferase for glutamine synthetasechromosome CDS3195457 2841 - 0.559662
gntY predicted gluconate transport associated proteinchromosome CDS4094217 576 - 0.532986
groL Cpn60 chaperonin GroEL, large subunit of GroESLchromosome CDS4375705 1647 + 0.52884
groS Cpn10 chaperonin GroES, small subunit of GroESLchromosome CDS4375368 294 + 0.486395
grpE heat shock proteinchromosome CDS2748771 594 - 0.503367
grxA glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a)chromosome CDS890918 258 - 0.449612
grxB glutaredoxin 2chromosome CDS1124984 648 - 0.490741
grxC glutaredoxin 3chromosome CDS3855973 252 + 0.52381
gspO bifunctional prepilin leader peptidase and methylasechromosome CDS4174196 678 - 0.504425
gst glutathionine S-transferasechromosome CDS1716091 606 + 0.504951
hflC modulator for HflB protease specific for phage lambda cII repressorchromosome CDS4407980 1005 + 0.530348
hflK modulator for HflB protease specific for phage lambda cII repressorchromosome CDS4406718 1260 + 0.561905
hscA DnaK-like molecular chaperone specific for IscUchromosome CDS2655741 1851 - 0.576985
hscB DnaJ-like molecular chaperone specific for IscUchromosome CDS2657608 516 - 0.523256
hscC Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcriptionchromosome CDS682145 1671 - 0.500299
hslJ heat-inducible proteinchromosome CDS1443035 423 - 0.468085
hslO heat shock protein Hsp33chromosome CDS4109764 879 - 0.52901
hslU molecular chaperone and ATPase component of HslUV proteasechromosome CDS3514934 1332 + 0.526276
hslV peptidase component of the HslUV proteasechromosome CDS3514394 531 + 0.527307
htpG molecular chaperone HSP90 familychromosome CDS494344 1875 + 0.528533
htpX predicted endopeptidasechromosome CDS1913409 882 - 0.535147
hyaE protein involved in processing of HyaA and HyaB proteinschromosome CDS1036776 399 + 0.566416
hybG hydrogenase 2 accessory proteinchromosome CDS3138372 249 - 0.522088
hypB GTP hydrolase involved in nickel liganding into hydrogenaseschromosome CDS2849657 873 + 0.552119
hypC protein required for maturation of hydrogenases 1 and 3chromosome CDS2850520 273 + 0.553114
hypD protein required for maturation of hydrogenaseschromosome CDS2850792 1122 + 0.554367
hypE carbamoyl phosphate phosphatase, hydrogenase 3 maturation proteinchromosome CDS2851952 969 + 0.570691
hypF carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenaseschromosome CDS2833829 2253 - 0.576121
ibpA heat shock chaperonechromosome CDS3772993 414 + 0.471014
ibpB heat shock chaperonechromosome CDS3773518 429 + 0.48951
lon DNA-binding ATP-dependent protease Lachromosome CDS458112 2355 + 0.523142
msrA methionine sulfoxide reductase Achromosome CDS4446218 639 - 0.544601
nrdG anaerobic ribonucleotide reductase activating proteinchromosome CDS4464580 465 - 0.509677
nrdH glutaredoxin-like proteinchromosome CDS2799379 246 + 0.53252
nrfE heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfEchromosome CDS4295102 1659 + 0.573237
nrfF heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfFchromosome CDS4296753 384 + 0.523438
nrfG heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfGchromosome CDS4297133 597 + 0.517588
osmC osmotically inducible, stress-inducible membrane proteinchromosome CDS1558339 432 + 0.5
pcm L-isoaspartate protein carboxylmethyltransferase type IIchromosome CDS2867549 627 - 0.53429
pflA pyruvate formate lyase activating enzyme 1chromosome CDS950762 741 - 0.503374
pflC pyruvate formate lyase II activasechromosome CDS3489545 879 - 0.549488
ppiA peptidyl-prolyl cis-trans isomerase Achromosome CDS4148119 573 + 0.511344
ppiB peptidyl-prolyl cis-trans isomerase Bchromosome CDS553166 495 - 0.478788
ppiC peptidyl-prolyl cis-trans isomerase Cchromosome CDS3676868 282 + 0.51773
ppiD peptidyl-prolyl cis-trans isomerasechromosome CDS461139 1872 + 0.523504
ptr protease IIIchromosome CDS2954652 2889 - 0.511596
radA predicted repair proteinchromosome CDS4630592 1383 + 0.577007
slyD FKBP-type peptidyl prolyl cis-trans isomerasechromosome CDS4161919 591 + 0.553299
smpB trans-translation proteinchromosome CDS2753552 483 + 0.517598
sohB predicted inner membrane peptidasechromosome CDS1331046 1050 + 0.505714
sppA protease IVchromosome CDS1850551 1857 + 0.517501
sra 30S ribosomal subunit protein S22chromosome CDS1557540 138 - 0.442029
sspA stringent starvation protein Achromosome CDS3376637 639 - 0.536776
sufB component of SufBCD complexchromosome CDS1764236 1488 - 0.515457
sufC component of SufBCD complex, ATP-binding component of ABC superfamilychromosome CDS1763480 747 - 0.504685
sufD component of SufBCD complexchromosome CDS1762234 1272 - 0.533019
surA peptidyl-prolyl cis-trans isomerasechromosome CDS53416 1287 - 0.538462
tig peptidyl-prolyl cis/trans isomerasechromosome CDS454357 1299 + 0.511932
tpx lipid hydroperoxide peroxidasechromosome CDS1390019 507 - 0.512821
trxA thioredoxin 1chromosome CDS3670591 330 - 0.509091
trxB thioredoxin reductase, FAD/NAD(P)-bindingchromosome CDS931507 966 - 0.536232
trxC thioredoxin 2chromosome CDS2717391 420 + 0.495238
yagQ conserved hypothetical proteinchromosome CDS296994 957 - 0.599791
ybbJ conserved inner membrane proteinchromosome CDS513625 456 - 0.574561
ybbK predicted protease, membrane anchoredchromosome CDS514080 918 - 0.528322
ybbN predicted thioredoxin domain-containing proteinchromosome CDS516649 855 - 0.559064
ybfN predicted lipoproteinchromosome CDS710212 327 + 0.480122
ybiY predicted pyruvate formate lyase activating enzymechromosome CDS863034 927 - 0.537217
ycaL predicted peptidase with chaperone functionchromosome CDS960686 765 + 0.499346
ycbZ predicted peptidasechromosome CDS1016961 1761 - 0.517888
ydcP predicted peptidasechromosome CDS1508495 1962 + 0.510703
ydfT predicted antitermination protein Qchromosome CDS1644203 753 - 0.479416
ydhD conserved hypothetical proteinchromosome CDS1735468 348 - 0.525862
ydhH conserved hypothetical proteinchromosome CDS1720207 1110 - 0.545946
yeaA methionine sulfoxide reductase Bchromosome CDS1863730 414 - 0.485507
yeaZ predicted peptidasechromosome CDS1892286 696 - 0.556035
yedF conserved hypothetical proteinchromosome CDS2011616 234 + 0.482906
yeeD conserved hypothetical proteinchromosome CDS2086363 228 - 0.504386
yegD predicted chaperonechromosome CDS2149811 1353 + 0.560976
yegQ predicted peptidasechromosome CDS2167805 1362 + 0.541116
yegU predicted hydrolasechromosome CDS2183429 1005 + 0.556219
yfcF hypothetical proteinchromosome CDS2425287 645 - 0.516279
yfcG predicted glutathione S-transferasechromosome CDS2426067 648 + 0.513889
yfjH hypothetical proteinchromosome CDS2756300 957 - 0.367816
ygcF conserved hypothetical proteinchromosome CDS2903403 672 - 0.516369
yggG predicted peptidasechromosome CDS3080569 759 + 0.515152
yggX protein that protects iron-sulfur proteins against oxidative damagechromosome CDS3102749 276 + 0.474638
yghU predicted S-transferasechromosome CDS3137383 867 + 0.534025
ygjD predicted peptidasechromosome CDS3208186 1014 - 0.576923
yhbU predicted peptidase, collagenase-likechromosome CDS3301340 996 + 0.568273
yhbV predicted proteasechromosome CDS3302344 879 + 0.559727
yhfA conserved hypothetical proteinchromosome CDS4154598 405 + 0.516049
yhhP conserved hypothetical protein required for cell growthchromosome CDS4031419 246 + 0.536585
yibF predicted glutathione S-transferasechromosome CDS3878460 609 + 0.527094
yifB predicted bifunctional protein, enzyme and transcriptional regulatorchromosome CDS3686682 1551 + 0.508059
yjjW predicted pyruvate formate lyase activating enzymechromosome CDS4619360 864 - 0.563657
yliJ predicted glutathione S-transferasechromosome CDS880276 627 - 0.519936
yncG hypothetical proteinchromosome CDS1527961 618 + 0.47411
yqjG predicted S-transferasechromosome CDS3249680 987 + 0.511651