Gene list
Applied filters:
COG category: Posttranslational modification, protein turnover, chaperones
Organism: Escherichia coli CFT073, CFT073
Number of genes found: 153
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli CFT073, CFT073 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
aat | Leucyl/phenylalanyl-tRNA--protein transferase | chromosome | CDS | 980857 | 705 | - | 0.53617 | |
ahpC | Alkyl hydroperoxide reductase C22 protein | chromosome | CDS | 680944 | 564 | + | 0.496454 | |
ahpF | Alkyl hydroperoxide reductase subunit F | chromosome | CDS | 681648 | 1596 | + | 0.522556 | |
bcp | Bacterioferritin comigratory protein | chromosome | CDS | 2871215 | 471 | + | 0.490446 | |
btuE | Vitamin B12 transport periplasmic protein btuE | chromosome | CDS | 1949526 | 552 | - | 0.48913 | |
c0348 | Hypothetical protein | chromosome | CDS | 323695 | 243 | + | 0.432099 | |
c0909 | Putative pyruvate formate-lyase 3 activating enzyme | chromosome | CDS | 883507 | 927 | - | 0.531823 | |
c1091 | Putative protease La homolog | chromosome | CDS | 1060314 | 1761 | - | 0.515616 | |
c1209 | Hypothetical protein | chromosome | CDS | 1166202 | 396 | + | 0.477273 | |
c1426 | Antitermination protein Q homolog of cryptic prophage | chromosome | CDS | 1340628 | 822 | + | 0.493917 | |
c1448 | Putative capsid assembly protein of prophage | chromosome | CDS | 1352906 | 1506 | + | 0.602922 | |
c1572 | Putative capsid assembly protein of prophage | chromosome | CDS | 1429149 | 1506 | + | 0.60093 | |
c1879 | Hypothetical protein | chromosome | CDS | 1714907 | 177 | + | 0.468927 | |
c1880 | Putative conserved protein | chromosome | CDS | 1715196 | 330 | + | 0.433333 | |
c3170 | Putative capsid protein of prophage | chromosome | CDS | 3040953 | 1434 | - | 0.609484 | |
c3186 | Antitermination protein Q homolog from lambdoid prophage Qin | chromosome | CDS | 3053277 | 783 | - | 0.480204 | |
c3392 | ClpB protein | chromosome | CDS | 3229545 | 2637 | + | 0.603337 | |
c3517 | Hypothetical protein | chromosome | CDS | 3373532 | 735 | + | 0.469388 | |
c3786 | Putative disulfide isomerase | chromosome | CDS | 3620671 | 669 | + | 0.446936 | |
c3787 | Putative disulfide isomerase | chromosome | CDS | 3621354 | 672 | + | 0.483631 | |
c4538 | Putative pyruvate formate-lyase 3 activating enzyme | chromosome | CDS | 4318098 | 918 | + | 0.465142 | |
c4688 | Hypothetical protein | chromosome | CDS | 4450708 | 330 | - | 0.490909 | |
cbpA | Curved DNA-binding protein | chromosome | CDS | 1097799 | 921 | - | 0.533116 | |
ccmA | Heme exporter protein A | chromosome | CDS | 2584529 | 624 | - | 0.55609 | |
ccmB | Heme exporter protein B | chromosome | CDS | 2583870 | 663 | - | 0.564103 | |
ccmC | Heme exporter protein C | chromosome | CDS | 2583091 | 762 | - | 0.548556 | |
ccmE | Cytochrome c-type biogenesis protein ccmE | chromosome | CDS | 2582409 | 480 | - | 0.539583 | |
ccmF | Cytochrome c-type biogenesis protein ccmF | chromosome | CDS | 2580469 | 1944 | - | 0.567901 | |
ccmH | Cytochrome c-type biogenesis protein ccmH precursor | chromosome | CDS | 2578866 | 1053 | - | 0.54226 | |
clpA | ATP-dependent clp protease ATP-binding subunit clpA | chromosome | CDS | 977378 | 2292 | + | 0.529668 | |
clpB | ClpB protein | chromosome | CDS | 2994301 | 2586 | - | 0.511988 | |
clpP | ATP-dependent Clp protease proteolytic subunit | chromosome | CDS | 530604 | 624 | + | 0.501603 | |
clpX | ATP-dependent Clp protease ATP-binding subunit clpX | chromosome | CDS | 531353 | 1275 | + | 0.516863 | |
cydC | Transport ATP-binding protein cydC | chromosome | CDS | 981603 | 1722 | - | 0.537747 | |
cydD | Transport ATP-binding protein cydD | chromosome | CDS | 983325 | 1767 | - | 0.535371 | |
cyoE | Protoheme IX farnesyltransferase | chromosome | CDS | 520743 | 891 | - | 0.533109 | |
cysU | Sulfate transport system permease protein cysT | chromosome | CDS | 2821614 | 834 | - | 0.565947 | |
degQ | Protease degQ precursor | chromosome | CDS | 3804182 | 1410 | + | 0.516312 | |
degS | Protease degS precursor | chromosome | CDS | 3805681 | 1068 | + | 0.530899 | |
dnaJ | Chaperone protein dnaJ | chromosome | CDS | 14951 | 1131 | + | 0.548187 | |
dnaK | Chaperone protein dnaK | chromosome | CDS | 12946 | 1917 | + | 0.510694 | |
dsbA | c4804 | Thiol:disulfide interchange protein dsbA precursor | chromosome | CDS | 4568909 | 627 | + | 0.480064 |
dsbB | Disulfide bond formation protein B | chromosome | CDS | 1469815 | 537 | - | 0.52514 | |
dsbC | Thiol:disulfide interchange protein dsbC precursor | chromosome | CDS | 3335085 | 711 | - | 0.482419 | |
dsbD | c5218 | Thiol:disulfide interchange protein dsbD precursor | chromosome | CDS | 4972379 | 1698 | - | 0.53828 |
dsbE | Thiol:disulfide interchange protein dsbE | chromosome | CDS | 2579915 | 558 | - | 0.550179 | |
dsbG | Thiol:disulfide interchange protein dsbG precursor | chromosome | CDS | 679826 | 807 | - | 0.460967 | |
fdhE | c4841 | Protein fdhE | chromosome | CDS | 4603811 | 930 | - | 0.547312 |
fklB | c5306 | FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 5045893 | 780 | + | 0.532051 |
fkpA | FKBP-type peptidyl-prolyl cis-trans isomerase fkpA precursor | chromosome | CDS | 3907995 | 813 | - | 0.484625 | |
flgA | Flagella basal body P-ring formation protein flgA precursor | chromosome | CDS | 1273707 | 660 | - | 0.536364 | |
flgJ | Peptidoglycan hydrolase flgJ | chromosome | CDS | 1280842 | 972 | + | 0.539095 | |
flgN | Flagella synthesis protein flgN | chromosome | CDS | 1272917 | 417 | - | 0.482014 | |
fliJ | Flagellar fliJ protein | chromosome | CDS | 2169714 | 444 | + | 0.522523 | |
fliS | Flagellar protein fliS | chromosome | CDS | 2154981 | 411 | + | 0.479319 | |
glnD | [Protein-PII] uridylyltransferase | chromosome | CDS | 196276 | 2673 | - | 0.537972 | |
glnE | Glutamate-ammonia-ligase adenylyltransferase | chromosome | CDS | 3635654 | 2952 | - | 0.553862 | |
grpE | GrpE protein | chromosome | CDS | 3012701 | 594 | - | 0.506734 | |
grxA | Glutaredoxin 1 | chromosome | CDS | 944871 | 273 | - | 0.465201 | |
grxB | Glutaredoxin 2 | chromosome | CDS | 1266907 | 648 | - | 0.489198 | |
grxC | Glutaredoxin 3 | chromosome | CDS | 4218377 | 252 | - | 0.5 | |
gst | Glutathione S-transferase | chromosome | CDS | 1874906 | 606 | + | 0.504951 | |
hflC | c5259 | HflC protein | chromosome | CDS | 5011460 | 1005 | + | 0.523383 |
hflK | c5258 | HflK protein | chromosome | CDS | 5010198 | 1260 | + | 0.561905 |
hlyC | Hemolysin C | chromosome | CDS | 3418210 | 675 | + | 0.348148 | |
hofD | Type 4 prepilin-like proteins leader peptide processing enzyme | chromosome | CDS | 3896922 | 678 | + | 0.504425 | |
hscA | Chaperone protein hscA | chromosome | CDS | 2925266 | 1905 | - | 0.575853 | |
hslJ | Heat shock protein hslJ | chromosome | CDS | 1659061 | 435 | - | 0.478161 | |
hslU | c4884 | ATP-dependent hsl protease ATP-binding subunit hslU | chromosome | CDS | 4640110 | 1332 | - | 0.521021 |
hslV | c4885 | ATP-dependent protease hslV | chromosome | CDS | 4641451 | 531 | - | 0.52919 |
htpG | Chaperone protein htpG | chromosome | CDS | 569770 | 1875 | + | 0.526933 | |
htpX | Probable protease htpX | chromosome | CDS | 2063367 | 882 | - | 0.531746 | |
htrA | Protease do precursor | chromosome | CDS | 191223 | 1425 | + | 0.540351 | |
hyaE | Hydrogenase-1 operon protein hyaE | chromosome | CDS | 1080143 | 399 | + | 0.551378 | |
hybG | Hydrogenase-2 operon protein hybG | chromosome | CDS | 3561590 | 249 | - | 0.522088 | |
hypB | Hydrogenase isoenzymes nickel incorporation protein hypB | chromosome | CDS | 3131693 | 873 | + | 0.556701 | |
hypC | Hydrogenase isoenzymes formation protein hypC | chromosome | CDS | 3132556 | 273 | + | 0.542125 | |
hypD | Hydrogenase isoenzymes formation protein hypD | chromosome | CDS | 3132828 | 1122 | + | 0.549911 | |
hypE | Hydrogenase isoenzymes formation protein hypE | chromosome | CDS | 3133946 | 1011 | + | 0.570722 | |
hypF | Hydrogenase maturation protein hypF | chromosome | CDS | 3117740 | 2325 | - | 0.579355 | |
ibpA | 16 kDa heat shock protein A | chromosome | CDS | 4368745 | 420 | - | 0.469048 | |
ibpB | 16 kDa heat shock protein B | chromosome | CDS | 4368205 | 435 | - | 0.485057 | |
lon | ATP-dependent protease La | chromosome | CDS | 532770 | 2400 | + | 0.5225 | |
mchD | MchD protein | chromosome | CDS | 1178897 | 453 | + | 0.423841 | |
mopA | c5227 | 60 kDa chaperonin | chromosome | CDS | 4980059 | 1647 | + | 0.530662 |
mopB | c5226 | 10 kDa chaperonin | chromosome | CDS | 4979722 | 294 | + | 0.486395 |
msrA | c5317 | Peptide methionine sulfoxide reductase msrA | chromosome | CDS | 5057435 | 705 | - | 0.540426 |
nrdG | c5336 | Anaerobic ribonucleoside-triphosphate reductase activating protein | chromosome | CDS | 5076974 | 465 | - | 0.516129 |
nrdH | Glutaredoxin-like protein nrdH | chromosome | CDS | 3081260 | 246 | + | 0.536585 | |
nrfE | c5070 | Cytochrome c-type biogenesis protein nrfE | chromosome | CDS | 4844772 | 1683 | + | 0.572192 |
nrfF | c5071 | Formate-dependent nitrite reductase complex nrfF subunit precursor | chromosome | CDS | 4846447 | 384 | + | 0.513021 |
nrfG | c5072 | Formate-dependent nitrite reductase complex nrfG subunit | chromosome | CDS | 4846827 | 597 | + | 0.522613 |
osmC | Osmotically inducible protein C | chromosome | CDS | 1749589 | 432 | + | 0.49537 | |
pcm | Protein-L-isoaspartate O-methyltransferase | chromosome | CDS | 3152102 | 627 | - | 0.53429 | |
pflA | Pyruvate formate-lyase 1 activating enzyme | chromosome | CDS | 1001299 | 768 | - | 0.501302 | |
pflC | c4911 | Pyruvate formate-lyase 2 activating enzyme | chromosome | CDS | 4673271 | 879 | + | 0.547213 |
ppiA | Peptidyl-prolyl cis-trans isomerase A precursor | chromosome | CDS | 3923113 | 573 | - | 0.514834 | |
ppiB | Peptidyl-prolyl cis-trans isomerase B | chromosome | CDS | 623001 | 495 | - | 0.476768 | |
ppiC | Peptidyl-prolyl cis-trans isomerase C | chromosome | CDS | 4460473 | 282 | - | 0.507092 | |
ptr | Protease III precursor | chromosome | CDS | 3263316 | 2889 | - | 0.507788 | |
rpsV | 30S ribosomal protein S22 | chromosome | CDS | 1748790 | 138 | - | 0.449275 | |
slpA | FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase | chromosome | CDS | 28071 | 450 | + | 0.544444 | |
slyD | FKBP-type peptidyl-prolyl cis-trans isomerase slyD | chromosome | CDS | 3909295 | 591 | - | 0.551607 | |
smpB | SsrA-binding protein | chromosome | CDS | 3017482 | 483 | + | 0.515528 | |
sms | DNA repair protein radA | chromosome | CDS | 5215245 | 1431 | + | 0.583508 | |
sohB | Possible protease sohB | chromosome | CDS | 1572932 | 1050 | + | 0.50381 | |
sppA | Protease IV | chromosome | CDS | 2006066 | 1857 | + | 0.518578 | |
sspA | Stringent starvation protein A | chromosome | CDS | 3800262 | 639 | - | 0.536776 | |
surA | Survival protein surA precursor | chromosome | CDS | 56608 | 1287 | - | 0.537685 | |
tig | Trigger factor | chromosome | CDS | 529060 | 1299 | + | 0.513472 | |
tpx | Thiol peroxidase | chromosome | CDS | 1630926 | 507 | - | 0.516765 | |
trxA | Thioredoxin 1 | chromosome | CDS | 4465820 | 435 | + | 0.485057 | |
trxB | Thioredoxin reductase | chromosome | CDS | 985214 | 1086 | - | 0.515654 | |
trxC | Thioredoxin 2 | chromosome | CDS | 2981427 | 420 | + | 0.497619 | |
yabH | DnaJ-like protein djlA | chromosome | CDS | 60463 | 909 | + | 0.517052 | |
ybaU | Peptidyl-prolyl cis-trans isomerase D | chromosome | CDS | 535842 | 1872 | + | 0.521368 | |
ybbJ | Hypothetical protein ybbJ | chromosome | CDS | 590361 | 459 | - | 0.583878 | |
ybbK | Hypothetical protein ybbK | chromosome | CDS | 590816 | 918 | - | 0.527233 | |
ybbN | Hypothetical protein ybbN | chromosome | CDS | 593386 | 891 | - | 0.546577 | |
ybeW | Chaperone protein hscC | chromosome | CDS | 1999554 | 1701 | - | 0.451499 | |
ycaL | Putative metalloprotease ycaL | chromosome | CDS | 1011216 | 774 | + | 0.489664 | |
yciQ | Hypothetical protein yciQ | chromosome | CDS | 1568347 | 1893 | + | 0.472266 | |
ydcP | Putative protease ydcP precursor | chromosome | CDS | 1697478 | 2004 | + | 0.506487 | |
ydhD | Protein ydhD | chromosome | CDS | 1889895 | 348 | - | 0.525862 | |
ydhH | Hypothetical protein ydhH | chromosome | CDS | 1879022 | 1110 | - | 0.554955 | |
yeaA | Peptide methionine sulfoxide reductase msrB | chromosome | CDS | 2019246 | 444 | - | 0.47973 | |
yeaZ | Hypothetical protease yeaZ | chromosome | CDS | 2042244 | 696 | - | 0.558908 | |
yedF | Hypothetical protein yedF | chromosome | CDS | 2159157 | 234 | + | 0.482906 | |
yegD | Hypothetical chaperone protein yegD | chromosome | CDS | 2434939 | 1416 | + | 0.556497 | |
yegQ | Putative protease yegQ | chromosome | CDS | 2457424 | 1362 | + | 0.543319 | |
yegU | Hypothetical protein yegU | chromosome | CDS | 2470767 | 1005 | + | 0.545274 | |
yfcF | Hypothetical GST-like protein yfcF | chromosome | CDS | 2702344 | 645 | - | 0.51938 | |
yfcG | Hypothetical GST-like protein yccG | chromosome | CDS | 2703124 | 648 | + | 0.512346 | |
yfgJ | Hypothetical protein yfgJ | chromosome | CDS | 2904232 | 216 | - | 0.453704 | |
yfhE | Chaperone protein hscB | chromosome | CDS | 2927133 | 516 | - | 0.523256 | |
ygcF | Hypothetical protein ygcF | chromosome | CDS | 3177637 | 672 | - | 0.508929 | |
yggG | Putative metalloprotease yggG | chromosome | CDS | 3376764 | 978 | + | 0.517382 | |
yggX | Protein yggX | chromosome | CDS | 3399952 | 276 | + | 0.471014 | |
yghU | Hypothetical GST-like protein yghU | chromosome | CDS | 3560534 | 915 | + | 0.536612 | |
ygjD | Probable O-sialoglycoprotein endopeptidase | chromosome | CDS | 3650124 | 1014 | - | 0.564103 | |
yhbU | Putative protease yhbU precursor | chromosome | CDS | 3735090 | 1023 | + | 0.56305 | |
yhbV | Hypothetical protein yhbV | chromosome | CDS | 3736103 | 897 | + | 0.558528 | |
yhfA | Hypothetical protein yhfA | chromosome | CDS | 3916802 | 405 | - | 0.51358 | |
yhgI | Protein yhgI | chromosome | CDS | 3972233 | 576 | + | 0.527778 | |
yhhP | SirA protein | chromosome | CDS | 4047406 | 246 | - | 0.50813 | |
yibF | Hypothetical GST-like protein yibF | chromosome | CDS | 4197047 | 609 | - | 0.527094 | |
yifB | Hypothetical protein yifB | chromosome | CDS | 4449486 | 1086 | - | 0.514733 | |
yjjW | Hypothetical protein yjjW | chromosome | CDS | 5203398 | 864 | - | 0.55787 | |
yliJ | Hypothetical GST-like protein yliJ | chromosome | CDS | 900748 | 633 | - | 0.519747 | |
ynhC | SufD protein | chromosome | CDS | 1916660 | 1272 | - | 0.533805 | |
ynhD | Probable ATP-dependent transporter sufC | chromosome | CDS | 1917906 | 747 | - | 0.499331 | |
ynhE | SufB protein | chromosome | CDS | 1918662 | 1527 | - | 0.516045 | |
yrfI | Heat shock protein 33 | chromosome | CDS | 3955821 | 885 | + | 0.527684 |