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2024-05-04 12:25:45

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Xanthomonas campestris pv. vesicatoria, 85-10

Number of genes found: 182

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Xanthomonas campestris pv. vesicatoria, 85-10
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XCV3034 putative OsmC-like proteinchromosome CDS3453958 435 - 0.691954
NA XCV3731 Maleylacetoacetate isomerasechromosome CDS4312937 663 - 0.684766
NA XCV2918 extracellular proteasechromosome CDS3319380 1089 + 0.644628
NA XCV2429 thioredoxin-like proteinchromosome CDS2756332 600 + 0.658333
NA XCV3836 putative membrane proteinchromosome CDS4420951 600 + 0.623333
NA XCV0779 putative disulfide oxidoreductasechromosome CDS891707 651 - 0.652842
NA XCV3197 putative membrane proteinchromosome CDS3635474 693 - 0.676768
NA XCV4400 conserved hypothetical proteinchromosome CDS5074832 702 - 0.67094
NA XCV2307 putative thiol disulfide interchange proteinchromosome CDS2639893 837 - 0.612903
NA XCVd0145 putative cytosine-specific DNA methyltransferasepXCV183 CDS152000 1506 - 0.614874
NA XCV3013 putative cysteine protease precursorchromosome CDS3426424 813 + 0.639606
NA XCV1170 putative peroxiredoxinchromosome CDS1308895 378 - 0.632275
NA XCV1410 hypothetical proteinchromosome CDS1591313 186 - 0.655914
NA XCV2315 putative thiol:disulfide interchange proteinchromosome CDS2647616 645 - 0.603101
NA XCV0845 putative protease precursorchromosome CDS964784 1761 + 0.672345
NA XCV0113 putative protein-S isoprenylcysteine O-methyltransferasechromosome CDS130289 648 - 0.675926
NA XCV2946 putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin typechromosome CDS3351528 972 + 0.668724
NA XCV1411 heat shock proteinchromosome CDS1591688 1377 - 0.668119
NA XCV1268 putative integral membrane protease subunit; Band 7 familychromosome CDS1425221 870 - 0.631034
NA XCVd0099 putative Zeta toxin of the postsegregational killing systempXCV183 CDS109947 1188 - 0.619529
NA XCVd0045 putative periplasmic thiol:disulfide interchange proteinpXCV183 CDS51069 789 + 0.575412
NA XCV1316 putative Hsp90-family heat shock proteinchromosome CDS1476467 1971 + 0.66413
NA XCV0969 putative thioredoxinchromosome CDS1099400 612 + 0.69281
NA XCV2530 putative C-type cytochrome biogenesis proteinchromosome CDS2852504 1014 + 0.701183
NA XCV3172 conserved hypothetical proteinchromosome CDS3603797 702 - 0.675214
NA XCV3043 putative xanthine dehydrogenase accessory factor XdhCchromosome CDS3465018 996 - 0.680723
NA XCV1327 putative thioredoxinchromosome CDS1491397 447 - 0.655481
NA XCV0501 DnaJ-related chaperonechromosome CDS566866 408 + 0.693627
NA XCV2258 conserved hypothetical proteinchromosome CDS2589407 1500 + 0.667333
NA XCV3996 putative disulphide-isomerase precursorchromosome CDS4586352 1581 + 0.670462
NA XCV0480 putative thioredoxinchromosome CDS545266 591 + 0.675127
NA XCV0567 putative C-type cytochrome biogenesis proteinchromosome CDS634575 2319 - 0.709358
NA XCV1592 glutathione peroxidasechromosome CDS1797810 558 + 0.598566
NA XCV2364 putative secreted proteinchromosome CDS2693574 447 - 0.677852
NA XCV2898 metallopeptidasechromosome CDS3296430 2142 + 0.644258
NA XCV1172 low molecular weight heat shock proteinchromosome CDS1309540 477 + 0.622642
NA XCV0961 extracellular protease precursorchromosome CDS1092266 1698 + 0.683157
NA XCV2826 glutaredoxin-related proteinchromosome CDS3216665 321 - 0.619938
NA XCV2366 putative membrane proteinchromosome CDS2694859 786 - 0.69084
NA XCV4279 putative secreted proteinchromosome CDS4913291 591 + 0.661591
NA XCV2899 metallopeptidasechromosome CDS3298699 2355 + 0.624204
NA XCV2519 glutamine cyclotransferasechromosome CDS2843374 771 + 0.636835
NA XCV1033 peptidyl prolyl cis-trans isomerase, cyclophilin typechromosome CDS1160673 495 + 0.654545
NA XCV3060 OsmC-like proteinchromosome CDS3485236 435 - 0.634483
NA XCV2753 conserved hypothetical proteinchromosome CDS3133405 276 + 0.612319
NA XCV1716 Subtilase family serine proteasechromosome CDS1935110 819 - 0.660562
NA XCV4158 putative thioredoxinchromosome CDS4756100 390 - 0.6
NA XCV3027 metallopeptidase precursorchromosome CDS3446349 2103 - 0.634332
NA XCV1056 conserved hypothetical proteinchromosome CDS1185701 351 + 0.632479
NA XCV3185 HSP33 family chaperonechromosome CDS3618298 891 + 0.679012
NA XCVd0075 conserved hypothetical proteinpXCV183 CDS83244 2199 + 0.692133
NA XCV3998 putative cytochrome oxidase assembly proteinchromosome CDS4589067 1164 - 0.67268
NA XCV1412 peptidylprolyl isomerase (C-terminal fragment)chromosome CDS1593217 150 - 0.693333
NA XCV4047 putative competence related proteinchromosome CDS4647581 1521 + 0.698882
NA XCV0637 putative glutathione transferasechromosome CDS718440 975 + 0.627692
NA XCV0778 putative thiol:disulfide interchange proteinchromosome CDS890800 816 - 0.664216
NA XCV2993 extracellular serine proteasechromosome CDS3402421 1839 + 0.619902
NA XCV1413 peptidylprolyl isomerase (N-terminal fragment)chromosome CDS1593363 321 - 0.666667
NA XCV3238 glycoprotease family proteinchromosome CDS3694763 720 - 0.698611
NA XCV0647 putative thioredoxin reductasechromosome CDS731708 900 + 0.666667
NA XCV2313 putative thioredoxinchromosome CDS2646404 321 - 0.623053
NA XCV1626 peptidyl-prolyl cis-trans isomerasechromosome CDS1838848 699 + 0.646638
NA XCV2454 putative membrane proteinchromosome CDS2784636 330 - 0.572727
NA XCV4017 putative secreted proteinchromosome CDS4614684 678 + 0.678466
NA XCV3460 putative membrane proteinchromosome CDS3962697 507 + 0.668639
NA XCV2940 thioredoxinchromosome CDS3343453 858 + 0.671329
NA XCV3834 metallopeptidase precursorchromosome CDS4417151 2106 + 0.651947
NA XCV3735 conserved hypothetical proteinchromosome CDS4316950 453 + 0.580574
NA XCV2900 metallopeptidase precursorchromosome CDS3301238 2016 + 0.670635
NA XCV2385 hypothetical proteinchromosome CDS2713288 687 - 0.622999
NA XCV2308 putative thiol:disulfide interchange proteinchromosome CDS2640729 1791 - 0.648241
NA XCV0959 extracellular protease precursorchromosome CDS1088522 1734 + 0.67474
NA XCV3671 extracellular serine proteasechromosome CDS4234215 1884 - 0.667197
NA XCV4057 conserved hypothetical proteinchromosome CDS4656969 1125 + 0.641778
NA XCV3236 putative ADP-ribosylglycohydrolase (fragment)chromosome CDS3693582 495 - 0.713131
NA XCV0186 putative secreted proteinchromosome CDS222002 816 - 0.70098
NA XCV3237 putative ADP-ribosylglycohydrolase (fragment)chromosome CDS3694407 360 - 0.661111
NA XCV0080 putative thioredoxinchromosome CDS92935 330 + 0.636364
NA XCV3269 putative radical activating enzymechromosome CDS3736424 684 - 0.644737
NA XCV3327 glutathione S-transferasechromosome CDS3806221 708 + 0.611582
NA XCV1208 putative thioredoxin reductasechromosome CDS1353343 1710 + 0.683626
NA XCV0583 putative secreted protease; subtilase familychromosome CDS663717 1875 + 0.672533
NA XCV3669 extracellular serine proteasechromosome CDS4224496 1884 - 0.678344
NA XCV0636 putative secreted proteinchromosome CDS717486 792 + 0.613636
NA XCV1074 putative glutaredoxinchromosome CDS1206680 342 + 0.646199
NA XCVd0074 putative sigma-54-dependent transcriptional regulatorpXCV183 CDS82142 1092 + 0.679487
NA XCV0006 putative peptidase precursorchromosome CDS8504 768 + 0.639323
NA XCV0960 extracellular protease precursorchromosome CDS1090514 1410 + 0.683688
NA XCV1788 putative AhpC/TSA family peroxiredoxinchromosome CDS2010711 483 - 0.627329
NA XCV3944 hypothetical proteinchromosome CDS4528823 561 - 0.650624
NA XCV4436 putative secreted proteinchromosome CDS5110807 333 + 0.591592
NA XCV4012 putative molecular chaperonechromosome CDS4610007 1134 + 0.693122
NA XCV1759 putative L-isoaspartate O-methyltransferasechromosome CDS1981130 678 + 0.69469
aat XCV2052 Leucyltransferasechromosome CDS2335304 753 - 0.656043
ahpC XCV0943 Alkyl hydroperoxide reductase subunit Cchromosome CDS1071568 564 - 0.611702
ahpF XCV0942 Alkyl hydroperoxide reductase subunit Fchromosome CDS1069789 1593 - 0.64909
aspH XCV0397 peptide-aspartate beta-dioxygenasechromosome CDS450292 906 - 0.634658
ate XCV1273 arginine-tRNA-protein transferasechromosome CDS1430784 915 - 0.674317
btuE XCV4457 glutathione peroxidasechromosome CDS5139348 552 - 0.65942
cbpA XCV1173 curved DNA binding proteinchromosome CDS1310430 900 + 0.677778
ccmA XCV2522 heme ABC transporter ATP-binding protein CcmAchromosome CDS2846555 645 + 0.683721
ccmB XCV2523 ABC transporter heme permease CcmBchromosome CDS2847196 696 + 0.672414
ccmC1 XCV1715 ABC transporter heme permease CcmC (c-type cytochrome biogenesis protein CcmC)chromosome CDS1934341 759 - 0.642951
ccmC2 XCV2524 ABC transporter heme permease CcmC (c-type cytochrome biogenesis protein CcmC)chromosome CDS2847986 753 + 0.646746
ccmE1 XCV1713 C-type cytochrome biogenesis protein CcmEchromosome CDS1933671 471 - 0.624204
ccmE2 XCV2526 C-type cytochrome biogenesis protein CcmEchromosome CDS2848902 471 + 0.647558
ccmF1 XCV1712 C-type cytochrome biogenesis membrane protein CcmFchromosome CDS1931619 1989 - 0.660634
ccmF2 XCV2527 C-type cytochrome biogenesis membrane protein CcmFchromosome CDS2849544 1938 + 0.677503
ccmG1 XCV1711 thiol:disulfide interchange protein (c-type cytochrome biogenesis protein CcmG)chromosome CDS1931080 543 - 0.655617
ccmG2 XCV2528 thiol:disulfide interchange protein (c-type cytochrome biogenesis protein CcmG)chromosome CDS2851474 603 + 0.6534
ccmH1 XCV1710 C-type cytochrome biogenesis protein CcmHchromosome CDS1930586 432 - 0.650463
ccmH2 XCV2529 C-type cytochrome biogenesis protein CcmHchromosome CDS2852073 432 + 0.680556
clpA XCV2049 ATP-dependent Clp protease subunitchromosome CDS2332448 2283 + 0.633377
clpB XCV4236 ClpB proteinchromosome CDS4863335 2763 - 0.629026
clpB1 XCV2127 ATP-dependent Clp protease subunitchromosome CDS2438174 2739 + 0.645126
clpB2 XCV3324 ATP-dependent Clp protease subunitchromosome CDS3802293 2586 - 0.645398
clpP XCV1081 ATP-dependent Clp proteasechromosome CDS1213748 627 + 0.626794
clpX XCV1082 ATP-dependent Clp protease ATP binding subunitchromosome CDS1214500 1287 + 0.607615
ctaB XCV3997 cytochrome c oxidase assembly factorchromosome CDS4588168 897 - 0.636566
ctaG XCV4003 cytochrome c oxidase assembly proteinchromosome CDS4592853 597 - 0.649916
cydC XCV2533 ABC transporter permease and ATP-binding proteinchromosome CDS2855859 1686 - 0.688019
cydD XCV2534 ABC transporter permease and ATP-binding proteinchromosome CDS2857541 1713 - 0.682428
cysU XCV1048 ABC transporter sulfate permeasechromosome CDS1174304 861 + 0.665505
dnaJ XCV1565 DnaJ proteinchromosome CDS1764813 1128 + 0.664894
dnaK XCV1564 DnaK proteinchromosome CDS1762727 1926 + 0.636033
dsbB XCV1026 protein-disulfide reductase (glutathione)chromosome CDS1150116 519 + 0.628131
dsbC XCVd0137 thiol:disulfide interchange proteinpXCV183 CDS144018 753 + 0.646746
dsbC XCV3675 protein disulfide isomerase precursorchromosome CDS4244409 798 - 0.669173
dsbG XCV2306 thiol:disulfide interchange proteinchromosome CDS2639117 774 - 0.607235
fkpA XCV2419 FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS2744085 444 - 0.657658
fkpA XCV1593 FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS1798453 972 + 0.633745
flgA XCV2035 flagellar basal body P-ring biosynthesis proteinchromosome CDS2317088 759 + 0.677207
flgJ XCV2025 muramidase (flagellum-specific)chromosome CDS2307318 1179 - 0.665819
fliJ XCV1994 flagellar biosynthesis chaperone FliJchromosome CDS2274191 456 - 0.666667
fliS XCV2020 flagellin-specific chaperone FliSchromosome CDS2300549 414 - 0.640097
ftsH XCV1765 cell division protein FtsH (ATP-dependent zinc metallopeptidase)chromosome CDS1984855 1947 + 0.63585
gcp XCV3990 O-sialoglycoprotein endopeptidasechromosome CDS4579402 1062 - 0.700565
glnD XCV1486 [protein-PII] uridylyltransferasechromosome CDS1670246 2610 + 0.673946
glnE XCV0579 glutamate-ammonia-ligase adenylyltransferasechromosome CDS656595 2868 + 0.685844
gpo XCV1514 glutathione peroxidase-like proteinchromosome CDS1708716 486 + 0.627572
groEL XCV0571 60 kDa chaperoninchromosome CDS640327 1641 + 0.644119
groES XCV0570 10kDa chaperoninchromosome CDS639897 288 + 0.628472
grpE XCV1563 heat shock protein GrpEchromosome CDS1762067 519 + 0.67052
gst XCV2637 putative glutathione transferasechromosome CDS2972764 645 + 0.683721
gst1 XCV0931 glutathione transferasechromosome CDS1060027 642 + 0.679128
gst2 XCV1035 glutathione transferasechromosome CDS1162356 615 - 0.609756
gst3 XCV1348 glutathione transferasechromosome CDS1513305 657 + 0.683409
gst4 XCV1518 glutathione transferasechromosome CDS1714265 636 + 0.676101
gst5 XCV1532 glutathione transferasechromosome CDS1726559 639 + 0.646322
gst6 XCV2591 glutathione transferasechromosome CDS2920584 699 - 0.639485
gst7 XCV4137 putative glutathione transferasechromosome CDS4734897 690 - 0.637681
gst8 XCV4464 putative glutathione transferasechromosome CDS5145126 621 + 0.645733
hflC XCV1176 putative integral membrane protease subunit HflCchromosome CDS1314020 864 + 0.633102
hflK XCV1175 putative integral membrane protease subunit HflKchromosome CDS1312893 1128 + 0.672872
hslU XCV0693 ATP-dependent HslUV protease ATP-binding subunitHslUchromosome CDS786298 1368 + 0.633041
hslV XCV0692 ATP-dependent HslUV protease peptidase subunit HslVchromosome CDS785636 552 + 0.628623
htpG XCV2711 heat shock protein Gchromosome CDS3069821 1905 + 0.619947
htpX XCV2596 heat shock induced protease HtpXchromosome CDS2926326 879 - 0.648464
htrA XCV4074 Protease DO precursorchromosome CDS4670388 1437 + 0.652749
kscP XCV2734 Kumamolisin-like proteasechromosome CDS3109910 1572 + 0.658397
lon XCV1083 endopeptidase Lachromosome CDS1215931 2472 + 0.634709
msrB XCV3812 peptide methionine sulfoxide reductasechromosome CDS4397025 465 + 0.683871
mucD XCV1372 periplasmic serine protease MucDchromosome CDS1551676 1578 + 0.682509
ohr XCV0290 organic hydroperoxide resistance proteinchromosome CDS335792 429 + 0.666667
pcm XCV3590 protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS4123169 657 + 0.665145
pilD XCV3355 type II secretory pathway prepilin signal peptidasechromosome CDS3842523 864 + 0.641204
pms XCV0937 protein-methionine-S-oxide reductasechromosome CDS1064806 651 + 0.6298
ppiD XCV1085 peptidylprolyl isomerasechromosome CDS1219528 1971 + 0.648402
radA XCV1312 DNA repair proteinchromosome CDS1470595 1392 + 0.670977
slyD XCV2906 FKBP-type peptidyl-prolyl cis-trans isomerase SlyDchromosome CDS3309112 480 - 0.63125
smpB XCV1556 SsrA-binding protein SmpBchromosome CDS1756183 504 - 0.634921
sppA XCV3938 protease IVchromosome CDS4519167 1902 - 0.662986
sspA XCV2631 Stringent starvation protein Achromosome CDS2966313 636 - 0.613208
sufB XCV3079 ABC transporter-associated protein involved in Fe-S cluster assemblychromosome CDS3500649 1458 + 0.613855
sufC XCV3080 ABC transporter ATPase involved in Fe-S cluster assemblychromosome CDS3502262 765 + 0.631373
sufD XCV3081 ABC transporter-associated protein involved in Fe-S cluster assemblychromosome CDS3503026 1263 + 0.675376
surA XCV0902 peptidylprolyl isomerase precursorchromosome CDS1030187 1392 - 0.655891
tig XCV1080 ribosome-associated trigger factor (ATP-independent chaperone / peptidyl-prolyl-cis-trans-isomerase)chromosome CDS1212363 1293 + 0.655839
trxA XCV3955 thioredoxinchromosome CDS4539262 342 + 0.631579
trxB1 XCV2055 thioredoxin-disulfide reductasechromosome CDS2338678 969 - 0.659443
trxB2 XCV2311 thioredoxin reductasechromosome CDS2644801 960 - 0.666667
xopF2 XCV2942 Xanthomonas outer protein F2chromosome CDS3345432 2004 - 0.647206