Gene list
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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Bacteroides fragilis NCTC 9343, ATCC 25285 = NCTC 9343
Number of genes found: 109
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| Bacteroides fragilis NCTC 9343, ATCC 25285 = NCTC 9343 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | BF2656 | putative thioredoxin | SubName: Full=Putative thioredoxin; | chromosome | CDS | 3091136 | 297 | - | 0.457912 |
| NA | BF3833 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4524684 | 282 | - | 0.301418 |
| NA | BF0994 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1244707 | 2139 | + | 0.434315 |
| NA | BF3399 | conserved hypothetical protein | RecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG synthase; EC=4.3.99.3; AltName: Full=Queuosine biosynthesis protein QueE; | chromosome | CDS | 4010443 | 546 | - | 0.424908 |
| NA | BF4128 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4855463 | 1152 | - | 0.392361 |
| NA | BF1927 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2247839 | 714 | + | 0.354342 |
| NA | BF1279 | putative thioredoxin | RecName: Full=Thioredoxin; | chromosome | CDS | 1532501 | 324 | + | 0.41358 |
| NA | BF0702 | putative transmembrane AAA-metalloprotease FtsH | RecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; | chromosome | CDS | 857918 | 1995 | - | 0.465664 |
| NA | BF3928 | putative peptidyl-prolyl cis-trans isomerase | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 4634595 | 840 | - | 0.4 |
| NA | BF2419 | putative proteinase | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2808915 | 861 | + | 0.542393 |
| NA | BF4209 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4972073 | 1317 | - | 0.35839 |
| NA | BF3888 | putative exported peptidyl-prolyl cis-trans isomerase | SubName: Full=Putative exported peptidyl-prolyl cis-trans isomerase; | chromosome | CDS | 4575948 | 1371 | - | 0.458789 |
| NA | BF0221 | putative ABC transporter membrane protein | SubName: Full=Putative ABC transporter membrane protein; | chromosome | CDS | 240692 | 1458 | + | 0.430727 |
| NA | BF3775 | putative exported serine protease, subtilase family | SubName: Full=Putative exported serine protease, subtilase family; | chromosome | CDS | 4458150 | 1356 | - | 0.518437 |
| NA | BF0362 | putative transmembrane protein | SubName: Full=Putative transmembrane protein; | chromosome | CDS | 438173 | 1242 | + | 0.462963 |
| NA | BF2363 | putative cytochrome C biogenesis-related protein | SubName: Full=Putative cytochrome C biogenesis-related protein; | chromosome | CDS | 2757393 | 786 | - | 0.442748 |
| NA | BF2022 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2365431 | 429 | - | 0.379953 |
| NA | BF3417 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4032671 | 387 | + | 0.307494 |
| NA | BF3485 | putative anaerobic ribonucleoside-triphosphate reductase activating protein | RecName: Full=Anaerobic ribonucleoside-triphosphate reductase-activating protein; EC=1.97.1.-; | chromosome | CDS | 4108178 | 459 | + | 0.490196 |
| NA | BF4281 | possible thiol-disulfide oxidoreductase | SubName: Full=Possible thiol-disulfide oxidoreductase; | chromosome | CDS | 5080396 | 1071 | + | 0.398693 |
| NA | BF2029 | putative ATP-binding protein | SubName: Full=Putative ATP-binding protein; | chromosome | CDS | 2373718 | 3072 | - | 0.403971 |
| NA | BF3015 | putative thioredoxin | SubName: Full=Putative thioredoxin; | chromosome | CDS | 3507306 | 297 | + | 0.414141 |
| NA | BF1779 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2064552 | 831 | + | 0.625752 |
| NA | BF3895 | putative cell division trigger factor | SubName: Full=Putative cell division trigger factor; | chromosome | CDS | 4585888 | 1356 | - | 0.438053 |
| NA | BF4208 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4970718 | 1302 | - | 0.340246 |
| NA | BF0363 | putative cytochrome c biogenesis protein | SubName: Full=Putative cytochrome c biogenesis protein; | chromosome | CDS | 439411 | 792 | + | 0.462121 |
| NA | BF3623 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 4278519 | 1422 | + | 0.469058 |
| NA | BF0223 | putative ABC transporter, ATP-binding protein | SubName: Full=Putative ABC transporter, ATP-binding protein; | chromosome | CDS | 242919 | 753 | + | 0.446215 |
| NA | BF2694 | putative exported thioredoxin | SubName: Full=Putative exported thioredoxin; | chromosome | CDS | 3133607 | 486 | + | 0.442387 |
| NA | BF3497 | putative glycoprotease family exported protein | SubName: Full=Putative glycoprotease family exported protein; | chromosome | CDS | 4119559 | 717 | - | 0.454672 |
| NA | BF0149 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 155702 | 561 | + | 0.440285 |
| NA | BF2286 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2679242 | 606 | - | 0.39604 |
| NA | BF3042 | putative lipoprotein | SubName: Full=Putative lipoprotein; | chromosome | CDS | 3538441 | 804 | - | 0.375622 |
| NA | BF3040 | putative SsrA-binding protein | RecName: Full=SsrA-binding protein; | chromosome | CDS | 3537405 | 453 | - | 0.417219 |
| NA | BF3142 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 3662914 | 1527 | + | 0.496398 |
| NA | BF3057 | putative thiol:disulfide oxidoreductase | SubName: Full=Putative thiol:disulfide oxidoreductase; | chromosome | CDS | 3557834 | 1086 | + | 0.480663 |
| NA | BF0045 | conserved hypothetical lipoprotein | SubName: Full=Conserved hypothetical lipoprotein; | chromosome | CDS | 49746 | 870 | + | 0.33908 |
| NA | BF3889 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 4577328 | 843 | - | 0.441281 |
| NA | BF1319 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1582590 | 753 | - | 0.411687 |
| NA | BF4351 | putative peptidase | SubName: Full=Putative peptidase; | chromosome | CDS | 5175930 | 1269 | - | 0.478329 |
| NA | BF1335 | putative peptidase | SubName: Full=Putative peptidase; | chromosome | CDS | 1597397 | 801 | - | 0.469413 |
| NA | BF0194 | putative heat-shock protein | SubName: Full=Putative heat-shock protein; | chromosome | CDS | 212717 | 1767 | + | 0.431805 |
| NA | BF2360 | putative thioredoxin peroxidase | SubName: Full=Putative thioredoxin peroxidase; | chromosome | CDS | 2754824 | 633 | + | 0.464455 |
| NA | BF3335 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3934770 | 1212 | - | 0.427393 |
| NA | BF1150 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1409067 | 573 | - | 0.390925 |
| NA | BF4196 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4958348 | 1251 | - | 0.338129 |
| NA | BF3207 | putative chaperone | SubName: Full=Putative chaperone; | chromosome | CDS | 3770531 | 942 | - | 0.475584 |
| NA | BF1092 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1346438 | 150 | + | 0.406667 |
| NA | BF2224 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2598696 | 1518 | + | 0.428854 |
| NA | BF3092 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 3603671 | 2343 | + | 0.506615 |
| NA | BF3308 | putative membrane attached hydrolase | SubName: Full=Putative membrane attached hydrolase; | chromosome | CDS | 3903206 | 1200 | - | 0.380833 |
| NA | BF0413 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 498026 | 294 | + | 0.387755 |
| NA | BF3033 | putative exported cytochrome C biogenesis-related protein | SubName: Full=Putative exported cytochrome C biogenesis-related protein; | chromosome | CDS | 3527613 | 2010 | - | 0.424378 |
| NA | BF2390 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2790104 | 510 | + | 0.405882 |
| NA | BF4056 | putative outer membrane protein | SubName: Full=Putative outer membrane protein; | chromosome | CDS | 4769105 | 3246 | + | 0.441466 |
| NA | BF3319 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 3914269 | 861 | - | 0.396051 |
| NA | BF3059 | hypothetical exported protein | SubName: Full=Hypothetical exported protein; | chromosome | CDS | 3559888 | 1632 | + | 0.482843 |
| NA | BF3211 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3777355 | 2214 | + | 0.47019 |
| NA | BF2460 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2860293 | 270 | + | 0.322222 |
| NA | BF4282 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 5081500 | 1539 | + | 0.45614 |
| NA | BF2761 | putative heat shock-related protease | SubName: Full=Putative heat shock-related protease; | chromosome | CDS | 3217136 | 1548 | - | 0.510982 |
| NA | BF1870 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2181911 | 984 | + | 0.502033 |
| NA | BF0549 | putative protease | SubName: Full=Putative protease; | chromosome | CDS | 652731 | 1827 | + | 0.515599 |
| NA | BF0355 | putative fkbp-type 22 kDa peptidyl-prolyl cis-trans isomerase | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 431517 | 552 | + | 0.402174 |
| NA | BF3016 | putative thioredoxin family protein | RecName: Full=Thioredoxin; | chromosome | CDS | 3507660 | 420 | + | 0.404762 |
| NA | BF2646 | putative heat-shock related protein | SubName: Full=Putative heat-shock related protein; | chromosome | CDS | 3078374 | 429 | + | 0.386946 |
| NA | BF4309 | putative isomerase | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 5115370 | 864 | + | 0.425926 |
| NA | BF0224 | putative ABC transporter protein | SubName: Full=Putative ABC transporter protein; | chromosome | CDS | 243668 | 1356 | + | 0.435103 |
| NA | BF2237 | putative thioredoxin | RecName: Full=Thioredoxin; | chromosome | CDS | 2613064 | 357 | - | 0.383754 |
| NA | BF4180 | putative pyruvate formate-lyase activating enzyme | SubName: Full=Putative pyruvate formate-lyase activating enzyme; EC=1.97.1.4; | chromosome | CDS | 4940130 | 786 | + | 0.409669 |
| NA | BF3558 | putative isomerase | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 4191648 | 591 | + | 0.436548 |
| NA | BF2364 | conserved hypothetical membrane protein | SubName: Full=Conserved hypothetical membrane protein; | chromosome | CDS | 2758162 | 888 | - | 0.402027 |
| NA | BF3141 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3661655 | 1122 | + | 0.431373 |
| NA | BF3890 | putative exported isomerase | SubName: Full=Putative exported isomerase; | chromosome | CDS | 4578227 | 1554 | - | 0.458172 |
| NA | BF3768 | putative exported thioredoxin | SubName: Full=Putative exported thioredoxin; | chromosome | CDS | 4450848 | 1902 | + | 0.466877 |
| NA | BF3656 | putative glutathione peroxidase | RecName: Full=Glutathione peroxidase; | chromosome | CDS | 4312195 | 495 | - | 0.424242 |
| NA | BF2739 | putative lipoprotein/thioderoxin | SubName: Full=Putative lipoprotein/thioderoxin; | chromosome | CDS | 3187573 | 1104 | + | 0.457428 |
| NA | BF0403 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 489797 | 888 | + | 0.413288 |
| NA | BF2075 | putative peptidyl-prolyl cis-trans isomerase | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 2428447 | 456 | + | 0.45614 |
| NA | BF3378 | putative peptide methionine sulfoxide reductase | SubName: Full=Putative peptide methionine sulfoxide reductase; | chromosome | CDS | 3989919 | 1086 | + | 0.411602 |
| NA | BF2512 | putative glycoprotease | RecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; | chromosome | CDS | 2920130 | 1020 | - | 0.416667 |
| NA | BF2023 | putative ATP-dependent protease | SubName: Full=Putative ATP-dependent protease; | chromosome | CDS | 2365875 | 2484 | - | 0.487923 |
| NA | BF1184 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1439220 | 792 | + | 0.40404 |
| ahpC | BF1210 | alkyl hydroperoxide reductase C subunit | SubName: Full=Alkyl hydroperoxide reductase C subunit; | chromosome | CDS | 1473793 | 567 | - | 0.483245 |
| ahpF | BF1209 | alkyl hydroperoxide reductase subunit F | SubName: Full=Alkyl hydroperoxide reductase subunit F; | chromosome | CDS | 1472142 | 1551 | - | 0.515796 |
| bcp | BF1181 | putative bacterioferritin comigratory protein | SubName: Full=Putative bacterioferritin comigratory protein; | chromosome | CDS | 1436028 | 447 | - | 0.407159 |
| clpB | BF1172 | putative heat shock ClpB protein | SubName: Full=Putative heat shock ClpB protein; | chromosome | CDS | 1427359 | 2589 | - | 0.428737 |
| clpB | BF2492 | negative regulator of genetic competence | SubName: Full=Negative regulator of genetic competence; | chromosome | CDS | 2896396 | 2535 | - | 0.451677 |
| clpP | BF3894 | putative ATP-dependent CLP protease proteolytic subunit | RecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; | chromosome | CDS | 4585088 | 624 | - | 0.467949 |
| clpX | BF3893 | putative ATP-dependent CLP protease ATP-binding subunit | RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; | chromosome | CDS | 4583838 | 1248 | - | 0.485577 |
| dnaJ | BF1818 | putative chaperone protein | RecName: Full=Chaperone protein DnaJ; | chromosome | CDS | 2124358 | 1185 | - | 0.473418 |
| dnaK1 | BF0623 | putative chaperone protein | SubName: Full=Putative chaperone protein; | chromosome | CDS | 759650 | 1590 | - | 0.411321 |
| dnaK2 | BF1189 | putative chaperone protein | RecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; | chromosome | CDS | 1445996 | 1920 | + | 0.444792 |
| fklB | BF4308 | putative FkbP-type 22 kDa peptidyl-prolyl cis-trans isomerase | RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; | chromosome | CDS | 5114765 | 585 | + | 0.451282 |
| groEL | BF3222 | 60 kDa chaperonin | RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; | chromosome | CDS | 3787952 | 1638 | - | 0.437118 |
| groES | BF3223 | 10 kDa chaperonin | RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; | chromosome | CDS | 3789632 | 273 | - | 0.410256 |
| grpE | BF1819 | putative GrpE protein (HSP70 cofactor) | RecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; | chromosome | CDS | 2125594 | 588 | - | 0.433673 |
| htpG | BF2491 | chaperone protein | RecName: Full=Chaperone protein HtpG; AltName: Full=Heat shock protein HtpG; AltName: Full=High temperature protein G; | chromosome | CDS | 2894220 | 2046 | - | 0.407625 |
| htpX | BF1952 | putative transmembrane protease HtpX homolog | RecName: Full=Protease HtpX homolog; EC=3.4.24.-; | chromosome | CDS | 2278024 | 969 | - | 0.429309 |
| lon | BF2393 | ATP-dependent protease | RecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; | chromosome | CDS | 2793008 | 2469 | - | 0.443499 |
| pdiA | BF1378 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1645958 | 597 | + | 0.460637 |
| pepO | BF3918 | putative endopeptidase | SubName: Full=Putative endopeptidase; | chromosome | CDS | 4615594 | 2034 | - | 0.457719 |
| pflA | BF1322 | putative pyruvate formate-lyase 1 activating enzyme | SubName: Full=Putative pyruvate formate-lyase 1 activating enzyme; EC=1.97.1.4; | chromosome | CDS | 1585626 | 726 | - | 0.444904 |
| radA | BF0555 | putative DNA repair protein | RecName: Full=DNA repair protein radA; | chromosome | CDS | 660845 | 1368 | - | 0.522661 |
| sppA | BF3272 | putative protease IV | SubName: Full=Putative protease IV; EC=3.4.21.-; | chromosome | CDS | 3858437 | 1779 | + | 0.435076 |
| tpx | BF2777 | putative thiol peroxidase | RecName: Full=Probable thiol peroxidase; EC=1.11.1.-; | chromosome | CDS | 3236634 | 501 | - | 0.48503 |
| trxA | BF0642 | putative thioredoxin | RecName: Full=Thioredoxin; | chromosome | CDS | 778479 | 315 | + | 0.387302 |
| trxB | BF0952 | putative thioredoxin reductase | RecName: Full=Thioredoxin reductase; EC=1.8.1.9; | chromosome | CDS | 1188719 | 948 | + | 0.46519 |
| ubb | BF3883 | putative ubiquitin | SubName: Full=Putative ubiquitin; | chromosome | CDS | 4570311 | 231 | + | 0.311688 |
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