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2024-05-04 08:34:46

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Organism: Dechloromonas aromatica RCB, RCB

Number of genes found: 175

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Dechloromonas aromatica RCB, RCB
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Daro_2154 Heat shock protein DnaJ, N-terminal:Protein of unknown function DUF898, transmembrane bacterialchromosome CDS2323950 1236 + 0.554207
NA Daro_1889 Methionine sulfoxide reductase Bchromosome CDS2029754 399 - 0.593985
NA Daro_1739 Protein-P-II uridylyltransferasechromosome CDS1869078 2559 - 0.581086
NA Daro_2442 Peptidase S1 and S6, chymotrypsin/Hapchromosome CDS2643058 780 + 0.508974
NA Daro_2097 Radical SAMchromosome CDS2256643 795 + 0.636478
NA Daro_4050 Radical SAMchromosome CDS4349951 639 - 0.594679
NA Daro_3636 Heat shock protein DnaJ, N-terminalchromosome CDS3909247 279 - 0.591398
NA Daro_2279 hypothetical proteinchromosome CDS2464860 393 - 0.659033
NA Daro_3985 Hydrogenase expression/formation protein (HUPF/HYPC)chromosome CDS4281454 303 - 0.617162
NA Daro_3772 TPR repeatchromosome CDS4057080 1218 - 0.590312
NA Daro_1933 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS2078466 1887 + 0.563328
NA Daro_1796 Peptidase U32chromosome CDS1932366 1890 - 0.595238
NA Daro_3587 conserved hypothetical proteinchromosome CDS3841826 555 + 0.61982
NA Daro_2067 OsmC-like proteinchromosome CDS2224599 426 + 0.577465
NA Daro_2467 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminalchromosome CDS2667973 1008 - 0.606151
NA Daro_2383 hypothetical proteinchromosome CDS2568851 1077 - 0.625812
NA Daro_0651 hypothetical proteinchromosome CDS712604 735 + 0.544218
NA Daro_3692 Sulphate transport system permease protein 2:Sulfate ABC transporter, permease protein CysTchromosome CDS3968112 876 - 0.607306
NA Daro_3998 Cytochrome C biogenesis proteinchromosome CDS4296885 489 + 0.609407
NA Daro_3992 Cytochrome c-type biogenesis protein CcmBchromosome CDS4292244 669 + 0.638266
NA Daro_1195 Arginine-tRNA-protein transferase, N-terminal:Arginine-tRNA-protein transferase, C-terminalchromosome CDS1299163 744 - 0.594086
NA Daro_2662 conserved hypothetical proteinchromosome CDS2856104 867 + 0.620531
NA Daro_3088 SirA-likechromosome CDS3329352 228 - 0.504386
NA Daro_1717 ClpX, ATPase regulatory subunitchromosome CDS1845157 1263 - 0.576405
NA Daro_0637 Peptidase A24A, prepilin type IV:Peptidase A24A, N-terminalchromosome CDS699018 855 - 0.575439
NA Daro_1090 Glutathione peroxidasechromosome CDS1195052 483 + 0.592133
NA Daro_2058 Heat shock protein DnaJ, N-terminalchromosome CDS2215996 327 + 0.495413
NA Daro_1719 Trigger factorchromosome CDS1847131 1305 - 0.586973
NA Daro_4092 possible signal peptide proteinchromosome CDS4388747 471 + 0.619958
NA Daro_0426 Chaperonin Cpn60/TCP-1chromosome CDS468734 1653 + 0.600726
NA Daro_4167 Cytochrome c biogenesis protein, transmembrane regionchromosome CDS4465782 1761 + 0.641681
NA Daro_3518 FAD-dependent pyridine nucleotide-disulphide oxidoreductase:Pyridine nucleotide-disulphide oxidoreductase, class-II, active sitechromosome CDS3767794 1566 + 0.616858
NA Daro_3289 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminalchromosome CDS3540764 609 + 0.587849
NA Daro_2024 Peptidase S1C, Dochromosome CDS2176721 1422 + 0.545007
NA Daro_1954 Fe-S protein assembly chaperone HscAchromosome CDS2105259 1890 + 0.616402
NA Daro_0923 Heat shock protein Hsp70chromosome CDS1000169 1938 - 0.603199
NA Daro_3774 thiol-disulfide isomerase-like proteinchromosome CDS4058776 522 - 0.534483
NA Daro_3999 TPR repeatchromosome CDS4297370 840 + 0.589286
NA Daro_1716 Peptidase S16, ATP-dependent protease Lachromosome CDS1842675 2415 - 0.6
NA Daro_0713 Cytochrome c oxidase cbb3-type, subunit Ichromosome CDS783587 1428 + 0.551821
NA Daro_3996 Cytochrome c-type biogenesis protein CcmFchromosome CDS4294313 1995 + 0.619048
NA Daro_1462 Cytochrome oxidase assemblychromosome CDS1587233 1047 - 0.6915
NA Daro_3517 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS3767108 564 + 0.588652
NA Daro_3658 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS3930680 1317 - 0.603645
NA Daro_0050 Mg chelatase-related proteinchromosome CDS59706 1497 - 0.635939
NA Daro_0023 Peptidase M48, Ste24pchromosome CDS28557 843 + 0.616845
NA Daro_0715 Cbb3-type cytochrome oxidase componentchromosome CDS785672 177 + 0.548023
NA Daro_2523 Protein-L-isoaspartate(D-aspartate)O-methyltrans ferasechromosome CDS2720857 651 - 0.556068
NA Daro_2061 hypothetical proteinchromosome CDS2218240 732 + 0.605191
NA Daro_0748 Flageller protein FlgAchromosome CDS819345 678 - 0.587021
NA Daro_1589 conserved hypothetical proteinchromosome CDS1705644 549 - 0.568306
NA Daro_2349 Peptidylprolyl isomerase, FKBP-typechromosome CDS2531318 501 - 0.568862
NA Daro_2342 SmpB proteinchromosome CDS2523196 450 + 0.531111
NA Daro_2997 Thioredoxinchromosome CDS3235947 327 + 0.550459
NA Daro_2025 Glutaredoxin 2chromosome CDS2178135 243 + 0.497942
NA Daro_2155 Peptidase M48, Ste24pchromosome CDS2325185 984 + 0.609756
NA Daro_2635 conserved hypothetical proteinchromosome CDS2834630 411 - 0.588808
NA Daro_0612 Glutaredoxin, GrxCchromosome CDS681092 261 + 0.590038
NA Daro_3452 suppressor for copper-sensitivity D, putativechromosome CDS3702072 510 + 0.611765
NA Daro_1463 Protoheme IX farnesyltransferasechromosome CDS1588286 897 - 0.662207
NA Daro_0204 Heat shock protein HslUchromosome CDS219783 1341 + 0.574198
NA Daro_1953 Co-chaperone Hsc20chromosome CDS2104728 528 + 0.57197
NA Daro_0648 OsmC-like proteinchromosome CDS710596 429 - 0.540793
NA Daro_2948 thiol-disulfide isomerase and thioredoxinschromosome CDS3184558 240 - 0.5
NA Daro_2748 Hsp33 proteinchromosome CDS2942175 882 + 0.617914
NA Daro_2651 periplasmic thiol:disulfide interchange proteinchromosome CDS2845863 819 + 0.60928
NA Daro_3993 Cytochrome c-type biogenesis protein CcmCchromosome CDS4292909 747 + 0.605087
NA Daro_1424 Urease accessory protein UreGchromosome CDS1551671 606 - 0.615512
NA Daro_0179 Peptidase U32chromosome CDS196780 1272 - 0.617925
NA Daro_4190 putative thioredoxinchromosome CDS4486887 330 - 0.618182
NA Daro_0293 Peptidase M48, Ste24p:HtpX, N-terminalchromosome CDS334429 879 + 0.612059
NA Daro_3966 Hydrogenase formation HypD proteinchromosome CDS4264035 1125 - 0.626667
NA Daro_0990 Peptidylprolyl isomerase, FKBP-typechromosome CDS1084521 408 + 0.563725
NA Daro_0630 Heat shock protein Hsp20chromosome CDS694534 417 - 0.515588
NA Daro_1293 Thioredoxin reductasechromosome CDS1402896 963 - 0.603323
NA Daro_0563 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS626526 666 - 0.569069
NA Daro_3978 Hydrogenase accessory protein HypBchromosome CDS4277118 1059 - 0.630784
NA Daro_1382 Glutathione S-transferase, N-terminalchromosome CDS1514255 639 + 0.600939
NA Daro_1718 Peptidase S14, ClpPchromosome CDS1846434 630 - 0.584127
NA Daro_0261 Protein of unknown function DUF107chromosome CDS303705 441 - 0.61678
NA Daro_2611 conserved hypothetical proteinchromosome CDS2811949 399 + 0.606516
NA Daro_3984 Hydrogenase-1 expression HyaEchromosome CDS4280999 459 - 0.636166
NA Daro_2318 periplasmic thiol:disulfide interchange proteinchromosome CDS2498580 819 + 0.619048
NA Daro_3965 Hydrogenase expression/formation protein HypEchromosome CDS4262990 993 - 0.63142
NA Daro_0203 20S proteasome, A and B subunitschromosome CDS219250 537 + 0.608939
NA Daro_3509 putative thiol:disulphide interchange protein (periplasmic)chromosome CDS3760019 702 - 0.541311
NA Daro_3997 Periplasmic protein thiol:disulfide oxidoreductase DsbEchromosome CDS4296304 585 + 0.603419
NA Daro_3602 AAA ATPase, central regionchromosome CDS3864494 1347 - 0.682257
NA Daro_0915 Peptidyl-prolyl cis-trans isomerase, cyclophilin typechromosome CDS991120 492 - 0.575203
NA Daro_0425 Chaperonin Cpn10chromosome CDS468403 291 + 0.594502
NA Daro_0916 Peptidyl-prolyl cis-trans isomerase, cyclophilin typechromosome CDS991621 573 - 0.544503
NA Daro_3953 Heat shock protein DnaJ, N-terminalchromosome CDS4248868 789 - 0.614702
NA Daro_0348 ABC transporter, transmembrane region:ABC transporter relatedchromosome CDS381320 1818 - 0.574807
NA Daro_0488 Glutathione peroxidasechromosome CDS550893 558 + 0.5681
NA Daro_2362 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS2547053 471 - 0.539278
NA Daro_3683 Glutaredoxin-related proteinchromosome CDS3958021 321 - 0.566978
NA Daro_1969 Radical SAMchromosome CDS2118655 1113 - 0.62354
NA Daro_1912 conserved hypothetical proteinchromosome CDS2055161 549 + 0.639344
NA Daro_0108 Peptidase U32chromosome CDS124357 903 - 0.607973
NA Daro_0532 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS592197 501 - 0.644711
NA Daro_1447 ADP-ribosylation/Crystallin J1chromosome CDS1576996 981 - 0.658512
NA Daro_3331 Glutamate-ammonia ligase adenylyltransferasechromosome CDS3584342 2700 + 0.64
NA Daro_1839 cytochrome C biogenesis proteinchromosome CDS1978896 489 - 0.593047
NA Daro_1405 TPR repeatchromosome CDS1536142 1200 + 0.578333
NA Daro_0886 general secretion pathway protein Hchromosome CDS957786 852 + 0.566901
NA Daro_2727 AAA ATPase, central region:Clp, N terminalchromosome CDS2920219 2592 - 0.603395
NA Daro_3371 Peptidase S1 and S6, chymotrypsin/Hap:PDZ/DHR/GLGFchromosome CDS3630039 1152 + 0.633681
NA Daro_3002 Peptidase M48, Ste24pchromosome CDS3240357 1251 + 0.585931
NA Daro_0260 Band 7 proteinchromosome CDS302832 861 - 0.608595
NA Daro_2277 protein-S-isoprenylcysteine methyltransferasechromosome CDS2463385 651 + 0.56682
NA Daro_3155 hypothetical proteinchromosome CDS3391500 372 + 0.602151
NA Daro_1223 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergenchromosome CDS1327452 489 - 0.543967
NA Daro_1103 glutaredoxin family proteinchromosome CDS1205241 393 + 0.580153
NA Daro_3864 Twin-arginine translocation pathway signalchromosome CDS4155040 657 - 0.564688
NA Daro_2717 OsmC-like proteinchromosome CDS2910166 408 + 0.595588
NA Daro_2623 thioredoxin:cytochrome c biogenesis protein transmembrane regionchromosome CDS2822706 453 - 0.525386
NA Daro_3469 Peptidylprolyl isomerase, FKBP-typechromosome CDS3718745 345 - 0.597101
NA Daro_3156 Cytochrome c biogenesis protein, transmembrane regionchromosome CDS3391888 729 + 0.648834
NA Daro_2329 conserved hypothetical proteinchromosome CDS2508785 864 + 0.62037
NA Daro_2278 Cytochrome c biogenesis protein, transmembrane regionchromosome CDS2464152 705 - 0.653901
NA Daro_0822 hypothetical proteinchromosome CDS893948 759 - 0.467721
NA Daro_3951 AAA ATPase, central regionchromosome CDS4247483 981 + 0.643221
NA Daro_1981 Peptidase M22, glycoproteasechromosome CDS2130902 690 + 0.630435
NA Daro_0702 Redox-active disulfide protein 2chromosome CDS770434 234 + 0.57265
NA Daro_3145 Disulphide bond formation protein DsbBchromosome CDS3384814 498 - 0.582329
NA Daro_3532 Methionine sulfoxide reductase Achromosome CDS3783541 549 - 0.588342
NA Daro_0231 ClpX, ATPase regulatory subunitchromosome CDS258754 1083 - 0.608495
NA Daro_3457 hypothetical proteinchromosome CDS3704740 1248 - 0.572917
NA Daro_3924 Protein-L-isoaspartate(D-aspartate) O-methyltransferase:O-methyltransferase, family 3chromosome CDS4220205 654 + 0.600917
NA Daro_1987 DNA repair protein RadAchromosome CDS2136368 1362 + 0.587372
NA Daro_3678 hypothetical proteinchromosome CDS3953669 384 - 0.617188
NA Daro_2009 Peptidase S49chromosome CDS2165074 963 + 0.541018
NA Daro_1893 Protein of unknown function DUF182chromosome CDS2034025 996 + 0.681727
NA Daro_3995 CcmE/CycJ proteinchromosome CDS4293849 462 + 0.614719
NA Daro_1196 Leucyl/phenylalanyl-tRNA--protein transferasechromosome CDS1299909 705 - 0.607092
NA Daro_3969 Hydrogenase expression/formation protein (HUPF/HYPC)chromosome CDS4266001 291 - 0.611684
NA Daro_3428 molecular chaperone-like proteinchromosome CDS3682014 447 + 0.501119
NA Daro_1393 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS1523028 816 - 0.602941
NA Daro_3095 AAA ATPase, central region:Clp, N terminalchromosome CDS3333275 2262 + 0.581344
NA Daro_2906 PpiC-type peptidyl-prolyl cis-trans isomerasechromosome CDS3129394 792 + 0.607323
NA Daro_0109 Peptidase U32chromosome CDS125273 1008 - 0.62004
NA Daro_2655 conserved hypothetical proteinchromosome CDS2850196 591 + 0.646362
NA Daro_0781 Flagellar protein FliSchromosome CDS847242 408 - 0.563725
NA Daro_2978 HflKchromosome CDS3215814 1311 - 0.588101
NA Daro_0530 Peptidase M22, glycoproteasechromosome CDS590723 1077 + 0.6026
NA Daro_0757 Mannosyl-glycoproteinendo-beta-N-acetylglucosamidasechromosome CDS826422 975 + 0.589744
NA Daro_3647 hypothetical proteinchromosome CDS3921310 489 + 0.613497
NA Daro_0928 Thioredoxinchromosome CDS1007053 444 - 0.614865
NA Daro_1430 Urease accessory protein UreDchromosome CDS1555826 867 - 0.648212
NA Daro_1425 Urease accessory protein UreFchromosome CDS1552281 687 - 0.624454
NA Daro_0474 Peptidase M48, Ste24pchromosome CDS534258 786 + 0.601781
NA Daro_1815 Formate dehydrogenase accessory proteinchromosome CDS1950902 909 - 0.633663
NA Daro_3044 Peptidylprolyl isomerase, FKBP-typechromosome CDS3287546 432 - 0.594907
NA Daro_2171 AAA ATPase, central region:Clp, N terminalchromosome CDS2343212 2700 - 0.615926
NA Daro_1426 UreE urease accessory, N-terminal:UreE urease accessory, C-terminalchromosome CDS1552964 528 - 0.649621
NA Daro_1127 Heat shock protein Hsp90:ATP-binding region, ATPase-likechromosome CDS1232979 1911 + 0.567242
NA Daro_3991 Heme exporter protein CcmAchromosome CDS4291616 615 + 0.622764
NA Daro_1561 thioredoxinchromosome CDS1675047 495 - 0.541414
NA Daro_3967 Hydrogenase expression/formation protein (HUPF/HYPC)chromosome CDS4265159 246 - 0.613821
NA Daro_0769 Flagellar FliJ and relatedchromosome CDS836356 456 - 0.539474
NA Daro_1468 Cytochrome c oxidase assembly protein CtaG/Cox11chromosome CDS1591605 612 - 0.661765
NA Daro_0922 Heat shock protein DnaJchromosome CDS998949 1137 - 0.60774
NA Daro_2956 Cytochrome c biogenesis protein, transmembrane regionchromosome CDS3193500 669 + 0.702541
NA Daro_3977 Hydrogenase maturation protein HypFchromosome CDS4274819 2292 - 0.650087
NA Daro_0944 Peptidase M41, FtsHchromosome CDS1023916 1881 + 0.573631
NA Daro_1926 conserved hypothetical proteinchromosome CDS2073316 624 + 0.544872
NA Daro_2376 Thioredoxin-relatedchromosome CDS2559532 861 + 0.627178
NA Daro_1900 Peptidase S1C, Dochromosome CDS2042669 1470 - 0.629932
NA Daro_1552 putative lipoprotein transmembranechromosome CDS1663246 576 + 0.651042
NA Daro_4176 conserved hypothetical proteinchromosome CDS4473377 570 + 0.575439
NA Daro_0812 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminalchromosome CDS881325 597 + 0.539364
NA Daro_0924 GrpE proteinchromosome CDS1002174 555 - 0.594595
NA Daro_3583 Fe(II) trafficking protein YggXchromosome CDS3837917 273 - 0.59707
NA Daro_2065 Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminalchromosome CDS2222801 948 - 0.624473
NA Daro_2977 HflCchromosome CDS3214927 888 - 0.545045