Gene list
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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Deinococcus radiodurans, R1
Number of genes found: 108
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| Deinococcus radiodurans, R1 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| DR0057 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 52370 | 255 | - | 0.694118 | |
| DR0071 | peptidyl-prolyl cis-trans isomerse, putative, PpiC family | SubName: Full=Peptidyl-prolyl cis-trans isomerse, putative, PpiC family; | chromosome 1 | CDS | 66759 | 2034 | - | 0.6706 | |
| DR0112 | glutamine cyclotransferase | SubName: Full=Glutamine cyclotransferase; | chromosome 1 | CDS | 111006 | 885 | - | 0.690395 | |
| DR0128 | grpE protein | RecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; | chromosome 1 | CDS | 125525 | 666 | - | 0.615616 | |
| DR0129 | dnaK protein | RecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; | chromosome 1 | CDS | 126272 | 1887 | - | 0.63593 | |
| DR0189 | thiol:disulfide interchange protein | SubName: Full=Thiol:disulfide interchange protein; | chromosome 1 | CDS | 192257 | 558 | - | 0.724014 | |
| DR0190 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 192846 | 1209 | - | 0.716294 | |
| DR0237 | peptidyl-prolyl cis-trans isomerase, cyclophilin-type | SubName: Full=Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; | chromosome 1 | CDS | 234954 | 582 | + | 0.64433 | |
| DR0327 | periplasmic serine protease, HtrA/DegQ/DegS family | SubName: Full=Periplasmic serine protease, HtrA/DegQ/DegS family; | chromosome 1 | CDS | 321592 | 1095 | - | 0.69863 | |
| DR0344 | cytochrome c-type biogenesis protein CcmH | SubName: Full=Cytochrome c-type biogenesis protein CcmH; | chromosome 1 | CDS | 341411 | 600 | - | 0.688333 | |
| DR0345 | cytochrome c biogenesis protein, thiol:disulfide interchange protein | SubName: Full=Cytochrome c biogenesis protein, thiol:disulfide interchange protein; | chromosome 1 | CDS | 342007 | 567 | - | 0.684303 | |
| DR0346 | cytochrome c-type biogenesis protein CcmF | SubName: Full=Cytochrome c-type biogenesis protein CcmF; | chromosome 1 | CDS | 342570 | 1995 | - | 0.684211 | |
| DR0347 | cytochrome c-type biogenesis protein CcmE | RecName: Full=Cytochrome c-type biogenesis protein CcmE; AltName: Full=Cytochrome c maturation protein E; AltName: Full=Heme chaperone CcmE; | chromosome 1 | CDS | 344724 | 507 | - | 0.65286 | |
| DR0348 | cytochrome c-type biogenesis protein, heme exporter protein C | SubName: Full=Cytochrome c-type biogenesis protein, heme exporter protein C; | chromosome 1 | CDS | 345357 | 711 | - | 0.642757 | |
| DR0349 | ATP-dependent protease LA | RecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; | chromosome 1 | CDS | 346377 | 2466 | + | 0.647607 | |
| DR0407 | cytochrome c-type biogenesis protein, heme exporter protein B | SubName: Full=Cytochrome c-type biogenesis protein, heme exporter protein B; | chromosome 1 | CDS | 411386 | 666 | + | 0.65015 | |
| DR0412 | pyridine nucleotide-disulphide oxidoreductase, class II | SubName: Full=Pyridine nucleotide-disulphide oxidoreductase, class II; | chromosome 1 | CDS | 414190 | 975 | + | 0.711795 | |
| DR0445 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 442103 | 576 | + | 0.666667 | |
| DR0482 | B-cell receptor associated protein-related protein | SubName: Full=B-cell receptor associated protein-related protein; | chromosome 1 | CDS | 485078 | 987 | - | 0.668693 | |
| DR0490 | pyrrolidone carboxyl peptidase | RecName: Full=Pyrrolidone-carboxylate peptidase; EC=3.4.19.3; AltName: Full=5-oxoprolyl-peptidase; AltName: Full=Pyroglutamyl-peptidase I; Short=PGP-I; Short=Pyrase; | chromosome 1 | CDS | 492064 | 657 | - | 0.712329 | |
| DR0524 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 525552 | 399 | + | 0.749373 | |
| DR0560 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 566403 | 1131 | - | 0.693192 | |
| DR0583 | cell division protein FtsH | RecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; | chromosome 1 | CDS | 595289 | 1857 | - | 0.661282 | |
| DR0588 | ATP-dependent Clp protease, ATP-binding subunit ClpA | SubName: Full=ATP-dependent Clp protease, ATP-binding subunit ClpA; | chromosome 1 | CDS | 600865 | 2226 | + | 0.692273 | |
| DR0606 | chaperonin | RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; | chromosome 1 | CDS | 617795 | 363 | + | 0.595041 | |
| DR0607 | groEL protein | RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; | chromosome 1 | CDS | 618232 | 1647 | + | 0.64663 | |
| DR0647 | cell division cycle protein 48-related protein | SubName: Full=Cell division cycle protein 48-related protein; | chromosome 1 | CDS | 658500 | 1383 | + | 0.70282 | |
| DR0745 | periplasmic serine protease, HtrA/DegQ/DegS family | SubName: Full=Periplasmic serine protease, HtrA/DegQ/DegS family; | chromosome 1 | CDS | 761680 | 1101 | + | 0.722979 | |
| DR0753 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 769557 | 789 | + | 0.65019 | |
| DR0754 | conserved hypothetical protein | RecName: Full=Probable disulfide formation protein; AltName: Full=Disulfide oxidoreductase; AltName: Full=Thiol-disulfide oxidoreductase; | chromosome 1 | CDS | 770356 | 462 | + | 0.660173 | |
| DR0756 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 771536 | 573 | - | 0.722513 | |
| DR0812 | serine protease, subtilase family | SubName: Full=Serine protease, subtilase family; | chromosome 1 | CDS | 824459 | 1776 | - | 0.693131 | |
| DR0844 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 856017 | 2073 | + | 0.684515 | |
| DR0846 | bacterioferritin comigratory protein | SubName: Full=Bacterioferritin comigratory protein; | chromosome 1 | CDS | 859216 | 528 | - | 0.659091 | |
| DR0944 | thioredoxin | SubName: Full=Thioredoxin; | chromosome 1 | CDS | 959113 | 426 | + | 0.63615 | |
| DR0948 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 961738 | 453 | - | 0.684327 | |
| DR0985 | conserved hypothetical protein | RecName: Full=33 kDa chaperonin; AltName: Full=Heat shock protein 33 homolog; Short=HSP33; | chromosome 1 | CDS | 1001875 | 960 | - | 0.691667 | |
| DR1020 | cell division protein FtsH | RecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; | chromosome 1 | CDS | 1033441 | 1968 | - | 0.660061 | |
| DR1046 | ATP-dependent Clp protease, ATP-binding subunit ClpB | RecName: Full=Chaperone protein ClpB; | chromosome 1 | CDS | 1057871 | 2628 | + | 0.637367 | |
| DR1047 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1060525 | 483 | + | 0.610766 | |
| DR1063 | peptidyl-prolyl cis-trans isomerase C | SubName: Full=Peptidyl-prolyl cis-trans isomerase C; | chromosome 1 | CDS | 1074789 | 1035 | + | 0.691787 | |
| DR1105 | DNA repair protein | RecName: Full=DNA repair protein radA; | chromosome 1 | CDS | 1112934 | 1512 | + | 0.685847 | |
| DR1114 | heat shock protein, HSP20 family | SubName: Full=Heat shock protein, HSP20 family; | chromosome 1 | CDS | 1120142 | 549 | + | 0.641166 | |
| DR1117 | ATP-dependent Clp protease, ATP-binding subunit ClpC | SubName: Full=ATP-dependent Clp protease, ATP-binding subunit ClpC; | chromosome 1 | CDS | 1123384 | 2244 | - | 0.667112 | |
| DR1177 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1187564 | 423 | + | 0.65721 | |
| DR1208 | bacterioferritin comigratory protein | SubName: Full=Bacterioferritin comigratory protein; | chromosome 1 | CDS | 1218015 | 492 | + | 0.711382 | |
| DR1209 | bacterioferritin comigratory protein | SubName: Full=Bacterioferritin comigratory protein; | chromosome 1 | CDS | 1218503 | 480 | + | 0.68125 | |
| DR1300 | cytochrome c-type biogenesis protein, putative | SubName: Full=Cytochrome c-type biogenesis protein, putative; | chromosome 1 | CDS | 1306651 | 693 | - | 0.683983 | |
| DR1378 | MsrA-related protein | RecName: Full=Peptide methionine sulfoxide reductase MsrB; EC=1.8.4.12; AltName: Full=Peptide-methionine (R)-S-oxide reductase; | chromosome 1 | CDS | 1385625 | 474 | + | 0.654008 | |
| DR1406 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1407247 | 474 | - | 0.706751 | |
| DR1424 | dnaJ protein | RecName: Full=Chaperone protein DnaJ; | chromosome 1 | CDS | 1425448 | 1263 | - | 0.673001 | |
| DR1459 | serine protease, subtilase family | SubName: Full=Serine protease, subtilase family; | chromosome 1 | CDS | 1461255 | 1884 | - | 0.691083 | |
| DR1468 | small protein B | RecName: Full=SsrA-binding protein; | chromosome 1 | CDS | 1478190 | 483 | + | 0.637681 | |
| DR1538 | osmotically inducible protein C | SubName: Full=Osmotically inducible protein C; | chromosome 1 | CDS | 1555635 | 519 | + | 0.637765 | |
| DR1599 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1621524 | 1413 | + | 0.692144 | |
| DR1656 | Mg(2+) chelatase family protein | SubName: Full=Mg(2+) chelatase family protein; | chromosome 1 | CDS | 1680022 | 1560 | + | 0.710897 | |
| DR1691 | heat shock protein-related protein | SubName: Full=Heat shock protein-related protein; | chromosome 1 | CDS | 1713208 | 501 | + | 0.712575 | |
| DR1713 | leu/phe-tRNA-protein transferase | RecName: Full=Leucyl/phenylalanyl-tRNA--protein transferase; EC=2.3.2.6; AltName: Full=L/F-transferase; AltName: Full=Leucyltransferase; AltName: Full=Phenyalanyltransferase; | chromosome 1 | CDS | 1737756 | 633 | - | 0.688784 | |
| DR1756 | periplasmic serine protease Do, putative | SubName: Full=Periplasmic serine protease Do, putative; | chromosome 1 | CDS | 1783757 | 1326 | - | 0.684766 | |
| DR1839 | peptidyl-prolyl cis-trans isomerase, FKBP-type | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome 1 | CDS | 1867095 | 459 | + | 0.620915 | |
| DR1849 | peptide methionine sulfoxide reductase | RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase; | chromosome 1 | CDS | 1873784 | 621 | + | 0.661836 | |
| DR1857 | organic hydroperoxide resistance protein | SubName: Full=Organic hydroperoxide resistance protein; | chromosome 1 | CDS | 1881637 | 420 | - | 0.702381 | |
| DR1893 | peptidyl-prolyl cis-trans isomerase, cyclophilin-type | SubName: Full=Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; | chromosome 1 | CDS | 1912601 | 1053 | - | 0.665717 | |
| DR1937 | serine protease, subtilase family | SubName: Full=Serine protease, subtilase family; | chromosome 1 | CDS | 1957013 | 1203 | - | 0.723192 | |
| DR1940 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1962313 | 1212 | + | 0.702145 | |
| DR1948 | trigger factor | RecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; | chromosome 1 | CDS | 1969694 | 1398 | - | 0.664521 | |
| DR1958 | ADP-ribosylglycohydrolase, putative | SubName: Full=ADP-ribosylglycohydrolase, putative; | chromosome 1 | CDS | 1978216 | 1002 | + | 0.724551 | |
| DR1972 | ATP-dependent Clp protease, proteolytic subunit ClpP | RecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; | chromosome 1 | CDS | 1992204 | 615 | + | 0.603252 | |
| DR1973 | ATP-dependent Clp protease, ATP-binding subunit ClpX | RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; | chromosome 1 | CDS | 1992815 | 1212 | + | 0.633663 | |
| DR1974 | ATP-dependent protease LA | RecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; | chromosome 1 | CDS | 1994173 | 2442 | + | 0.665438 | |
| DR1982 | thioredoxin reductase | RecName: Full=Thioredoxin reductase; EC=1.8.1.9; | chromosome 1 | CDS | 2004309 | 978 | - | 0.645194 | |
| DR2019 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 2036686 | 1041 | + | 0.68684 | |
| DR2056 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 2071052 | 444 | + | 0.675676 | |
| DR2065 | prepilin peptidase, type IV | SubName: Full=Prepilin peptidase, type IV; | chromosome 1 | CDS | 2079839 | 1167 | + | 0.67952 | |
| DR2085 | glutaredoxin, putative | SubName: Full=Glutaredoxin, putative; | chromosome 1 | CDS | 2098437 | 246 | - | 0.654472 | |
| DR2096 | endopeptidase IV-related protein | SubName: Full=Endopeptidase IV-related protein; | chromosome 1 | CDS | 2106819 | 1671 | + | 0.687612 | |
| DR2101 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 2111655 | 1353 | - | 0.654102 | |
| DR2106 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 2114448 | 1407 | - | 0.616915 | |
| DR2107 | ABC transporter, ATP-binding protein, Ycf16 family | SubName: Full=ABC transporter, ATP-binding protein, Ycf16 family; | chromosome 1 | CDS | 2115949 | 759 | - | 0.615283 | |
| DR2130 | protease, putative | SubName: Full=Protease, putative; | chromosome 1 | CDS | 2132660 | 2523 | - | 0.679746 | |
| DR2142 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 2144362 | 480 | - | 0.697917 | |
| DR2143 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 2144834 | 1035 | - | 0.648309 | |
| DR2242 | thiol-specific antioxidant protein, putative | SubName: Full=Thiol-specific antioxidant protein, putative; | chromosome 1 | CDS | 2236289 | 456 | - | 0.666667 | |
| DR2322 | serine protease, subtilase family, C-terminal fragment | SubName: Full=Serine protease, subtilase family, C-terminal; | chromosome 1 | CDS | 2320597 | 867 | - | 0.685121 | |
| DR2325 | serine protease, subtilase family, N-terminal fragment | SubName: Full=Serine protease, subtilase family, N-terminal; | chromosome 1 | CDS | 2323098 | 930 | - | 0.668817 | |
| DR2464 | peptidyl-prolyl cis-trans isomerase, FKBP-type | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome 1 | CDS | 2460100 | 477 | + | 0.641509 | |
| DR2542 | peptidyl-prolyl cis-trans isomerase, cyclophilin-type | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome 1 | CDS | 2543933 | 531 | - | 0.651601 | |
| DR2617 | cytochrome AA3-controlling protein CtaA, putative | SubName: Full=Cytochrome AA3-controlling protein CtaA, putative; | chromosome 1 | CDS | 2625850 | 1044 | + | 0.704981 | |
| DR2618 | cytochrome C oxidase assembly factor | RecName: Full=Protoheme IX farnesyltransferase; EC=2.5.1.-; AltName: Full=Heme B farnesyltransferase; AltName: Full=Heme O synthase; | chromosome 1 | CDS | 2626890 | 942 | + | 0.651805 | |
| DR2623 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 2633662 | 999 | - | 0.647648 | |
| DRA0064 | serine protease, subtilase family | SubName: Full=Serine protease, subtilase family; | chromosome 2 | CDS | 69403 | 1455 | - | 0.71134 | |
| DRA0072 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 76678 | 276 | - | 0.710145 | |
| DRA0129 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 127183 | 1032 | - | 0.732558 | |
| DRA0164 | thioredoxin 1 | SubName: Full=Thioredoxin 1; | chromosome 2 | CDS | 163921 | 429 | + | 0.682984 | |
| DRA0168 | molybdenum ABC transporter, permease protein, putative | SubName: Full=Molybdenum ABC transporter, permease protein, putative; | chromosome 2 | CDS | 170655 | 801 | - | 0.700375 | |
| DRA0179 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 2 | CDS | 184027 | 825 | + | 0.724849 | |
| DRA0283 | serine protease, subtilase family | RecName: Full=Probable subtilase-type serine protease DR_A0283; EC=3.4.21.-; Flags: Precursor; | chromosome 2 | CDS | 305413 | 2187 | + | 0.666209 | |
| DRA0290 | cell division protein FtsH | RecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; | chromosome 2 | CDS | 313191 | 1968 | + | 0.642785 | |
| DRA0311 | urease accessory protein UreD | RecName: Full=Urease accessory protein UreD; | chromosome 2 | CDS | 338800 | 837 | - | 0.726404 | |
| DRA0312 | urease accessory protein UreG | RecName: Full=Urease accessory protein UreG; | chromosome 2 | CDS | 339633 | 642 | - | 0.669782 | |
| DRA0313 | urease accessory protein UreF | RecName: Full=Urease accessory protein UreF; | chromosome 2 | CDS | 340295 | 642 | - | 0.744548 | |
| DRA0314 | urease accessory protein UreE | RecName: Full=Urease accessory protein UreE; | chromosome 2 | CDS | 340933 | 468 | - | 0.720085 | |
| DRA0315 | hydrogenase expression/formation HypB-related protein | SubName: Full=Hydrogenase expression/formation HypB-related protein; | chromosome 2 | CDS | 341397 | 660 | - | 0.684848 | |
| DRA0317 | urease accessory protein UreJ | SubName: Full=Urease accessory protein UreJ; | chromosome 2 | CDS | 342428 | 558 | - | 0.707885 | |
| DRA0341 | serine protease, subtilase family | SubName: Full=Serine protease, subtilase family; | chromosome 2 | CDS | 373491 | 1365 | + | 0.654945 | |
| DRB0069 | serine protease, subtilase family | SubName: Full=Serine protease, subtilase family; | MP1 | CDS | 85353 | 2235 | + | 0.540492 | |
| DRB0110 | thioredoxin-related protein | SubName: Full=Thioredoxin-related protein; | MP1 | CDS | 130047 | 264 | + | 0.640152 | |
| DRC0037 | nodulation protein-related protein | SubName: Full=Nodulation protein-related protein; | CP1 | CDS | 39258 | 2112 | + | 0.582386 | |
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