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2024-04-28 21:40:34

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Bacteroides fragilis NCTC 9343, ATCC 25285 = NCTC 9343

Number of genes found: 109

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Bacteroides fragilis NCTC 9343, ATCC 25285 = NCTC 9343
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BF2656 putative thioredoxinchromosome CDS3091136 297 - 0.457912
NA BF0223 putative ABC transporter, ATP-binding proteinchromosome CDS242919 753 + 0.446215
NA BF3033 putative exported cytochrome C biogenesis-related proteinchromosome CDS3527613 2010 - 0.424378
NA BF4128 conserved hypothetical proteinchromosome CDS4855463 1152 - 0.392361
NA BF3015 putative thioredoxinchromosome CDS3507306 297 + 0.414141
NA BF3042 putative lipoproteinchromosome CDS3538441 804 - 0.375622
NA BF2237 putative thioredoxinchromosome CDS2613064 357 - 0.383754
NA BF0362 putative transmembrane proteinchromosome CDS438173 1242 + 0.462963
NA BF3928 putative peptidyl-prolyl cis-trans isomerasechromosome CDS4634595 840 - 0.4
NA BF1927 conserved hypothetical proteinchromosome CDS2247839 714 + 0.354342
NA BF3207 putative chaperonechromosome CDS3770531 942 - 0.475584
NA BF4281 possible thiol-disulfide oxidoreductasechromosome CDS5080396 1071 + 0.398693
NA BF3335 conserved hypothetical proteinchromosome CDS3934770 1212 - 0.427393
NA BF0403 conserved hypothetical proteinchromosome CDS489797 888 + 0.413288
NA BF2360 putative thioredoxin peroxidasechromosome CDS2754824 633 + 0.464455
NA BF4180 putative pyruvate formate-lyase activating enzymechromosome CDS4940130 786 + 0.409669
NA BF3485 putative anaerobic ribonucleoside-triphosphate reductase activating proteinchromosome CDS4108178 459 + 0.490196
NA BF1150 conserved hypothetical proteinchromosome CDS1409067 573 - 0.390925
NA BF3497 putative glycoprotease family exported proteinchromosome CDS4119559 717 - 0.454672
NA BF4351 putative peptidasechromosome CDS5175930 1269 - 0.478329
NA BF1335 putative peptidasechromosome CDS1597397 801 - 0.469413
NA BF3141 conserved hypothetical proteinchromosome CDS3661655 1122 + 0.431373
NA BF0413 hypothetical proteinchromosome CDS498026 294 + 0.387755
NA BF2761 putative heat shock-related proteasechromosome CDS3217136 1548 - 0.510982
NA BF3623 putative exported proteinchromosome CDS4278519 1422 + 0.469058
NA BF3833 hypothetical proteinchromosome CDS4524684 282 - 0.301418
NA BF2512 putative glycoproteasechromosome CDS2920130 1020 - 0.416667
NA BF2390 conserved hypothetical proteinchromosome CDS2790104 510 + 0.405882
NA BF4056 putative outer membrane proteinchromosome CDS4769105 3246 + 0.441466
NA BF3558 putative isomerasechromosome CDS4191648 591 + 0.436548
NA BF3057 putative thiol:disulfide oxidoreductasechromosome CDS3557834 1086 + 0.480663
NA BF1092 hypothetical proteinchromosome CDS1346438 150 + 0.406667
NA BF0224 putative ABC transporter proteinchromosome CDS243668 1356 + 0.435103
NA BF2739 putative lipoprotein/thioderoxinchromosome CDS3187573 1104 + 0.457428
NA BF3768 putative exported thioredoxinchromosome CDS4450848 1902 + 0.466877
NA BF1319 conserved hypothetical proteinchromosome CDS1582590 753 - 0.411687
NA BF1779 hypothetical proteinchromosome CDS2064552 831 + 0.625752
NA BF2075 putative peptidyl-prolyl cis-trans isomerasechromosome CDS2428447 456 + 0.45614
NA BF4309 putative isomerasechromosome CDS5115370 864 + 0.425926
NA BF3895 putative cell division trigger factorchromosome CDS4585888 1356 - 0.438053
NA BF3889 putative exported proteinchromosome CDS4577328 843 - 0.441281
NA BF2646 putative heat-shock related proteinchromosome CDS3078374 429 + 0.386946
NA BF1870 conserved hypothetical proteinchromosome CDS2181911 984 + 0.502033
NA BF0363 putative cytochrome c biogenesis proteinchromosome CDS439411 792 + 0.462121
NA BF3775 putative exported serine protease, subtilase familychromosome CDS4458150 1356 - 0.518437
NA BF3888 putative exported peptidyl-prolyl cis-trans isomerasechromosome CDS4575948 1371 - 0.458789
NA BF3142 putative exported proteinchromosome CDS3662914 1527 + 0.496398
NA BF0355 putative fkbp-type 22 kDa peptidyl-prolyl cis-trans isomerasechromosome CDS431517 552 + 0.402174
NA BF3211 conserved hypothetical proteinchromosome CDS3777355 2214 + 0.47019
NA BF4208 conserved hypothetical proteinchromosome CDS4970718 1302 - 0.340246
NA BF1279 putative thioredoxinchromosome CDS1532501 324 + 0.41358
NA BF4209 conserved hypothetical proteinchromosome CDS4972073 1317 - 0.35839
NA BF0994 conserved hypothetical proteinchromosome CDS1244707 2139 + 0.434315
NA BF3399 conserved hypothetical proteinchromosome CDS4010443 546 - 0.424908
NA BF3890 putative exported isomerasechromosome CDS4578227 1554 - 0.458172
NA BF4282 conserved hypothetical proteinchromosome CDS5081500 1539 + 0.45614
NA BF2286 hypothetical proteinchromosome CDS2679242 606 - 0.39604
NA BF3092 putative exported proteinchromosome CDS3603671 2343 + 0.506615
NA BF0149 putative exported proteinchromosome CDS155702 561 + 0.440285
NA BF3016 putative thioredoxin family proteinchromosome CDS3507660 420 + 0.404762
NA BF3378 putative peptide methionine sulfoxide reductasechromosome CDS3989919 1086 + 0.411602
NA BF3059 hypothetical exported proteinchromosome CDS3559888 1632 + 0.482843
NA BF3308 putative membrane attached hydrolasechromosome CDS3903206 1200 - 0.380833
NA BF3656 putative glutathione peroxidasechromosome CDS4312195 495 - 0.424242
NA BF3040 putative SsrA-binding proteinchromosome CDS3537405 453 - 0.417219
NA BF2363 putative cytochrome C biogenesis-related proteinchromosome CDS2757393 786 - 0.442748
NA BF2224 conserved hypothetical proteinchromosome CDS2598696 1518 + 0.428854
NA BF0221 putative ABC transporter membrane proteinchromosome CDS240692 1458 + 0.430727
NA BF3319 putative exported proteinchromosome CDS3914269 861 - 0.396051
NA BF0194 putative heat-shock proteinchromosome CDS212717 1767 + 0.431805
NA BF2364 conserved hypothetical membrane proteinchromosome CDS2758162 888 - 0.402027
NA BF1184 conserved hypothetical proteinchromosome CDS1439220 792 + 0.40404
NA BF2029 putative ATP-binding proteinchromosome CDS2373718 3072 - 0.403971
NA BF3417 hypothetical proteinchromosome CDS4032671 387 + 0.307494
NA BF2460 hypothetical proteinchromosome CDS2860293 270 + 0.322222
NA BF2419 putative proteinasechromosome CDS2808915 861 + 0.542393
NA BF0549 putative proteasechromosome CDS652731 1827 + 0.515599
NA BF2022 conserved hypothetical proteinchromosome CDS2365431 429 - 0.379953
NA BF2694 putative exported thioredoxinchromosome CDS3133607 486 + 0.442387
NA BF0702 putative transmembrane AAA-metalloprotease FtsHchromosome CDS857918 1995 - 0.465664
NA BF4196 hypothetical proteinchromosome CDS4958348 1251 - 0.338129
NA BF2023 putative ATP-dependent proteasechromosome CDS2365875 2484 - 0.487923
NA BF0045 conserved hypothetical lipoproteinchromosome CDS49746 870 + 0.33908
ahpC BF1210 alkyl hydroperoxide reductase C subunitchromosome CDS1473793 567 - 0.483245
ahpF BF1209 alkyl hydroperoxide reductase subunit Fchromosome CDS1472142 1551 - 0.515796
bcp BF1181 putative bacterioferritin comigratory proteinchromosome CDS1436028 447 - 0.407159
clpB BF2492 negative regulator of genetic competencechromosome CDS2896396 2535 - 0.451677
clpB BF1172 putative heat shock ClpB proteinchromosome CDS1427359 2589 - 0.428737
clpP BF3894 putative ATP-dependent CLP protease proteolytic subunitchromosome CDS4585088 624 - 0.467949
clpX BF3893 putative ATP-dependent CLP protease ATP-binding subunitchromosome CDS4583838 1248 - 0.485577
dnaJ BF1818 putative chaperone proteinchromosome CDS2124358 1185 - 0.473418
dnaK1 BF0623 putative chaperone proteinchromosome CDS759650 1590 - 0.411321
dnaK2 BF1189 putative chaperone proteinchromosome CDS1445996 1920 + 0.444792
fklB BF4308 putative FkbP-type 22 kDa peptidyl-prolyl cis-trans isomerasechromosome CDS5114765 585 + 0.451282
groEL BF3222 60 kDa chaperoninchromosome CDS3787952 1638 - 0.437118
groES BF3223 10 kDa chaperoninchromosome CDS3789632 273 - 0.410256
grpE BF1819 putative GrpE protein (HSP70 cofactor)chromosome CDS2125594 588 - 0.433673
htpG BF2491 chaperone proteinchromosome CDS2894220 2046 - 0.407625
htpX BF1952 putative transmembrane protease HtpX homologchromosome CDS2278024 969 - 0.429309
lon BF2393 ATP-dependent proteasechromosome CDS2793008 2469 - 0.443499
pdiA BF1378 conserved hypothetical proteinchromosome CDS1645958 597 + 0.460637
pepO BF3918 putative endopeptidasechromosome CDS4615594 2034 - 0.457719
pflA BF1322 putative pyruvate formate-lyase 1 activating enzymechromosome CDS1585626 726 - 0.444904
radA BF0555 putative DNA repair proteinchromosome CDS660845 1368 - 0.522661
sppA BF3272 putative protease IVchromosome CDS3858437 1779 + 0.435076
tpx BF2777 putative thiol peroxidasechromosome CDS3236634 501 - 0.48503
trxA BF0642 putative thioredoxinchromosome CDS778479 315 + 0.387302
trxB BF0952 putative thioredoxin reductasechromosome CDS1188719 948 + 0.46519
ubb BF3883 putative ubiquitinchromosome CDS4570311 231 + 0.311688