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2024-05-06 18:22:01

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Yersinia pestis KIM, KIM

Number of genes found: 138

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA unknownpMT1 CDS50211 786 - 0.519084
aat leucyl, phenylalanyl-tRNA-protein transferasechromosome CDS3109812 735 + 0.491156
bcp bacterioferritin comigratory proteinchromosome CDS1573250 474 - 0.443038
btuE vitamin B12-binding periplasmic protein of vitamin B12 ABC transporterchromosome CDS2108578 555 + 0.445045
ccmA ATP binding protein of heme exporter Achromosome CDS1735042 657 + 0.494673
ccmB heme exporter protein Bchromosome CDS1735641 687 + 0.519651
ccmC heme exporter protein Cchromosome CDS1736390 738 + 0.501355
ccmE possible subunit of a heme lyasechromosome CDS1737423 495 + 0.511111
ccmF cytochrome c-type biogenesis proteinchromosome CDS1737914 1971 + 0.524099
clpA ATP-binding component of serine proteasechromosome CDS3112053 2283 - 0.494963
clpB heat shock proteinchromosome CDS293817 2604 - 0.53149
clpB putative proteasechromosome CDS3705087 2649 - 0.585126
clpB heat shock proteinchromosome CDS2981840 2640 - 0.592424
clpB heat shock proteinchromosome CDS1021277 2595 + 0.478613
clpP ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5chromosome CDS1156547 624 + 0.461538
clpX ATP-dependent specificity component of clpP serine protease, chaperonechromosome CDS1157376 1272 + 0.481132
cydC ATP-binding component of cytochrome-related transportchromosome CDS3107893 1725 + 0.515942
cydD ATP-binding component of cytochrome-related transportchromosome CDS3106106 1785 + 0.505882
cyoE protoheme IX farnesyltransferase (haeme O biosynthesis)chromosome CDS1145303 909 - 0.465347
cysU inner membrane permease T of sulfate/thiosulfate ABC transporterchromosome CDS1625825 834 + 0.53717
degQ serine endoproteasechromosome CDS148564 1392 + 0.484914
degS proteasechromosome CDS150756 1089 + 0.481175
dnaJ chaperone with DnaK; heat shock proteinchromosome CDS4118103 1140 - 0.499123
dnaK chaperone Hsp70chromosome CDS4119354 1911 - 0.480377
dsbA protein disulfide isomerase Ichromosome CDS4236383 624 - 0.421474
dsbB dsbB proteinchromosome CDS2409820 579 + 0.455959
dsbC protein disulfide isomerase IIchromosome CDS3606320 717 - 0.456067
dsbD thiol:disulfide interchange proteinchromosome CDS680946 1788 - 0.522371
dsbE disulfide oxidoreductasechromosome CDS1739881 567 + 0.497355
fdhE formate dehydrogenase formation proteinchromosome CDS4519865 930 - 0.495699
fklB FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase (rotamase)chromosome CDS733296 621 + 0.520129
fkpA FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)chromosome CDS4433330 840 + 0.458333
flgA putative flagella basal body P-ring formation proteinchromosome CDS2772500 765 + 0.517647
flgJ flagellar biosynthesis proteinchromosome CDS2765093 945 - 0.540741
flgN flagellar biosynthesis proteinchromosome CDS2773733 444 + 0.488739
fliJ flagellar fliJ proteinchromosome CDS2744765 447 + 0.478747
fliS repressor of class 3a and 3b operons (RflA activity)chromosome CDS2731874 399 + 0.466165
fliT repressor of class 3a and 3b operons (RflA activity)chromosome CDS2732232 414 + 0.425121
glnD protein PIIchromosome CDS3450658 2739 + 0.49215
glnE adenylylating enzyme for glutamine synthetasechromosome CDS3908423 2883 - 0.527229
grpE heat shock proteinchromosome CDS3383536 579 - 0.47323
grxA glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductasechromosome CDS3153362 264 + 0.439394
grxC glutaredoxin 3chromosome CDS83726 249 - 0.514056
gst glutathionine S-transferasechromosome CDS2168209 609 - 0.456486
hflB integral membrane peptidase, cell division proteinchromosome CDS764620 1944 + 0.46965
hflC putative protease specific for phage lambda cII repressorchromosome CDS716498 1005 + 0.502488
hflC putative ftsH proteinase activity modulatorchromosome CDS3142789 927 - 0.399137
hflK putative protease specific for phage lambda cII repressorchromosome CDS715235 1260 + 0.503175
hscA heat shock proteinchromosome CDS1483166 1935 + 0.547804
hslJ heat shock protein HslJchromosome CDS2205442 453 - 0.437086
hslU heat shock protein, ATPase subunitchromosome CDS312872 1332 - 0.487988
hslV heat shock protein, proteasome-related peptidase subunitchromosome CDS314274 525 - 0.487619
htpG chaperone Hsp90, heat shock protein C 62.5chromosome CDS1198004 1875 + 0.463467
htpX heat shock protein, integral membrane proteinchromosome CDS2062129 882 + 0.470522
htrA periplasmic serine protease Dochromosome CDS902759 1446 + 0.498617
ibpA heat shock proteinchromosome CDS4553462 414 - 0.425121
ibpB heat shock proteinchromosome CDS4552717 507 - 0.481262
lfgA putative flagellar proteinchromosome CDS3840808 918 + 0.486928
lon DNA-binding ATP-dependent protease La; heat shock K-proteinchromosome CDS1158788 2409 + 0.479867
mopA GroEL proteinchromosome CDS687731 1647 + 0.504554
mopB GroES proteinchromosome CDS687391 294 + 0.489796
msrA peptide methionine sulfoxide reductasechromosome CDS740810 639 - 0.532081
nrdG anaerobic ribonucleotide reductase activating proteinchromosome CDS815071 435 - 0.51954
nrdH glutaredoxin-like proteinchromosome CDS1375806 237 - 0.447257
pcm L-isoaspartate protein carboxylmethyltransferase type IIchromosome CDS931543 627 + 0.496013
pflA pyruvate formate lyase activating enzyme 1chromosome CDS3091400 798 + 0.463659
ppiA peptidyl-prolyl cis-trans isomerase Achromosome CDS4409170 600 + 0.453333
ppiB peptidyl-prolyl cis-trans isomerase Bchromosome CDS1245056 495 - 0.466667
ppiC peptidyl-prolyl cis-trans isomerase Cchromosome CDS396283 297 - 0.447811
ptr protease IIIchromosome CDS3480752 2889 - 0.467636
slpA probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerasechromosome CDS4110017 534 - 0.47191
slyD FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)chromosome CDS4432028 588 + 0.52551
smpB small protein Bchromosome CDS3388332 495 + 0.458586
sms probable ATP-dependent proteasechromosome CDS4155353 1383 - 0.544469
sohB putative proteasechromosome CDS2265449 1047 + 0.483286
sppA protease IV, a signal peptide peptidasechromosome CDS2387165 1851 + 0.480281
sspA regulator of transcription; stringent starvation protein Achromosome CDS144392 642 - 0.487539
surA survival proteinchromosome CDS4092544 1305 + 0.485824
tig trigger factor proteinchromosome CDS1154781 1305 + 0.47433
tpx thiol peroxidasechromosome CDS2190007 576 - 0.473958
trxA thioredoxin 1chromosome CDS401861 327 + 0.461774
trxB thioredoxin reductasechromosome CDS3104703 963 + 0.515057
trxC putative thioredoxin-like proteinchromosome CDS1035512 438 - 0.502283
ureE urease accessory proteinchromosome CDS1389215 705 + 0.49078
ureF urease accessory proteinchromosome CDS1389941 687 + 0.490539
ureG urease accessory proteinchromosome CDS1390754 663 + 0.484163
y0112 putative transferasechromosome CDS122056 936 + 0.49359
y0227 hypotheticalchromosome CDS239254 1176 + 0.460884
y0229 hypothetical proteinchromosome CDS242133 855 + 0.495906
y0319 peroxiredoxin family proteinchromosome CDS346619 732 - 0.463115
y0334 putative 2-component regulatorchromosome CDS368467 1545 - 0.532686
y0354 glutamine cyclotransferasechromosome CDS395253 792 - 0.340909
y0409 hypothetical proteinchromosome CDS457677 396 + 0.467172
y0535 hypothetical proteinchromosome CDS601882 270 + 0.548148
y0705 hypothetical proteinchromosome CDS792071 900 - 0.506667
y0706 putative collagenasechromosome CDS792961 996 - 0.5251
y0816 hypothetical proteinchromosome CDS915174 672 + 0.491071
y0944 putative adhesin system proteinchromosome CDS1063849 1854 + 0.452535
y0988 putative peroxidasechromosome CDS1119184 603 - 0.472637
y1031 putative protease maturation proteinchromosome CDS1161987 1887 + 0.45469
y1095 hypothetical proteinchromosome CDS1235010 450 - 0.502222
y1096 putative proteasechromosome CDS1235462 915 - 0.469945
y1097 putative thioredoxin-like proteinchromosome CDS1236571 870 - 0.508046
y1158 putative ABC transporter, ATP-binding proteinchromosome CDS1307011 1791 + 0.467337
y1280 putative pyrrolidone-carboxylate peptidasechromosome CDS1425707 648 + 0.498457
y1338 hypothetical proteinchromosome CDS1482399 525 + 0.506667
y1379 hypothetical proteinchromosome CDS1527407 1395 - 0.496057
y1394 putative heat shock proteinchromosome CDS1549071 1353 - 0.543976
y1538 putative Clp ATPasechromosome CDS1702814 2751 + 0.475463
y1574 putative cytochrome c-type biogenesis proteinchromosome CDS1740444 513 + 0.465887
y1575 putative cytochrome c-type biogenesis proteinchromosome CDS1740956 1227 + 0.495518
y1935 hypothetical proteinchromosome CDS2132888 1512 + 0.494048
y1936 putative ATP-binding component of a transport systemchromosome CDS2134558 774 + 0.459948
y1937 hypothetical proteinchromosome CDS2135306 1326 + 0.497738
y1953 hypothetical proteinchromosome CDS2155983 366 + 0.459016
y1963 hypothetical proteinchromosome CDS2163408 1155 + 0.51342
y2164 hypothetical proteinchromosome CDS2391287 471 - 0.443737
y2238 hypothetical proteinchromosome CDS2466377 753 - 0.544489
y2363 putative thioredoxin-family proteinchromosome CDS2606790 531 - 0.468927
y2739 putative ATP-dependent proteasechromosome CDS3021964 1773 + 0.51269
y2871 putative transferasechromosome CDS3168739 723 + 0.481328
y3189 hypotheticalchromosome CDS3511342 636 + 0.47956
y3195 putative type IV prepilin peptidasechromosome CDS3515572 915 - 0.357377
y3311 hypothetical proteinchromosome CDS3646857 780 + 0.489744
y3340 hypothetical proteinchromosome CDS3679946 273 + 0.410256
y3447 hypotheticalchromosome CDS3834214 294 - 0.503401
y3482 hypotheticalchromosome CDS3865823 423 + 0.385343
y3534 putative O-sialoglycoprotein endopeptidasechromosome CDS3917772 1029 - 0.516035
y3548 hypotheticalchromosome CDS3929900 717 + 0.492329
y3613 hypothetical proteinchromosome CDS4005512 180 + 0.527778
y3669 putative ATP-dependent proteasechromosome CDS4076150 2604 - 0.534562
y3679 putative DNA binding proteinchromosome CDS4089116 834 - 0.5
y3784 putative peptidasechromosome CDS4204696 1047 + 0.526266
y3791 hypotheticalchromosome CDS4211044 723 - 0.304288
y3903 hypothetical proteinchromosome CDS4361988 576 - 0.46875
y3909 hypothetical proteinchromosome CDS4364349 279 + 0.437276
y3919 hypothetical proteinchromosome CDS4375795 882 - 0.492063
y3957 hypothetical proteinchromosome CDS4417198 408 + 0.490196